RNA–Protein interactions for RNA: ENST00000533196.1

SMPD1-209, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 3

Gene SMPD1, Length 425 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-209ENST00000533196 HERC2P3Q9BVR0 1158 aa25.89■■□□□ 1.74
SMPD1-209ENST00000533196 ADAM7Q9H2U9 754 aa25.89■■□□□ 1.74
SMPD1-209ENST00000533196 MRPL17Q9NRX2 175 aaKnown RBP25.89■■□□□ 1.74
SMPD1-209ENST00000533196 MARCH5Q9NX47 278 aa25.89■■□□□ 1.74
SMPD1-209ENST00000533196 MIOSQ9NXC5 875 aa25.89■■□□□ 1.74
SMPD1-209ENST00000533196 ARIH1Q9Y4X5 557 aaPredicted RBP25.89■■□□□ 1.74
SMPD1-209ENST00000533196 OR1G1P47890 313 aa25.88■■□□□ 1.73
SMPD1-209ENST00000533196 CDR2LQ86X02 465 aaPredicted RBP25.88■■□□□ 1.73
SMPD1-209ENST00000533196 GSTCDQ8NEC7 633 aa25.88■■□□□ 1.73
SMPD1-209ENST00000533196 SLC22A17Q8WUG5 538 aa25.88■■□□□ 1.73
SMPD1-209ENST00000533196 AUTS2Q8WXX7 1259 aa25.88■■□□□ 1.73
SMPD1-209ENST00000533196 COLEC11Q9BWP8 271 aa25.88■■□□□ 1.73
SMPD1-209ENST00000533196 PARP2Q9UGN5 583 aa25.88■■□□□ 1.73
SMPD1-209ENST00000533196 PHLPP2Q6ZVD8 1323 aa25.88■■□□□ 1.73
SMPD1-209ENST00000533196 LILRB3O75022 631 aa25.87■■□□□ 1.73
SMPD1-209ENST00000533196 EFEMP2O95967 443 aa25.87■■□□□ 1.73
SMPD1-209ENST00000533196 AKAP5P24588 427 aa25.87■■□□□ 1.73
SMPD1-209ENST00000533196 IL17AQ16552 155 aa25.87■■□□□ 1.73
SMPD1-209ENST00000533196 TMEM132AQ24JP5 1023 aa25.87■■□□□ 1.73
SMPD1-209ENST00000533196 ARL6IP4Q66PJ3 421 aaKnown RBP25.87■■□□□ 1.73
SMPD1-209ENST00000533196 RNF168Q8IYW5 571 aaPredicted RBP25.87■■□□□ 1.73
SMPD1-209ENST00000533196 RPS6KC1Q96S38 1066 aa25.87■■□□□ 1.73
SMPD1-209ENST00000533196 PDZD7Q9H5P4 517 aa25.87■■□□□ 1.73
SMPD1-209ENST00000533196 PRG3Q9Y2Y8 225 aaPredicted RBP25.87■■□□□ 1.73
SMPD1-209ENST00000533196 HCN4Q9Y3Q4 1203 aa25.87■■□□□ 1.73
SMPD1-209ENST00000533196 FAM86C2PA6NEL3 165 aa25.86■■□□□ 1.73
SMPD1-209ENST00000533196 URODP06132 367 aa25.86■■□□□ 1.73
SMPD1-209ENST00000533196 MTHFRP42898 656 aa25.86■■□□□ 1.73
SMPD1-209ENST00000533196 APBB1IPQ7Z5R6 666 aaPredicted RBP25.86■■□□□ 1.73
SMPD1-209ENST00000533196 GPR65Q8IYL9 337 aa25.86■■□□□ 1.73
SMPD1-209ENST00000533196 KLHL5Q96PQ7 755 aa25.86■■□□□ 1.73
SMPD1-209ENST00000533196 TIPINQ9BVW5 301 aa25.86■■□□□ 1.73
SMPD1-209ENST00000533196 MUTYHQ9UIF7 546 aa25.86■■□□□ 1.73
SMPD1-209ENST00000533196 E9PMD0 336 aa25.85■■□□□ 1.73
SMPD1-209ENST00000533196 DCAF4L1Q3SXM0 396 aa25.85■■□□□ 1.73
SMPD1-209ENST00000533196 HYIQ5T013 277 aa25.85■■□□□ 1.73
SMPD1-209ENST00000533196 LARP1BQ659C4 914 aaKnown RBP25.85■■□□□ 1.73
SMPD1-209ENST00000533196 RPGRIP1Q96KN7 1286 aa25.85■■□□□ 1.73
SMPD1-209ENST00000533196 DRC1Q96MC2 740 aa25.85■■□□□ 1.73
SMPD1-209ENST00000533196 RIPOR3Q96MK2 946 aa25.85■■□□□ 1.73
SMPD1-209ENST00000533196 MMTAG2Q9BU76 263 aaKnown RBP25.85■■□□□ 1.73
SMPD1-209ENST00000533196 NT5C3AQ9H0P0 336 aa25.85■■□□□ 1.73
SMPD1-209ENST00000533196 C17orf75Q9HAS0 396 aa25.85■■□□□ 1.73
SMPD1-209ENST00000533196 KCNG1Q9UIX4 513 aa25.85■■□□□ 1.73
SMPD1-209ENST00000533196 MYH11P35749 1972 aa25.84■■□□□ 1.73
SMPD1-209ENST00000533196 PP2D1A8MPX8 630 aa25.84■■□□□ 1.73
SMPD1-209ENST00000533196 EPCAMP16422 314 aa25.84■■□□□ 1.73
SMPD1-209ENST00000533196 GLUD2P49448 558 aa25.84■■□□□ 1.73
SMPD1-209ENST00000533196 APOL5Q9BWW9 433 aa25.84■■□□□ 1.73
SMPD1-209ENST00000533196 NR2E1Q9Y466 385 aa25.84■■□□□ 1.73
SMPD1-209ENST00000533196 TTLL13PA6NNM8 815 aa25.83■■□□□ 1.73
SMPD1-209ENST00000533196 K7ERI5 159 aa25.83■■□□□ 1.73
SMPD1-209ENST00000533196 SLC26A4O43511 780 aa25.83■■□□□ 1.73
SMPD1-209ENST00000533196 C1RP00736 705 aa25.83■■□□□ 1.73
SMPD1-209ENST00000533196 CNPP09543 421 aaKnown RBP25.83■■□□□ 1.73
SMPD1-209ENST00000533196 KLRC2P26717 231 aa25.83■■□□□ 1.73
SMPD1-209ENST00000533196 CDC25AP30304 524 aa25.83■■□□□ 1.73
SMPD1-209ENST00000533196 TUSC3Q13454 348 aa25.83■■□□□ 1.73
SMPD1-209ENST00000533196 RINT1Q6NUQ1 792 aa25.83■■□□□ 1.73
SMPD1-209ENST00000533196 EDAQ92838 391 aa25.83■■□□□ 1.73
SMPD1-209ENST00000533196 TMEM134Q9H6X4 195 aa25.83■■□□□ 1.73
SMPD1-209ENST00000533196 KLK14Q9P0G3 267 aa25.83■■□□□ 1.73
SMPD1-209ENST00000533196 DPP7Q9UHL4 492 aa25.83■■□□□ 1.73
SMPD1-209ENST00000533196 TECTAO75443 2155 aa25.83■■□□□ 1.73
SMPD1-209ENST00000533196 BMP15O95972 392 aa25.82■■□□□ 1.72
SMPD1-209ENST00000533196 SSBP05455 408 aaKnown RBP eCLIP25.82■■□□□ 1.72
SMPD1-209ENST00000533196 ADH1AP07327 375 aa25.82■■□□□ 1.72
SMPD1-209ENST00000533196 LIG1P18858 919 aa25.82■■□□□ 1.72
SMPD1-209ENST00000533196 CLCN4P51793 760 aa25.82■■□□□ 1.72
SMPD1-209ENST00000533196 DSG1Q02413 1049 aa25.82■■□□□ 1.72
SMPD1-209ENST00000533196 DMP1Q13316 513 aaPredicted RBP25.82■■□□□ 1.72
SMPD1-209ENST00000533196 ATAT1Q5SQI0 421 aa25.82■■□□□ 1.72
SMPD1-209ENST00000533196 KIAA0319Q5VV43 1072 aa25.82■■□□□ 1.72
SMPD1-209ENST00000533196 KIAA1841Q6NSI8 718 aa25.82■■□□□ 1.72
SMPD1-209ENST00000533196 C1orf186Q6ZWK4 172 aa25.82■■□□□ 1.72
SMPD1-209ENST00000533196 BRAPQ7Z569 592 aa25.82■■□□□ 1.72
SMPD1-209ENST00000533196 CABP7Q86V35 215 aa25.82■■□□□ 1.72
SMPD1-209ENST00000533196 AK8Q96MA6 479 aa25.82■■□□□ 1.72
SMPD1-209ENST00000533196 FBXL18Q96ME1 805 aa25.82■■□□□ 1.72
SMPD1-209ENST00000533196 KIFC3Q9BVG8 833 aa25.82■■□□□ 1.72
SMPD1-209ENST00000533196 SFXN1Q9H9B4 322 aa25.82■■□□□ 1.72
SMPD1-209ENST00000533196 RXFP1Q9HBX9 757 aa25.82■■□□□ 1.72
SMPD1-209ENST00000533196 SNTG2Q9NY99 539 aa25.82■■□□□ 1.72
SMPD1-209ENST00000533196 KCND2Q9NZV8 630 aa25.82■■□□□ 1.72
SMPD1-209ENST00000533196 RBM19Q9Y4C8 960 aaKnown RBP25.82■■□□□ 1.72
SMPD1-209ENST00000533196 HIP1RO75146 1068 aa25.81■■□□□ 1.72
SMPD1-209ENST00000533196 GUCY2CP25092 1073 aa25.81■■□□□ 1.72
SMPD1-209ENST00000533196 NPTX2P47972 431 aa25.81■■□□□ 1.72
SMPD1-209ENST00000533196 PEX3P56589 373 aa25.81■■□□□ 1.72
SMPD1-209ENST00000533196 CUL4AQ13619 759 aa25.81■■□□□ 1.72
SMPD1-209ENST00000533196 RARS2Q5T160 578 aaKnown RBP25.81■■□□□ 1.72
SMPD1-209ENST00000533196 ATF7IP2Q5U623 682 aa25.81■■□□□ 1.72
SMPD1-209ENST00000533196 ELMSAN1Q6PJG2 1045 aa25.81■■□□□ 1.72
SMPD1-209ENST00000533196 DAW1Q8N136 415 aa25.81■■□□□ 1.72
SMPD1-209ENST00000533196 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.81■■□□□ 1.72
SMPD1-209ENST00000533196 CHST7Q9NS84 486 aa25.81■■□□□ 1.72
SMPD1-209ENST00000533196 ARHGAP28Q9P2N2 729 aa25.81■■□□□ 1.72
SMPD1-209ENST00000533196 ADAM28Q9UKQ2 775 aa25.81■■□□□ 1.72
SMPD1-209ENST00000533196 TNFSF13BQ9Y275 285 aa25.81■■□□□ 1.72
SMPD1-209ENST00000533196 MTCL1Q9Y4B5 1905 aaKnown RBP25.8■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms