RNA–Protein interactions for RNA: ENST00000533667.5

CTNND1-236, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 4,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-236ENST00000533667 PHF20Q9BVI0 1012 aa7.43□□□□□ -1.22
CTNND1-236ENST00000533667 STK33Q9BYT3 514 aa7.43□□□□□ -1.22
CTNND1-236ENST00000533667 USP27XA6NNY8 438 aa7.43□□□□□ -1.22
CTNND1-236ENST00000533667 KIF28PB7ZC32 967 aa7.43□□□□□ -1.22
CTNND1-236ENST00000533667 HNRNPCP07910 306 aaKnown RBP eCLIP7.43□□□□□ -1.229e-7■■■■□ 20.8
CTNND1-236ENST00000533667 SCP2P22307 547 aa7.43□□□□□ -1.22
CTNND1-236ENST00000533667 FOXO4P98177 505 aa7.43□□□□□ -1.22
CTNND1-236ENST00000533667 TRADDQ15628 312 aa7.43□□□□□ -1.22
CTNND1-236ENST00000533667 GPR162Q16538 588 aa7.43□□□□□ -1.22
CTNND1-236ENST00000533667 EDRF1Q3B7T1 1238 aa7.43□□□□□ -1.22
CTNND1-236ENST00000533667 DALRD3Q5D0E6 543 aaKnown RBP7.43□□□□□ -1.22
CTNND1-236ENST00000533667 AGBL2Q5U5Z8 902 aa7.43□□□□□ -1.22
CTNND1-236ENST00000533667 EGFL6Q8IUX8 553 aa7.43□□□□□ -1.22
CTNND1-236ENST00000533667 PPM1NQ8N819 430 aa7.43□□□□□ -1.22
CTNND1-236ENST00000533667 RNF25Q96BH1 459 aaPredicted RBP7.43□□□□□ -1.22
CTNND1-236ENST00000533667 MAP3K14Q99558 947 aa7.43□□□□□ -1.22
CTNND1-236ENST00000533667 VPS11Q9H270 941 aa7.43□□□□□ -1.22
CTNND1-236ENST00000533667 ETNK1Q9HBU6 452 aa7.43□□□□□ -1.22
CTNND1-236ENST00000533667 SRP68Q9UHB9 627 aaKnown RBP7.43□□□□□ -1.22
CTNND1-236ENST00000533667 INTUQ9ULD6 942 aa7.43□□□□□ -1.22
CTNND1-236ENST00000533667 G3BP2Q9UN86 482 aaKnown RBP7.43□□□□□ -1.22
CTNND1-236ENST00000533667 ARL2BPQ9Y2Y0 163 aa7.43□□□□□ -1.22
CTNND1-236ENST00000533667 SNX5Q9Y5X3 404 aa7.43□□□□□ -1.22
CTNND1-236ENST00000533667 LRRC7Q96NW7 1537 aa7.43□□□□□ -1.22
CTNND1-236ENST00000533667 ZCCHC11Q5TAX3 1644 aaKnown RBP7.43□□□□□ -1.22
CTNND1-236ENST00000533667 POTEFA5A3E0 1075 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 M0QYV0 167 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 NCK2O43639 380 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 POTEIP0CG38 1075 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 ITIH2P19823 946 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 NOP14P78316 857 aaKnown RBP7.42□□□□□ -1.22
CTNND1-236ENST00000533667 DPYDQ12882 1025 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 EFTUD2Q15029 972 aaKnown RBP eCLIP7.42□□□□□ -1.223e-8■■■■■ 29.5
CTNND1-236ENST00000533667 HP1BP3Q5SSJ5 553 aaPredicted RBP7.42□□□□□ -1.22
CTNND1-236ENST00000533667 POTEGQ6S5H5 508 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 POTEEQ6S8J3 1075 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 MTHFD1LQ6UB35 978 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 RCOR2Q8IZ40 523 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 CYTH2Q99418 400 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 TEX12Q9BXU0 123 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 EPN3Q9H201 632 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 ECT2Q9H8V3 914 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 ANLNQ9NQW6 1124 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 UBAP1Q9NZ09 502 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 CLTCL1P53675 1640 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 F5H6K3 240 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 PIK3R2O00459 728 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 PSMD3O43242 534 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 CYP19A1P11511 503 aaPredicted RBP7.42□□□□□ -1.22
CTNND1-236ENST00000533667 MDH1P40925 334 aaKnown RBP7.42□□□□□ -1.22
CTNND1-236ENST00000533667 GYS2P54840 703 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 CCZ1BP86790 482 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 CCZ1P86791 482 aaPredicted RBP7.42□□□□□ -1.22
CTNND1-236ENST00000533667 KLRC3Q07444 240 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 TTLL4Q14679 1199 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 DUOXA2Q1HG44 320 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 ANKRD40Q6AI12 368 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 MIGA2Q7L4E1 593 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 GLYCTKQ8IVS8 523 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 ZBED8Q8IZ13 594 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.42□□□□□ -1.22
CTNND1-236ENST00000533667 PARD3BQ8TEW8 1205 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 IFT43Q96FT9 208 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 ZNF560Q96MR9 790 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 RNF146Q9NTX7 359 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 HPCAL4Q9UM19 191 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 HEY1Q9Y5J3 304 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 PHF2O75151 1096 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 CDH16O75309 829 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 C12orf60Q5U649 245 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 HAUS6Q7Z4H7 955 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 SGSM3Q96HU1 749 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 ING2Q9H160 280 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 POLR3FQ9H1D9 316 aaPredicted RBP7.42□□□□□ -1.22
CTNND1-236ENST00000533667 PALMDQ9NP74 551 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 TMEM260Q9NX78 707 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 PSD3Q9NYI0 1048 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 GTSE1Q9NYZ3 720 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 EMSYQ7Z589 1322 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 CFAP69A5D8W1 941 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 MEFVO15553 781 aaPredicted RBP7.42□□□□□ -1.22
CTNND1-236ENST00000533667 SPAG6O75602 509 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 SLC4A1P02730 911 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 DDX5P17844 614 aaKnown RBP7.42□□□□□ -1.22
CTNND1-236ENST00000533667 VCAM1P19320 739 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 TPP2P29144 1249 aaPredicted RBP7.42□□□□□ -1.22
CTNND1-236ENST00000533667 HDAC4P56524 1084 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 CDC42EP1Q00587 391 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 ZNF211Q13398 564 aaPredicted RBP7.42□□□□□ -1.22
CTNND1-236ENST00000533667 NR1I3Q14994 352 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 HIF1AQ16665 826 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 SLC10A5Q5PT55 438 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 RARS2Q5T160 578 aaKnown RBP7.42□□□□□ -1.22
CTNND1-236ENST00000533667 SPATA21Q7Z572 469 aa7.42□□□□□ -1.22
CTNND1-236ENST00000533667 SYN2Q92777 582 aaPredicted RBP7.42□□□□□ -1.22
CTNND1-236ENST00000533667 ROPN1BQ9BZX4 212 aaPredicted RBP7.42□□□□□ -1.22
CTNND1-236ENST00000533667 ROPN1Q9HAT0 212 aaPredicted RBP7.42□□□□□ -1.22
CTNND1-236ENST00000533667 EML4Q9HC35 981 aaKnown RBP7.42□□□□□ -1.22
CTNND1-236ENST00000533667 RBAKQ9NYW8 714 aaPredicted RBP7.42□□□□□ -1.22
CTNND1-236ENST00000533667 HDAC6Q9UBN7 1215 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms