RNA–Protein interactions for RNA: ENST00000532259.1

SRPRA-206, Transcript of SRP receptor subunit alpha, humanhuman

TSL 2 BASIC

Gene SRPRA, Length 2,453 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPRA-206ENST00000532259 KRT39Q6A163 491 aa16.44■□□□□ 0.22
SRPRA-206ENST00000532259 ARMCX2Q7L311 632 aa16.44■□□□□ 0.22
SRPRA-206ENST00000532259 GPRC5AQ8NFJ5 357 aa16.44■□□□□ 0.22
SRPRA-206ENST00000532259 AFAP1L1Q8TED9 768 aa16.44■□□□□ 0.22
SRPRA-206ENST00000532259 TATDN2Q93075 761 aa16.44■□□□□ 0.22
SRPRA-206ENST00000532259 RRAGCQ9HB90 399 aa16.44■□□□□ 0.22
SRPRA-206ENST00000532259 ABCB6Q9NP58 842 aa16.44■□□□□ 0.22
SRPRA-206ENST00000532259 NRBP2Q9NSY0 501 aa16.44■□□□□ 0.22
SRPRA-206ENST00000532259 OGFRQ9NZT2 677 aa16.44■□□□□ 0.22
SRPRA-206ENST00000532259 CYP26A1O43174 497 aa16.43■□□□□ 0.22
SRPRA-206ENST00000532259 N4BP1O75113 896 aaKnown RBP16.43■□□□□ 0.22
SRPRA-206ENST00000532259 SGPL1O95470 568 aa16.43■□□□□ 0.22
SRPRA-206ENST00000532259 SNRPFP62306 86 aaKnown RBP16.43■□□□□ 0.22
SRPRA-206ENST00000532259 FAM160B1Q5W0V3 765 aa16.43■□□□□ 0.22
SRPRA-206ENST00000532259 CRELD2Q6UXH1 353 aaPredicted RBP16.43■□□□□ 0.22
SRPRA-206ENST00000532259 PPP1R16BQ96T49 567 aa16.43■□□□□ 0.22
SRPRA-206ENST00000532259 PTPN18Q99952 460 aa16.43■□□□□ 0.22
SRPRA-206ENST00000532259 PDE11AQ9HCR9 933 aa16.43■□□□□ 0.22
SRPRA-206ENST00000532259 MAPK13O15264 365 aa16.43■□□□□ 0.22
SRPRA-206ENST00000532259 TBC1D8O95759 1140 aa16.43■□□□□ 0.22
SRPRA-206ENST00000532259 TNNI1P19237 187 aa16.43■□□□□ 0.22
SRPRA-206ENST00000532259 SLC7A5Q01650 507 aa16.43■□□□□ 0.22
SRPRA-206ENST00000532259 LONRF2Q1L5Z9 754 aa16.43■□□□□ 0.22
SRPRA-206ENST00000532259 ZBTB33Q86T24 672 aa16.43■□□□□ 0.22
SRPRA-206ENST00000532259 SLC47A2Q86VL8 602 aa16.43■□□□□ 0.22
SRPRA-206ENST00000532259 MSANTD4Q8NCY6 345 aa16.43■□□□□ 0.22
SRPRA-206ENST00000532259 HDAC7Q8WUI4 952 aa16.43■□□□□ 0.22
SRPRA-206ENST00000532259 PCDHGC5Q9Y5F6 944 aa16.43■□□□□ 0.22
SRPRA-206ENST00000532259 ZNF233A6NK53 670 aa16.42■□□□□ 0.22
SRPRA-206ENST00000532259 MAFO75444 373 aaPredicted RBP16.42■□□□□ 0.22
SRPRA-206ENST00000532259 TCP1P17987 556 aaKnown RBP16.42■□□□□ 0.22
SRPRA-206ENST00000532259 NAMPTP43490 491 aa16.42■□□□□ 0.22
SRPRA-206ENST00000532259 IGBP1P78318 339 aa16.42■□□□□ 0.22
SRPRA-206ENST00000532259 PLCB4Q15147 1175 aa16.42■□□□□ 0.22
SRPRA-206ENST00000532259 RPUSD2Q8IZ73 545 aaKnown RBP16.42■□□□□ 0.22
SRPRA-206ENST00000532259 SPATA4Q8NEY3 305 aa16.42■□□□□ 0.22
SRPRA-206ENST00000532259 ARHGEF26Q96DR7 871 aa16.42■□□□□ 0.22
SRPRA-206ENST00000532259 THAP2Q9H0W7 228 aa16.42■□□□□ 0.22
SRPRA-206ENST00000532259 RNPEPQ9H4A4 650 aa16.42■□□□□ 0.22
SRPRA-206ENST00000532259 AGO2Q9UKV8 859 aaKnown RBP16.42■□□□□ 0.22
SRPRA-206ENST00000532259 TRPC6Q9Y210 931 aa16.42■□□□□ 0.22
SRPRA-206ENST00000532259 GRIN3BO60391 1043 aa16.42■□□□□ 0.22
SRPRA-206ENST00000532259 CELF2O95319 508 aaKnown RBP16.42■□□□□ 0.22
SRPRA-206ENST00000532259 MEI1Q5TIA1 1274 aa16.42■□□□□ 0.22
SRPRA-206ENST00000532259 SPOPLQ6IQ16 392 aa16.42■□□□□ 0.22
SRPRA-206ENST00000532259 CDR2LQ86X02 465 aaPredicted RBP16.42■□□□□ 0.22
SRPRA-206ENST00000532259 HELQQ8TDG4 1101 aa16.42■□□□□ 0.22
SRPRA-206ENST00000532259 AGPAT1Q99943 283 aa16.42■□□□□ 0.22
SRPRA-206ENST00000532259 TMEM8AQ9HCN3 771 aa16.42■□□□□ 0.22
SRPRA-206ENST00000532259 RAB20Q9NX57 234 aa16.42■□□□□ 0.22
SRPRA-206ENST00000532259 KCNK3O14649 394 aa16.41■□□□□ 0.22
SRPRA-206ENST00000532259 GARTP22102 1010 aa16.41■□□□□ 0.22
SRPRA-206ENST00000532259 PRPF4BQ13523 1007 aaKnown RBP16.41■□□□□ 0.22
SRPRA-206ENST00000532259 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.41■□□□□ 0.22
SRPRA-206ENST00000532259 DAAM2Q86T65 1068 aa16.41■□□□□ 0.22
SRPRA-206ENST00000532259 FBXL13Q8NEE6 735 aa16.41■□□□□ 0.22
SRPRA-206ENST00000532259 LRRC1Q9BTT6 524 aa16.41■□□□□ 0.22
SRPRA-206ENST00000532259 MSTO1Q9BUK6 570 aa16.41■□□□□ 0.22
SRPRA-206ENST00000532259 GBA2Q9HCG7 927 aaPredicted RBP16.41■□□□□ 0.22
SRPRA-206ENST00000532259 RBM12Q9NTZ6 932 aaKnown RBP16.41■□□□□ 0.22
SRPRA-206ENST00000532259 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.41■□□□□ 0.22
SRPRA-206ENST00000532259 CCDC151A5D8V7 595 aa16.41■□□□□ 0.22
SRPRA-206ENST00000532259 P4HA2O15460 535 aa16.41■□□□□ 0.22
SRPRA-206ENST00000532259 ATMINO43313 823 aaPredicted RBP16.41■□□□□ 0.22
SRPRA-206ENST00000532259 CSDE1O75534 798 aaKnown RBP16.41■□□□□ 0.22
SRPRA-206ENST00000532259 CETPP11597 493 aa16.41■□□□□ 0.22
SRPRA-206ENST00000532259 BIRC3Q13489 604 aa16.41■□□□□ 0.22
SRPRA-206ENST00000532259 KIF22Q14807 665 aa16.41■□□□□ 0.22
SRPRA-206ENST00000532259 C10orf76Q5T2E6 689 aa16.41■□□□□ 0.22
SRPRA-206ENST00000532259 NOP9Q86U38 636 aaKnown RBP16.41■□□□□ 0.22
SRPRA-206ENST00000532259 METTL13Q8N6R0 699 aa16.41■□□□□ 0.22
SRPRA-206ENST00000532259 RNF149Q8NC42 400 aa16.41■□□□□ 0.22
SRPRA-206ENST00000532259 TPCN2Q8NHX9 752 aa16.41■□□□□ 0.22
SRPRA-206ENST00000532259 SLC35G2Q8TBE7 412 aa16.41■□□□□ 0.22
SRPRA-206ENST00000532259 PSPC1Q8WXF1 523 aaKnown RBP16.41■□□□□ 0.22
SRPRA-206ENST00000532259 FAM212AQ96EL1 285 aa16.41■□□□□ 0.22
SRPRA-206ENST00000532259 FNBP1Q96RU3 617 aa16.41■□□□□ 0.22
SRPRA-206ENST00000532259 TCHPQ9BT92 498 aa16.41■□□□□ 0.22
SRPRA-206ENST00000532259 PNMA3Q9UL41 463 aa16.41■□□□□ 0.22
SRPRA-206ENST00000532259 EXTL3O43909 919 aa16.4■□□□□ 0.22
SRPRA-206ENST00000532259 KRT5P13647 590 aa16.4■□□□□ 0.22
SRPRA-206ENST00000532259 RFC5P40937 340 aa16.4■□□□□ 0.22
SRPRA-206ENST00000532259 TNFSF9P41273 254 aa16.4■□□□□ 0.22
SRPRA-206ENST00000532259 ADCYAP1R1P41586 468 aa16.4■□□□□ 0.22
SRPRA-206ENST00000532259 PAFAH1B1P43034 410 aa16.4■□□□□ 0.22
SRPRA-206ENST00000532259 CLCN3P51790 818 aa16.4■□□□□ 0.22
SRPRA-206ENST00000532259 ZNF792Q3KQV3 632 aa16.4■□□□□ 0.22
SRPRA-206ENST00000532259 TAPT1Q6NXT6 567 aa16.4■□□□□ 0.22
SRPRA-206ENST00000532259 RHPN2Q8IUC4 686 aa16.4■□□□□ 0.22
SRPRA-206ENST00000532259 KRT222Q8N1A0 295 aa16.4■□□□□ 0.22
SRPRA-206ENST00000532259 PPP1R13LQ8WUF5 828 aa16.4■□□□□ 0.22
SRPRA-206ENST00000532259 NLRP4Q96MN2 994 aa16.4■□□□□ 0.22
SRPRA-206ENST00000532259 PCDHB18PQ96TA0 734 aa16.4■□□□□ 0.22
SRPRA-206ENST00000532259 MPHOSPH6Q99547 160 aaKnown RBP16.4■□□□□ 0.22
SRPRA-206ENST00000532259 RAB21Q9UL25 225 aa16.4■□□□□ 0.22
SRPRA-206ENST00000532259 ADCY3O60266 1144 aa16.4■□□□□ 0.22
SRPRA-206ENST00000532259 LGR5O75473 907 aa16.4■□□□□ 0.22
SRPRA-206ENST00000532259 CCDC172P0C7W6 258 aa16.4■□□□□ 0.22
SRPRA-206ENST00000532259 PLA2G4AP47712 749 aa16.4■□□□□ 0.22
SRPRA-206ENST00000532259 LAMTOR4Q0VGL1 99 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms