RNA–Protein interactions for RNA: ENST00000533058.5

TRAPPC4-212, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2 BASIC

Gene TRAPPC4, Length 1,209 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-212ENST00000533058 EIF2AQ9BY44 585 aaKnown RBP14.25□□□□□ -0.13
TRAPPC4-212ENST00000533058 ZHX3Q9H4I2 956 aa14.25□□□□□ -0.13
TRAPPC4-212ENST00000533058 NRDE2Q9H7Z3 1164 aa14.25□□□□□ -0.13
TRAPPC4-212ENST00000533058 POLD4Q9HCU8 107 aa14.25□□□□□ -0.13
TRAPPC4-212ENST00000533058 GIT1Q9Y2X7 761 aa14.25□□□□□ -0.13
TRAPPC4-212ENST00000533058 TCHHQ07283 1943 aa14.25□□□□□ -0.13
TRAPPC4-212ENST00000533058 PHLPP2Q6ZVD8 1323 aa14.24□□□□□ -0.13
TRAPPC4-212ENST00000533058 NPHP3-ACAD11A0A0J9YXS1 232 aa14.24□□□□□ -0.13
TRAPPC4-212ENST00000533058 HIP1RO75146 1068 aa14.24□□□□□ -0.13
TRAPPC4-212ENST00000533058 TBCAO75347 108 aaKnown RBP14.24□□□□□ -0.13
TRAPPC4-212ENST00000533058 GALTP07902 379 aa14.24□□□□□ -0.13
TRAPPC4-212ENST00000533058 NDUFA8P51970 172 aa14.24□□□□□ -0.13
TRAPPC4-212ENST00000533058 AMPD3Q01432 767 aa14.24□□□□□ -0.13
TRAPPC4-212ENST00000533058 CACNB1Q02641 598 aaPredicted RBP14.24□□□□□ -0.13
TRAPPC4-212ENST00000533058 DAW1Q8N136 415 aa14.24□□□□□ -0.13
TRAPPC4-212ENST00000533058 MICAL1Q8TDZ2 1067 aa14.24□□□□□ -0.13
TRAPPC4-212ENST00000533058 LRRC15Q8TF66 581 aa14.24□□□□□ -0.13
TRAPPC4-212ENST00000533058 TMEM169Q96HH4 297 aa14.24□□□□□ -0.13
TRAPPC4-212ENST00000533058 DRC1Q96MC2 740 aa14.24□□□□□ -0.13
TRAPPC4-212ENST00000533058 UHRF1Q96T88 793 aaPredicted RBP14.24□□□□□ -0.13
TRAPPC4-212ENST00000533058 TMEM175Q9BSA9 504 aa14.24□□□□□ -0.13
TRAPPC4-212ENST00000533058 TRIM6Q9C030 488 aaPredicted RBP14.24□□□□□ -0.13
TRAPPC4-212ENST00000533058 LRRC27Q9C0I9 530 aa14.24□□□□□ -0.13
TRAPPC4-212ENST00000533058 CUEDC2Q9H467 287 aa14.24□□□□□ -0.13
TRAPPC4-212ENST00000533058 GOLPH3LQ9H4A5 285 aa14.24□□□□□ -0.13
TRAPPC4-212ENST00000533058 CLDND1Q9NY35 253 aa14.24□□□□□ -0.13
TRAPPC4-212ENST00000533058 SERTAD1Q9UHV2 236 aa14.24□□□□□ -0.13
TRAPPC4-212ENST00000533058 KIAA1671Q9BY89 1806 aa14.24□□□□□ -0.13
TRAPPC4-212ENST00000533058 NCOR1O75376 2440 aa14.24□□□□□ -0.13
TRAPPC4-212ENST00000533058 XIRP2A4UGR9 3374 aa14.23□□□□□ -0.13
TRAPPC4-212ENST00000533058 GRXCR2A6NFK2 248 aa14.23□□□□□ -0.13
TRAPPC4-212ENST00000533058 TNFRSF10AO00220 468 aa14.23□□□□□ -0.13
TRAPPC4-212ENST00000533058 N4BP3O15049 544 aa14.23□□□□□ -0.13
TRAPPC4-212ENST00000533058 ZC3H11AO75152 810 aaKnown RBP eCLIP14.23□□□□□ -0.13
TRAPPC4-212ENST00000533058 GADD45BO75293 160 aaPredicted RBP14.23□□□□□ -0.13
TRAPPC4-212ENST00000533058 FAM13AO94988 1023 aa14.23□□□□□ -0.13
TRAPPC4-212ENST00000533058 PRKCBP05771 671 aa14.23□□□□□ -0.13
TRAPPC4-212ENST00000533058 PBX3P40426 434 aa14.23□□□□□ -0.13
TRAPPC4-212ENST00000533058 RNASELQ05823 741 aaKnown RBP14.23□□□□□ -0.13
TRAPPC4-212ENST00000533058 MAPK7Q13164 816 aa14.23□□□□□ -0.13
TRAPPC4-212ENST00000533058 PRPF4BQ13523 1007 aaKnown RBP14.23□□□□□ -0.13
TRAPPC4-212ENST00000533058 LONRF3Q496Y0 759 aa14.23□□□□□ -0.13
TRAPPC4-212ENST00000533058 TMEM184AQ6ZMB5 413 aa14.23□□□□□ -0.13
TRAPPC4-212ENST00000533058 DYMQ7RTS9 669 aa14.23□□□□□ -0.13
TRAPPC4-212ENST00000533058 ADGRD2Q7Z7M1 963 aa14.23□□□□□ -0.13
TRAPPC4-212ENST00000533058 DDX53Q86TM3 631 aaKnown RBP14.23□□□□□ -0.13
TRAPPC4-212ENST00000533058 ZNF280BQ86YH2 543 aa14.23□□□□□ -0.13
TRAPPC4-212ENST00000533058 STAMQ92783 540 aa14.23□□□□□ -0.13
TRAPPC4-212ENST00000533058 KCNN1Q92952 543 aa14.23□□□□□ -0.13
TRAPPC4-212ENST00000533058 IGSF21Q96ID5 467 aa14.23□□□□□ -0.13
TRAPPC4-212ENST00000533058 RNF39Q9H2S5 420 aa14.23□□□□□ -0.13
TRAPPC4-212ENST00000533058 TMEM134Q9H6X4 195 aa14.23□□□□□ -0.13
TRAPPC4-212ENST00000533058 TLE6Q9H808 572 aa14.23□□□□□ -0.13
TRAPPC4-212ENST00000533058 USP25Q9UHP3 1055 aa14.23□□□□□ -0.13
TRAPPC4-212ENST00000533058 FAM50BQ9Y247 325 aa14.23□□□□□ -0.13
TRAPPC4-212ENST00000533058 INPP5FQ9Y2H2 1132 aa14.23□□□□□ -0.13
TRAPPC4-212ENST00000533058 IRAK3Q9Y616 596 aa14.23□□□□□ -0.13
TRAPPC4-212ENST00000533058 ARL5CA6NH57 179 aa14.22□□□□□ -0.13
TRAPPC4-212ENST00000533058 CCDC169A6NNP5 214 aa14.22□□□□□ -0.13
TRAPPC4-212ENST00000533058 SFI1A8K8P3 1242 aa14.22□□□□□ -0.13
TRAPPC4-212ENST00000533058 DDHD2O94830 711 aa14.22□□□□□ -0.13
TRAPPC4-212ENST00000533058 ALDH2P05091 517 aa14.22□□□□□ -0.13
TRAPPC4-212ENST00000533058 IDEP14735 1019 aa14.22□□□□□ -0.13
TRAPPC4-212ENST00000533058 AFMP43652 599 aa14.22□□□□□ -0.13
TRAPPC4-212ENST00000533058 NPTX2P47972 431 aa14.22□□□□□ -0.13
TRAPPC4-212ENST00000533058 NRIP1P48552 1158 aa14.22□□□□□ -0.13
TRAPPC4-212ENST00000533058 AFF1P51825 1210 aaKnown RBP14.22□□□□□ -0.13
TRAPPC4-212ENST00000533058 UBE2HP62256 183 aa14.22□□□□□ -0.13
TRAPPC4-212ENST00000533058 DSC1Q08554 894 aa14.22□□□□□ -0.13
TRAPPC4-212ENST00000533058 DMP1Q13316 513 aaPredicted RBP14.22□□□□□ -0.13
TRAPPC4-212ENST00000533058 KCNC3Q14003 757 aa14.22□□□□□ -0.13
TRAPPC4-212ENST00000533058 GIT2Q14161 759 aa14.22□□□□□ -0.13
TRAPPC4-212ENST00000533058 BMS1Q14692 1282 aaKnown RBP14.22□□□□□ -0.13
TRAPPC4-212ENST00000533058 E2F4Q16254 413 aa14.22□□□□□ -0.13
TRAPPC4-212ENST00000533058 DUSP6Q16828 381 aa14.22□□□□□ -0.13
TRAPPC4-212ENST00000533058 PTCRAQ6ISU1 281 aaPredicted RBP14.22□□□□□ -0.13
TRAPPC4-212ENST00000533058 MRPL43Q8N983 215 aaKnown RBP14.22□□□□□ -0.13
TRAPPC4-212ENST00000533058 TMEM87AQ8NBN3 555 aa14.22□□□□□ -0.13
TRAPPC4-212ENST00000533058 GSTCDQ8NEC7 633 aa14.22□□□□□ -0.13
TRAPPC4-212ENST00000533058 SPIRE2Q8WWL2 714 aa14.22□□□□□ -0.13
TRAPPC4-212ENST00000533058 DDX12PQ92771 950 aa14.22□□□□□ -0.13
TRAPPC4-212ENST00000533058 CCDC34Q96HJ3 373 aa14.22□□□□□ -0.13
TRAPPC4-212ENST00000533058 MSLNLQ96KJ4 702 aa14.22□□□□□ -0.13
TRAPPC4-212ENST00000533058 FAM193BQ96PV7 902 aaPredicted RBP14.22□□□□□ -0.13
TRAPPC4-212ENST00000533058 TCF25Q9BQ70 676 aa14.22□□□□□ -0.13
TRAPPC4-212ENST00000533058 PDZD7Q9H5P4 517 aa14.22□□□□□ -0.13
TRAPPC4-212ENST00000533058 MAGEF1Q9HAY2 307 aa14.22□□□□□ -0.13
TRAPPC4-212ENST00000533058 ARHGAP28Q9P2N2 729 aa14.22□□□□□ -0.13
TRAPPC4-212ENST00000533058 HPSEQ9Y251 543 aa14.22□□□□□ -0.13
TRAPPC4-212ENST00000533058 MYMKA6NI61 221 aa14.21□□□□□ -0.13
TRAPPC4-212ENST00000533058 NT5C1B-RDH14C9J2C7 533 aa14.21□□□□□ -0.13
TRAPPC4-212ENST00000533058 H3BQ06 376 aaPredicted RBP14.21□□□□□ -0.13
TRAPPC4-212ENST00000533058 K7ERI5 159 aa14.21□□□□□ -0.13
TRAPPC4-212ENST00000533058 ZNF202O95125 648 aa14.21□□□□□ -0.13
TRAPPC4-212ENST00000533058 NPTXRO95502 500 aa14.21□□□□□ -0.13
TRAPPC4-212ENST00000533058 SLFN14P0C7P3 912 aa14.21□□□□□ -0.13
TRAPPC4-212ENST00000533058 LIG1P18858 919 aa14.21□□□□□ -0.13
TRAPPC4-212ENST00000533058 GTF2F1P35269 517 aaKnown RBP eCLIP14.21□□□□□ -0.13
TRAPPC4-212ENST00000533058 SLC11A1P49279 550 aa14.21□□□□□ -0.13
TRAPPC4-212ENST00000533058 ASIC1P78348 528 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms