RNA–Protein interactions for RNA: ENST00000533910.5

CHKA-208, Transcript of choline kinase alpha, humanhuman

TSL 3

Gene CHKA, Length 864 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-208ENST00000533910 C12orf50Q8NA57 414 aaPredicted RBP6.4□□□□□ -1.38
CHKA-208ENST00000533910 TBCKQ8TEA7 893 aa6.4□□□□□ -1.38
CHKA-208ENST00000533910 MBOAT7Q96N66 472 aa6.4□□□□□ -1.38
CHKA-208ENST00000533910 WRNIP1Q96S55 665 aa6.4□□□□□ -1.38
CHKA-208ENST00000533910 FEZ1Q99689 392 aa6.4□□□□□ -1.38
CHKA-208ENST00000533910 PYM1Q9BRP8 204 aaKnown RBP6.4□□□□□ -1.38
CHKA-208ENST00000533910 TMEM60Q9H2L4 133 aa6.4□□□□□ -1.38
CHKA-208ENST00000533910 TPSG1Q9NRR2 321 aa6.4□□□□□ -1.38
CHKA-208ENST00000533910 USP25Q9UHP3 1055 aa6.4□□□□□ -1.38
CHKA-208ENST00000533910 TUBE1Q9UJT0 475 aa6.4□□□□□ -1.38
CHKA-208ENST00000533910 ABCB11O95342 1321 aa6.4□□□□□ -1.39
CHKA-208ENST00000533910 UTRNP46939 3433 aa6.39□□□□□ -1.39
CHKA-208ENST00000533910 LCTP09848 1927 aa6.39□□□□□ -1.39
CHKA-208ENST00000533910 CYP3A7-CYP3A51PA0A087WV96 503 aa6.39□□□□□ -1.39
CHKA-208ENST00000533910 A0A087X0B3 334 aa6.39□□□□□ -1.39
CHKA-208ENST00000533910 C9IYK1 514 aa6.39□□□□□ -1.39
CHKA-208ENST00000533910 POLR2DO15514 142 aaKnown RBP6.39□□□□□ -1.39
CHKA-208ENST00000533910 SLC37A4O43826 429 aa6.39□□□□□ -1.39
CHKA-208ENST00000533910 UBOX5O94941 541 aa6.39□□□□□ -1.39
CHKA-208ENST00000533910 FOSP01100 380 aaPredicted RBP6.39□□□□□ -1.39
CHKA-208ENST00000533910 FAM153BP0C7A2 387 aa6.39□□□□□ -1.39
CHKA-208ENST00000533910 ELNP15502 786 aa6.39□□□□□ -1.39
CHKA-208ENST00000533910 VCAM1P19320 739 aa6.39□□□□□ -1.39
CHKA-208ENST00000533910 CYP3A7P24462 503 aa6.39□□□□□ -1.39
CHKA-208ENST00000533910 ITGB7P26010 798 aa6.39□□□□□ -1.39
CHKA-208ENST00000533910 BACE1P56817 501 aa6.39□□□□□ -1.39
CHKA-208ENST00000533910 NRG1Q02297 640 aaPredicted RBP6.39□□□□□ -1.39
CHKA-208ENST00000533910 IKQ13123 557 aaPredicted RBP6.39□□□□□ -1.39
CHKA-208ENST00000533910 SLBPQ14493 270 aaKnown RBP eCLIP6.39□□□□□ -1.39
CHKA-208ENST00000533910 LETM2Q2VYF4 491 aa6.39□□□□□ -1.39
CHKA-208ENST00000533910 LONRF3Q496Y0 759 aa6.39□□□□□ -1.39
CHKA-208ENST00000533910 ANO6Q4KMQ2 910 aa6.39□□□□□ -1.39
CHKA-208ENST00000533910 SPECC1Q5M775 1068 aa6.39□□□□□ -1.39
CHKA-208ENST00000533910 NT5DC1Q5TFE4 455 aa6.39□□□□□ -1.39
CHKA-208ENST00000533910 USP50Q70EL3 339 aaPredicted RBP6.39□□□□□ -1.39
CHKA-208ENST00000533910 TAB3Q8N5C8 712 aaPredicted RBP6.39□□□□□ -1.39
CHKA-208ENST00000533910 RNF214Q8ND24 703 aa6.39□□□□□ -1.39
CHKA-208ENST00000533910 ISL2Q96A47 359 aa6.39□□□□□ -1.39
CHKA-208ENST00000533910 EPSTI1Q96J88 318 aa6.39□□□□□ -1.39
CHKA-208ENST00000533910 PDLIM2Q96JY6 352 aa6.39□□□□□ -1.39
CHKA-208ENST00000533910 AK8Q96MA6 479 aa6.39□□□□□ -1.39
CHKA-208ENST00000533910 SLC6A18Q96N87 628 aa6.39□□□□□ -1.39
CHKA-208ENST00000533910 MTMR9Q96QG7 549 aa6.39□□□□□ -1.39
CHKA-208ENST00000533910 PPP1R9BQ96SB3 815 aa6.39□□□□□ -1.39
CHKA-208ENST00000533910 P2RX7Q99572 595 aaKnown RBP6.39□□□□□ -1.39
CHKA-208ENST00000533910 NAP1L4Q99733 375 aaKnown RBP6.39□□□□□ -1.39
CHKA-208ENST00000533910 SLF1Q9BQI6 1058 aa6.39□□□□□ -1.39
CHKA-208ENST00000533910 SDF4Q9BRK5 362 aa6.39□□□□□ -1.39
CHKA-208ENST00000533910 ANO3Q9BYT9 981 aa6.39□□□□□ -1.39
CHKA-208ENST00000533910 CCSER1Q9C0I3 900 aa6.39□□□□□ -1.39
CHKA-208ENST00000533910 AS3MTQ9HBK9 375 aa6.39□□□□□ -1.39
CHKA-208ENST00000533910 FAM105AQ9NUU6 356 aa6.39□□□□□ -1.39
CHKA-208ENST00000533910 ANO10Q9NW15 660 aa6.39□□□□□ -1.39
CHKA-208ENST00000533910 ADAM30Q9UKF2 790 aa6.39□□□□□ -1.39
CHKA-208ENST00000533910 ZNF536O15090 1300 aa6.39□□□□□ -1.39
CHKA-208ENST00000533910 LOXHD1Q8IVV2 1947 aa6.38□□□□□ -1.39
CHKA-208ENST00000533910 GLTPD2A6NH11 291 aa6.38□□□□□ -1.39
CHKA-208ENST00000533910 C19orf81C9J6K1 198 aa6.38□□□□□ -1.39
CHKA-208ENST00000533910 ADM5C9JUS6 153 aa6.38□□□□□ -1.39
CHKA-208ENST00000533910 PPP1R12AO14974 1030 aaPredicted RBP6.38□□□□□ -1.39
CHKA-208ENST00000533910 FANCGO15287 622 aa6.38□□□□□ -1.39
CHKA-208ENST00000533910 SUSD5O60279 629 aa6.38□□□□□ -1.39
CHKA-208ENST00000533910 CCNT1O60563 726 aaKnown RBP6.38□□□□□ -1.39
CHKA-208ENST00000533910 TDP2O95551 362 aa6.38□□□□□ -1.39
CHKA-208ENST00000533910 ICAM1P05362 532 aa6.38□□□□□ -1.39
CHKA-208ENST00000533910 CIITAP33076 1130 aa6.38□□□□□ -1.39
CHKA-208ENST00000533910 EPHX2P34913 555 aa6.38□□□□□ -1.39
CHKA-208ENST00000533910 SREBF1P36956 1147 aa6.38□□□□□ -1.39
CHKA-208ENST00000533910 USP11P51784 963 aa6.38□□□□□ -1.39
CHKA-208ENST00000533910 SNAP25P60880 206 aa6.38□□□□□ -1.39
CHKA-208ENST00000533910 SOX4Q06945 474 aaPredicted RBP6.38□□□□□ -1.39
CHKA-208ENST00000533910 CCDC173Q0VFZ6 552 aa6.38□□□□□ -1.39
CHKA-208ENST00000533910 PNOCQ13519 176 aa6.38□□□□□ -1.39
CHKA-208ENST00000533910 POSTNQ15063 836 aa6.38□□□□□ -1.39
CHKA-208ENST00000533910 DPCR1Q3MIW9 517 aa6.38□□□□□ -1.39
CHKA-208ENST00000533910 USH1GQ495M9 461 aa6.38□□□□□ -1.39
CHKA-208ENST00000533910 PRAMEF18Q5VWM3 479 aa6.38□□□□□ -1.39
CHKA-208ENST00000533910 PRAMEF13Q5VWM6 474 aa6.38□□□□□ -1.39
CHKA-208ENST00000533910 USP17L6PQ6QN14 398 aa6.38□□□□□ -1.39
CHKA-208ENST00000533910 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.38□□□□□ -1.39
CHKA-208ENST00000533910 C11orf57Q6ZUT1 292 aaPredicted RBP6.38□□□□□ -1.39
CHKA-208ENST00000533910 HID1Q8IV36 788 aa6.38□□□□□ -1.39
CHKA-208ENST00000533910 CEP57L1Q8IYX8 460 aa6.38□□□□□ -1.39
CHKA-208ENST00000533910 IGSF22Q8N9C0 903 aa6.38□□□□□ -1.39
CHKA-208ENST00000533910 PRPF38AQ8NAV1 312 aaKnown RBP6.38□□□□□ -1.39
CHKA-208ENST00000533910 CNNM3Q8NE01 707 aa6.38□□□□□ -1.39
CHKA-208ENST00000533910 SPATA20Q8TB22 786 aa6.38□□□□□ -1.39
CHKA-208ENST00000533910 ZNF507Q8TCN5 953 aa6.38□□□□□ -1.39
CHKA-208ENST00000533910 ZKSCAN4Q969J2 545 aaPredicted RBP6.38□□□□□ -1.39
CHKA-208ENST00000533910 DCPSQ96C86 337 aaKnown RBP6.38□□□□□ -1.39
CHKA-208ENST00000533910 BPIFA3Q9BQP9 254 aa6.38□□□□□ -1.39
CHKA-208ENST00000533910 SLC38A10Q9HBR0 1119 aa6.38□□□□□ -1.39
CHKA-208ENST00000533910 FBXO28Q9NVF7 368 aa6.38□□□□□ -1.39
CHKA-208ENST00000533910 HOOK1Q9UJC3 728 aaKnown RBP6.38□□□□□ -1.39
CHKA-208ENST00000533910 PNMA2Q9UL42 364 aa6.38□□□□□ -1.39
CHKA-208ENST00000533910 ZNF214Q9UL59 606 aaPredicted RBP6.38□□□□□ -1.39
CHKA-208ENST00000533910 ACTL7BQ9Y614 415 aa6.38□□□□□ -1.39
CHKA-208ENST00000533910 PTCH2Q9Y6C5 1203 aa6.38□□□□□ -1.39
CHKA-208ENST00000533910 FRMPD4Q14CM0 1322 aa6.38□□□□□ -1.39
CHKA-208ENST00000533910 MYPNQ86TC9 1320 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms