RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 RBM25P49756 843 aaKnown RBP19.72■□□□□ 0.75
PCF11-206ENST00000533018 TTC38Q5R3I4 469 aa19.72■□□□□ 0.75
PCF11-206ENST00000533018 IER5LQ5T953 404 aa19.72■□□□□ 0.75
PCF11-206ENST00000533018 ASIC4Q96FT7 647 aa19.72■□□□□ 0.75
PCF11-206ENST00000533018 RPS6KC1Q96S38 1066 aa19.72■□□□□ 0.75
PCF11-206ENST00000533018 HERC2P3Q9BVR0 1158 aa19.72■□□□□ 0.75
PCF11-206ENST00000533018 PRMT7Q9NVM4 692 aaPredicted RBP19.72■□□□□ 0.75
PCF11-206ENST00000533018 LIMD1Q9UGP4 676 aa19.72■□□□□ 0.75
PCF11-206ENST00000533018 SORCS3Q9UPU3 1222 aa19.72■□□□□ 0.75
PCF11-206ENST00000533018 F8W810 466 aa19.71■□□□□ 0.75
PCF11-206ENST00000533018 INPPL1O15357 1258 aa19.71■□□□□ 0.75
PCF11-206ENST00000533018 LILRB3O75022 631 aa19.71■□□□□ 0.75
PCF11-206ENST00000533018 MYBP10242 640 aa19.71■□□□□ 0.75
PCF11-206ENST00000533018 RPA1P27694 616 aa19.71■□□□□ 0.75
PCF11-206ENST00000533018 HMGN5P82970 282 aaKnown RBP19.71■□□□□ 0.75
PCF11-206ENST00000533018 DSC1Q08554 894 aa19.71■□□□□ 0.75
PCF11-206ENST00000533018 PADI6Q6TGC4 694 aa19.71■□□□□ 0.75
PCF11-206ENST00000533018 PLCD3Q8N3E9 789 aa19.71■□□□□ 0.75
PCF11-206ENST00000533018 FBXO18Q8NFZ0 1043 aa19.71■□□□□ 0.75
PCF11-206ENST00000533018 NOL7Q9UMY1 257 aaKnown RBP19.71■□□□□ 0.75
PCF11-206ENST00000533018 C2orf16Q68DN1 1984 aa19.7■□□□□ 0.74
PCF11-206ENST00000533018 ASGR2P07307 311 aa19.7■□□□□ 0.74
PCF11-206ENST00000533018 ORC2Q13416 577 aaPredicted RBP19.7■□□□□ 0.74
PCF11-206ENST00000533018 HAUS3Q68CZ6 603 aa19.7■□□□□ 0.74
PCF11-206ENST00000533018 ELMSAN1Q6PJG2 1045 aa19.7■□□□□ 0.74
PCF11-206ENST00000533018 CCDC149Q6ZUS6 474 aa19.7■□□□□ 0.74
PCF11-206ENST00000533018 GPR149Q86SP6 731 aa19.7■□□□□ 0.74
PCF11-206ENST00000533018 NOSTRINQ8IVI9 506 aa19.7■□□□□ 0.74
PCF11-206ENST00000533018 UBALD2Q8IYN6 164 aa19.7■□□□□ 0.74
PCF11-206ENST00000533018 DEPTORQ8TB45 409 aa19.7■□□□□ 0.74
PCF11-206ENST00000533018 FEZF2Q8TBJ5 459 aa19.7■□□□□ 0.74
PCF11-206ENST00000533018 RABGGTAQ92696 567 aa19.7■□□□□ 0.74
PCF11-206ENST00000533018 ACSF2Q96CM8 615 aaPredicted RBP19.7■□□□□ 0.74
PCF11-206ENST00000533018 PRIMPOLQ96LW4 560 aa19.7■□□□□ 0.74
PCF11-206ENST00000533018 C2orf40Q9H1Z8 148 aa19.7■□□□□ 0.74
PCF11-206ENST00000533018 MAN1C1Q9NR34 630 aa19.7■□□□□ 0.74
PCF11-206ENST00000533018 DPP7Q9UHL4 492 aa19.7■□□□□ 0.74
PCF11-206ENST00000533018 PLXNA3P51805 1871 aa19.69■□□□□ 0.74
PCF11-206ENST00000533018 TEX28O15482 410 aa19.69■□□□□ 0.74
PCF11-206ENST00000533018 TADA2AO75478 443 aa19.69■□□□□ 0.74
PCF11-206ENST00000533018 BRD1O95696 1058 aa19.69■□□□□ 0.74
PCF11-206ENST00000533018 CYP11B2P19099 503 aa19.69■□□□□ 0.74
PCF11-206ENST00000533018 CCT6AP40227 531 aaKnown RBP19.69■□□□□ 0.74
PCF11-206ENST00000533018 GRIK3Q13003 919 aa19.69■□□□□ 0.74
PCF11-206ENST00000533018 PRPF4BQ13523 1007 aaKnown RBP19.69■□□□□ 0.74
PCF11-206ENST00000533018 MAPK6Q16659 721 aa19.69■□□□□ 0.74
PCF11-206ENST00000533018 PPP4R3CPQ6ZMV5 832 aa19.69■□□□□ 0.74
PCF11-206ENST00000533018 ZDHHC14Q8IZN3 488 aa19.69■□□□□ 0.74
PCF11-206ENST00000533018 B3GALT6Q96L58 329 aa19.69■□□□□ 0.74
PCF11-206ENST00000533018 PRRX2Q99811 253 aa19.69■□□□□ 0.74
PCF11-206ENST00000533018 SH2B1Q9NRF2 756 aaPredicted RBP19.69■□□□□ 0.74
PCF11-206ENST00000533018 USTQ9Y2C2 406 aa19.69■□□□□ 0.74
PCF11-206ENST00000533018 CCDC195A0A1B0GUA6 201 aa19.68■□□□□ 0.74
PCF11-206ENST00000533018 N4BP3O15049 544 aa19.68■□□□□ 0.74
PCF11-206ENST00000533018 GLUD1P00367 558 aa19.68■□□□□ 0.74
PCF11-206ENST00000533018 PRKCBP05771 671 aa19.68■□□□□ 0.74
PCF11-206ENST00000533018 SPATA31D3P0C874 917 aa19.68■□□□□ 0.74
PCF11-206ENST00000533018 MRE11P49959 708 aa19.68■□□□□ 0.74
PCF11-206ENST00000533018 VCPP55072 806 aaKnown RBP19.68■□□□□ 0.74
PCF11-206ENST00000533018 NBR1Q14596 966 aa19.68■□□□□ 0.74
PCF11-206ENST00000533018 KIAA0319Q5VV43 1072 aa19.68■□□□□ 0.74
PCF11-206ENST00000533018 CDCA2Q69YH5 1023 aaPredicted RBP19.68■□□□□ 0.74
PCF11-206ENST00000533018 FUT10Q6P4F1 479 aa19.68■□□□□ 0.74
PCF11-206ENST00000533018 SPATA31D4Q6ZUB0 917 aa19.68■□□□□ 0.74
PCF11-206ENST00000533018 OTOP3Q7RTS5 596 aa19.68■□□□□ 0.74
PCF11-206ENST00000533018 PALB2Q86YC2 1186 aa19.68■□□□□ 0.74
PCF11-206ENST00000533018 GLYCTKQ8IVS8 523 aa19.68■□□□□ 0.74
PCF11-206ENST00000533018 GSTCDQ8NEC7 633 aa19.68■□□□□ 0.74
PCF11-206ENST00000533018 PRSS33Q8NF86 280 aa19.68■□□□□ 0.74
PCF11-206ENST00000533018 IFT74Q96LB3 600 aa19.68■□□□□ 0.74
PCF11-206ENST00000533018 ADPGKQ9BRR6 497 aa19.68■□□□□ 0.74
PCF11-206ENST00000533018 SMOC2Q9H3U7 446 aa19.68■□□□□ 0.74
PCF11-206ENST00000533018 FZD8Q9H461 694 aa19.68■□□□□ 0.74
PCF11-206ENST00000533018 POLD4Q9HCU8 107 aa19.68■□□□□ 0.74
PCF11-206ENST00000533018 LRWD1Q9UFC0 647 aa19.68■□□□□ 0.74
PCF11-206ENST00000533018 ADAM28Q9UKQ2 775 aa19.68■□□□□ 0.74
PCF11-206ENST00000533018 KMT2EQ8IZD2 1858 aa19.68■□□□□ 0.74
PCF11-206ENST00000533018 TTLL13PA6NNM8 815 aa19.67■□□□□ 0.74
PCF11-206ENST00000533018 PDGFBP01127 241 aaPredicted RBP19.67■□□□□ 0.74
PCF11-206ENST00000533018 AVPR2P30518 371 aa19.67■□□□□ 0.74
PCF11-206ENST00000533018 NAMPTP43490 491 aa19.67■□□□□ 0.74
PCF11-206ENST00000533018 TRAPPC10P48553 1259 aa19.67■□□□□ 0.74
PCF11-206ENST00000533018 PTPN5P54829 565 aa19.67■□□□□ 0.74
PCF11-206ENST00000533018 DSG1Q02413 1049 aa19.67■□□□□ 0.74
PCF11-206ENST00000533018 PPP2R5AQ15172 486 aa19.67■□□□□ 0.74
PCF11-206ENST00000533018 USP41Q3LFD5 358 aa19.67■□□□□ 0.74
PCF11-206ENST00000533018 C15orf39Q6ZRI6 1047 aa19.67■□□□□ 0.74
PCF11-206ENST00000533018 RIN2Q8WYP3 895 aaPredicted RBP19.67■□□□□ 0.74
PCF11-206ENST00000533018 BSNDQ8WZ55 320 aa19.67■□□□□ 0.74
PCF11-206ENST00000533018 GPR62Q9BZJ7 368 aa19.67■□□□□ 0.74
PCF11-206ENST00000533018 BHMT2Q9H2M3 363 aa19.67■□□□□ 0.74
PCF11-206ENST00000533018 PDZD7Q9H5P4 517 aa19.67■□□□□ 0.74
PCF11-206ENST00000533018 SNTG2Q9NY99 539 aa19.67■□□□□ 0.74
PCF11-206ENST00000533018 CACNG4Q9UBN1 327 aa19.67■□□□□ 0.74
PCF11-206ENST00000533018 KIAA1024Q9UPX6 916 aa19.67■□□□□ 0.74
PCF11-206ENST00000533018 USP20Q9Y2K6 914 aa19.67■□□□□ 0.74
PCF11-206ENST00000533018 DENND4AQ7Z401 1863 aa19.67■□□□□ 0.74
PCF11-206ENST00000533018 MTCL1Q9Y4B5 1905 aaKnown RBP19.66■□□□□ 0.74
PCF11-206ENST00000533018 CENPBP07199 599 aaPredicted RBP19.66■□□□□ 0.74
PCF11-206ENST00000533018 FXR2P51116 673 aaKnown RBP eCLIP19.66■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms