RNA–Protein interactions for RNA: ENST00000533834.1

RNPC3-209, Transcript of RNA binding region (RNP1, RRM) containing 3, humanhuman

TSL 1 (best)

Gene RNPC3, Length 3,658 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNPC3-209ENST00000533834 FAM178BQ8IXR5 827 aa7.73□□□□□ -1.17
RNPC3-209ENST00000533834 DDX27Q96GQ7 796 aaKnown RBP7.73□□□□□ -1.17
RNPC3-209ENST00000533834 CCDC43Q96MW1 224 aaKnown RBP7.73□□□□□ -1.17
RNPC3-209ENST00000533834 JPH2Q9BR39 696 aaPredicted RBP7.73□□□□□ -1.17
RNPC3-209ENST00000533834 LRRC19Q9H756 370 aa7.73□□□□□ -1.17
RNPC3-209ENST00000533834 APOBEC3GQ9HC16 384 aaKnown RBP7.73□□□□□ -1.17
RNPC3-209ENST00000533834 ALG6Q9Y672 507 aa7.73□□□□□ -1.17
RNPC3-209ENST00000533834 TTLL13PA6NNM8 815 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 PES1O00541 588 aaKnown RBP7.72□□□□□ -1.17
RNPC3-209ENST00000533834 FSCN2O14926 492 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 MMEP08473 750 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 PYGMP11217 842 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 PROZP22891 400 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 GCAP28676 217 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 MKRN4PQ13434 485 aaPredicted RBP7.72□□□□□ -1.17
RNPC3-209ENST00000533834 RPS6KA1Q15418 735 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 PTGISQ16647 500 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 TDRD12Q587J7 1177 aaKnown RBP7.72□□□□□ -1.17
RNPC3-209ENST00000533834 HAUS6Q7Z4H7 955 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 PACS2Q86VP3 889 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 GPRASP2Q96D09 838 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 FAM212AQ96EL1 285 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 ZNF341Q9BYN7 854 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 MTFR1LQ9H019 292 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 TMEM206Q9H813 350 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 TBC1D22BQ9NU19 505 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 DNAH12Q6ZR08 3092 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 SCN4AP35499 1836 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 CCDC66A2RUB6 948 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 C3orf70A6NLC5 250 aaPredicted RBP7.72□□□□□ -1.17
RNPC3-209ENST00000533834 TRAPPC3O43617 180 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 RTN2O75298 545 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 SSBP05455 408 aaKnown RBP eCLIP7.72□□□□□ -1.17
RNPC3-209ENST00000533834 PAK2Q13177 524 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 QPCTQ16769 361 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 AGBL2Q5U5Z8 902 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 PLA2G4FQ68DD2 849 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 PCMTD1Q96MG8 357 aaPredicted RBP7.72□□□□□ -1.17
RNPC3-209ENST00000533834 TANGO6Q9C0B7 1094 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 DEF6Q9H4E7 631 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 DHX33Q9H6R0 707 aaKnown RBP7.72□□□□□ -1.17
RNPC3-209ENST00000533834 TOPORSQ9NS56 1045 aaPredicted RBP7.72□□□□□ -1.17
RNPC3-209ENST00000533834 CYP39A1Q9NYL5 469 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 PLAAQ9Y263 795 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 AFG3L2Q9Y4W6 797 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 O00370 1275 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 DAPK3O43293 454 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 CHMP2AO43633 222 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 CYP11B1P15538 503 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 PTPRAP18433 802 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 LSP1P33241 339 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 RPL21P46778 160 aaKnown RBP7.72□□□□□ -1.17
RNPC3-209ENST00000533834 GCNT1Q02742 428 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 ARID5AQ03989 594 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 EN1Q05925 392 aaPredicted RBP7.72□□□□□ -1.17
RNPC3-209ENST00000533834 TRAF1Q13077 416 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 MTMR1Q13613 665 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 DLGAP5Q15398 846 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 TAZQ16635 292 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 CLEC16AQ2KHT3 1053 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 CCDC60Q8IWA6 550 aaPredicted RBP7.72□□□□□ -1.17
RNPC3-209ENST00000533834 OR2W6PQ8NHA6 318 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 POP1Q99575 1024 aaKnown RBP7.72□□□□□ -1.17
RNPC3-209ENST00000533834 MOV10L1Q9BXT6 1211 aaKnown RBP7.72□□□□□ -1.17
RNPC3-209ENST00000533834 NIFKQ9BYG3 293 aaKnown RBP7.72□□□□□ -1.17
RNPC3-209ENST00000533834 PLEKHA4Q9H4M7 779 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 TMEM8AQ9HCN3 771 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 SCAF8Q9UPN6 1271 aaKnown RBP7.72□□□□□ -1.17
RNPC3-209ENST00000533834 BCS1LQ9Y276 419 aa7.72□□□□□ -1.17
RNPC3-209ENST00000533834 GOLGA6CA6NDK9 693 aa7.71□□□□□ -1.17
RNPC3-209ENST00000533834 GOLGA6DP0CG33 693 aa7.71□□□□□ -1.17
RNPC3-209ENST00000533834 COPB2P35606 906 aa7.71□□□□□ -1.17
RNPC3-209ENST00000533834 MMP13P45452 471 aa7.71□□□□□ -1.17
RNPC3-209ENST00000533834 SOX10P56693 466 aa7.71□□□□□ -1.17
RNPC3-209ENST00000533834 CDR2Q01850 454 aa7.71□□□□□ -1.17
RNPC3-209ENST00000533834 CENPCQ03188 943 aa7.71□□□□□ -1.17
RNPC3-209ENST00000533834 SNRNP35Q16560 246 aaKnown RBP7.71□□□□□ -1.17
RNPC3-209ENST00000533834 ANKLE1Q8NAG6 615 aa7.71□□□□□ -1.17
RNPC3-209ENST00000533834 CENPTQ96BT3 561 aa7.71□□□□□ -1.17
RNPC3-209ENST00000533834 C18orf8Q96DM3 657 aa7.71□□□□□ -1.17
RNPC3-209ENST00000533834 ACCSQ96QU6 501 aa7.71□□□□□ -1.17
RNPC3-209ENST00000533834 ERP44Q9BS26 406 aa7.71□□□□□ -1.17
RNPC3-209ENST00000533834 TRIM51Q9BSJ1 452 aa7.71□□□□□ -1.17
RNPC3-209ENST00000533834 TRIM7Q9C029 511 aa7.71□□□□□ -1.17
RNPC3-209ENST00000533834 C17orf75Q9HAS0 396 aa7.71□□□□□ -1.17
RNPC3-209ENST00000533834 RAVER2Q9HCJ3 691 aaKnown RBP7.71□□□□□ -1.17
RNPC3-209ENST00000533834 GOLGA6AQ9NYA3 693 aa7.71□□□□□ -1.17
RNPC3-209ENST00000533834 CCPG1Q9ULG6 757 aa7.71□□□□□ -1.17
RNPC3-209ENST00000533834 IGKV6-21A0A0C4DH24 114 aa7.71□□□□□ -1.18
RNPC3-209ENST00000533834 TBCAO75347 108 aaKnown RBP7.71□□□□□ -1.18
RNPC3-209ENST00000533834 FAM13AO94988 1023 aa7.71□□□□□ -1.18
RNPC3-209ENST00000533834 PSMC5P62195 406 aa7.71□□□□□ -1.18
RNPC3-209ENST00000533834 ZACNQ401N2 412 aa7.71□□□□□ -1.18
RNPC3-209ENST00000533834 CDCA2Q69YH5 1023 aaPredicted RBP7.71□□□□□ -1.18
RNPC3-209ENST00000533834 XXYLT1Q8NBI6 393 aa7.71□□□□□ -1.18
RNPC3-209ENST00000533834 TAS1R2Q8TE23 839 aa7.71□□□□□ -1.18
RNPC3-209ENST00000533834 U2AF1L4Q8WU68 220 aaKnown RBP7.71□□□□□ -1.18
RNPC3-209ENST00000533834 FAM84AQ96KN4 292 aa7.71□□□□□ -1.18
RNPC3-209ENST00000533834 KIFC3Q9BVG8 833 aa7.71□□□□□ -1.18
RNPC3-209ENST00000533834 EPN3Q9H201 632 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms