RNA–Protein interactions for RNA: ENST00000532126.1

HMGB1P42-201, Transcript of high mobility group box 1 pseudogene 42, humanhuman

BASIC

Gene HMGB1P42, Length 553 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P42-201ENST00000532126 VWCEQ96DN2 955 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 INTS4Q96HW7 963 aaKnown RBP6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 EAF1Q96JC9 268 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 MTMR9Q96QG7 549 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 ZNF700Q9H0M5 742 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 RBSNQ9H1K0 784 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 TTC12Q9H892 705 aaPredicted RBP6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 SLC4A7Q9Y6M7 1214 aa6.45□□□□□ -1.38
HMGB1P42-201ENST00000532126 CEP290O15078 2479 aa6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 ABHD14A-ACY1A0A1B0GW23 586 aa6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 CDK2AP1O14519 115 aa6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 MAGEB2O15479 319 aa6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 BAIAP3O94812 1187 aa6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 C22orf31O95567 290 aa6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 CHRNA1P02708 482 aa6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 OR52Z1P0C646 297 aa6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 ATP2A2P16615 1042 aaKnown RBP6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 TMOD1P28289 359 aa6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 SOX5P35711 763 aa6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 KCNJ6P48051 423 aa6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 MRPS6P82932 125 aaKnown RBP6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 CYP4A11Q02928 519 aa6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 SPIRE1Q08AE8 756 aa6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 TBC1D8BQ0IIM8 1120 aa6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 TMEM62Q0P6H9 643 aa6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 IKBKEQ14164 716 aa6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 CCDC85BQ15834 202 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 RILPL1Q5EBL4 403 aa6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 FAM109BQ6ICB4 259 aaPredicted RBP6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 HSCBQ8IWL3 235 aa6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 TPH2Q8IWU9 490 aa6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 METTL13Q8N6R0 699 aa6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 GPATCH11Q8N954 259 aa6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 PPM1EQ8WY54 764 aa6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 SEPT8Q92599 483 aa6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 SNX21Q969T3 373 aa6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 CDK15Q96Q40 435 aa6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 LXNQ9BS40 222 aa6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 NIFKQ9BYG3 293 aaKnown RBP6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 BCO2Q9BYV7 579 aa6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 TMEM60Q9H2L4 133 aa6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 ARNT2Q9HBZ2 717 aa6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 ACTR10Q9NZ32 417 aa6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 RGL1Q9NZL6 768 aa6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 CDY2AQ9Y6F7 541 aa6.44□□□□□ -1.38
HMGB1P42-201ENST00000532126 MYH7BA7E2Y1 1941 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 VPS37CA5D8V6 355 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 TMEM150BA6NC51 233 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 GRXCR1A8MXD5 290 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 LAD1O00515 517 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 EFCAB14O75071 495 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 GADD45BO75293 160 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 SLITRK3O94933 977 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 STBD1O95210 358 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 GHRP10912 638 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 YWHABP31946 246 aaKnown RBP6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 TECP42680 631 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 CDKN1CP49918 316 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 TOB1P50616 345 aaPredicted RBP6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 CLCN3P51790 818 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 POU5F1BQ06416 359 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 MGAT3Q09327 533 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 CTTNQ14247 550 aaKnown RBP6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 LPIN1Q14693 890 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 TARBP2Q15633 366 aaKnown RBP6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 FXNQ16595 210 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 TMEM266Q2M3C6 531 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 PLA2G4FQ68DD2 849 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 EFCAB12Q6NXP0 572 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 NXPE4Q6UWF7 544 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 ANO5Q75V66 913 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 OTUD6AQ7L8S5 288 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 TREML1Q86YW5 311 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 C4orf19Q8IY42 314 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 ALDH16A1Q8IZ83 802 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 KIAA0319LQ8IZA0 1049 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 USP38Q8NB14 1042 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 DBF4BQ8NFT6 615 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 OR6P1Q8NGX9 317 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 ERMNQ8TAM6 284 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 PHOSPHO2Q8TCD6 241 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 NEK9Q8TD19 979 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 APBB2Q92870 758 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 MFSD3Q96ES6 412 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 DYDC2Q96IM9 177 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 CEP170P1Q96L14 293 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 MAP7D2Q96T17 732 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 SLC9A7Q96T83 725 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 HSD17B14Q9BPX1 270 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 EIF2AK1Q9BQI3 630 aaKnown RBP6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 SH2D3AQ9BRG2 576 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 IFIH1Q9BYX4 1025 aaKnown RBP6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 CELF4Q9BZC1 486 aaKnown RBP6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 CAAP1Q9H8G2 361 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 SUGCTQ9HAC7 445 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 SFMBT1Q9UHJ3 866 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 MSRAQ9UJ68 235 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 MAPK8IP1Q9UQF2 711 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 GINS2Q9Y248 185 aa6.43□□□□□ -1.38
HMGB1P42-201ENST00000532126 FNDC3AQ9Y2H6 1198 aaKnown RBP6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms