RNA–Protein interactions for RNA: ENST00000531900.1

GPATCH4-216, Transcript of G-patch domain containing 4, humanhuman

TSL 2

Gene GPATCH4, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-216ENST00000531900 SV2BQ7L1I2 683 aa11.89□□□□□ -0.51
GPATCH4-216ENST00000531900 SLC39A11Q8N1S5 342 aa11.89□□□□□ -0.51
GPATCH4-216ENST00000531900 RNF169Q8NCN4 708 aa11.89□□□□□ -0.51
GPATCH4-216ENST00000531900 RASSF8Q8NHQ8 419 aa11.89□□□□□ -0.51
GPATCH4-216ENST00000531900 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.89□□□□□ -0.51
GPATCH4-216ENST00000531900 DNAJC19Q96DA6 116 aa11.89□□□□□ -0.51
GPATCH4-216ENST00000531900 ZNF558Q96NG5 402 aa11.89□□□□□ -0.51
GPATCH4-216ENST00000531900 TMEM175Q9BSA9 504 aa11.89□□□□□ -0.51
GPATCH4-216ENST00000531900 MRPL4Q9BYD3 311 aaKnown RBP11.89□□□□□ -0.51
GPATCH4-216ENST00000531900 TRIM6Q9C030 488 aaPredicted RBP11.89□□□□□ -0.51
GPATCH4-216ENST00000531900 KBTBD4Q9NVX7 518 aa11.89□□□□□ -0.51
GPATCH4-216ENST00000531900 HCSTQ9UBK5 93 aa11.89□□□□□ -0.51
GPATCH4-216ENST00000531900 PCDHA7Q9UN72 937 aa11.89□□□□□ -0.51
GPATCH4-216ENST00000531900 CITO14578 2027 aa11.89□□□□□ -0.51
GPATCH4-216ENST00000531900 NPHP3-ACAD11A0A0J9YXS1 232 aa11.88□□□□□ -0.51
GPATCH4-216ENST00000531900 SLC16A4O15374 487 aa11.88□□□□□ -0.51
GPATCH4-216ENST00000531900 FGF18O76093 207 aa11.88□□□□□ -0.51
GPATCH4-216ENST00000531900 EFEMP2O95967 443 aa11.88□□□□□ -0.51
GPATCH4-216ENST00000531900 PIGRP01833 764 aa11.88□□□□□ -0.51
GPATCH4-216ENST00000531900 GALTP07902 379 aa11.88□□□□□ -0.51
GPATCH4-216ENST00000531900 DNAJB1P25685 340 aa11.88□□□□□ -0.51
GPATCH4-216ENST00000531900 ALDH7A1P49419 539 aaKnown RBP11.88□□□□□ -0.51
GPATCH4-216ENST00000531900 AFF1P51825 1210 aaKnown RBP11.88□□□□□ -0.51
GPATCH4-216ENST00000531900 BCAR1P56945 870 aa11.88□□□□□ -0.51
GPATCH4-216ENST00000531900 GTF2BQ00403 316 aa11.88□□□□□ -0.51
GPATCH4-216ENST00000531900 RAD51AP2Q09MP3 1159 aa11.88□□□□□ -0.51
GPATCH4-216ENST00000531900 ATF7IP2Q5U623 682 aa11.88□□□□□ -0.51
GPATCH4-216ENST00000531900 FOXD4L5Q5VV16 416 aaPredicted RBP11.88□□□□□ -0.51
GPATCH4-216ENST00000531900 RESP18Q5W5W9 173 aa11.88□□□□□ -0.51
GPATCH4-216ENST00000531900 EEF1DP3Q658K8 133 aa11.88□□□□□ -0.51
GPATCH4-216ENST00000531900 ADALQ6DHV7 355 aa11.88□□□□□ -0.51
GPATCH4-216ENST00000531900 HAUS6Q7Z4H7 955 aa11.88□□□□□ -0.51
GPATCH4-216ENST00000531900 APBB1IPQ7Z5R6 666 aaPredicted RBP11.88□□□□□ -0.51
GPATCH4-216ENST00000531900 URGCPQ8TCY9 931 aa11.88□□□□□ -0.51
GPATCH4-216ENST00000531900 FOXD4L4Q8WXT5 416 aaPredicted RBP11.88□□□□□ -0.51
GPATCH4-216ENST00000531900 MRPS27Q92552 414 aaKnown RBP11.88□□□□□ -0.51
GPATCH4-216ENST00000531900 ADPGKQ9BRR6 497 aa11.88□□□□□ -0.51
GPATCH4-216ENST00000531900 STRA6Q9BX79 667 aa11.88□□□□□ -0.51
GPATCH4-216ENST00000531900 TNMDQ9H2S6 317 aa11.88□□□□□ -0.51
GPATCH4-216ENST00000531900 NXF3Q9H4D5 531 aaKnown RBP11.88□□□□□ -0.51
GPATCH4-216ENST00000531900 NRDE2Q9H7Z3 1164 aa11.88□□□□□ -0.51
GPATCH4-216ENST00000531900 ALG13Q9NP73 1137 aaKnown RBP11.88□□□□□ -0.51
GPATCH4-216ENST00000531900 CLDND1Q9NY35 253 aa11.88□□□□□ -0.51
GPATCH4-216ENST00000531900 SPG21Q9NZD8 308 aa11.88□□□□□ -0.51
GPATCH4-216ENST00000531900 SEL1LQ9UBV2 794 aa11.88□□□□□ -0.51
GPATCH4-216ENST00000531900 STK39Q9UEW8 545 aa11.88□□□□□ -0.51
GPATCH4-216ENST00000531900 FAM237AA0A1B0GTK4 181 aa11.87□□□□□ -0.51
GPATCH4-216ENST00000531900 GRXCR2A6NFK2 248 aa11.87□□□□□ -0.51
GPATCH4-216ENST00000531900 MYMKA6NI61 221 aa11.87□□□□□ -0.51
GPATCH4-216ENST00000531900 H3BQ06 376 aaPredicted RBP11.87□□□□□ -0.51
GPATCH4-216ENST00000531900 FSCN2O14926 492 aa11.87□□□□□ -0.51
GPATCH4-216ENST00000531900 TRAK2O60296 914 aa11.87□□□□□ -0.51
GPATCH4-216ENST00000531900 TOM1L1O75674 476 aa11.87□□□□□ -0.51
GPATCH4-216ENST00000531900 DDHD2O94830 711 aa11.87□□□□□ -0.51
GPATCH4-216ENST00000531900 NPTXRO95502 500 aa11.87□□□□□ -0.51
GPATCH4-216ENST00000531900 MCF2P10911 925 aa11.87□□□□□ -0.51
GPATCH4-216ENST00000531900 GAP43P17677 238 aa11.87□□□□□ -0.51
GPATCH4-216ENST00000531900 STAT6P42226 847 aa11.87□□□□□ -0.51
GPATCH4-216ENST00000531900 KRT85P78386 507 aa11.87□□□□□ -0.51
GPATCH4-216ENST00000531900 NUCB2P80303 420 aa11.87□□□□□ -0.51
GPATCH4-216ENST00000531900 CTC1Q2NKJ3 1217 aa11.87□□□□□ -0.51
GPATCH4-216ENST00000531900 XKR4Q5GH76 650 aa11.87□□□□□ -0.51
GPATCH4-216ENST00000531900 CDR2LQ86X02 465 aaPredicted RBP11.87□□□□□ -0.51
GPATCH4-216ENST00000531900 ZNF280BQ86YH2 543 aa11.87□□□□□ -0.51
GPATCH4-216ENST00000531900 COLGALT2Q8IYK4 626 aa11.87□□□□□ -0.51
GPATCH4-216ENST00000531900 MYCT1Q8N699 235 aa11.87□□□□□ -0.51
GPATCH4-216ENST00000531900 IQUBQ8NA54 791 aa11.87□□□□□ -0.51
GPATCH4-216ENST00000531900 LEO1Q8WVC0 666 aaPredicted RBP11.87□□□□□ -0.51
GPATCH4-216ENST00000531900 POF1BQ8WVV4 589 aa11.87□□□□□ -0.51
GPATCH4-216ENST00000531900 DDX12PQ92771 950 aa11.87□□□□□ -0.51
GPATCH4-216ENST00000531900 GAD1Q99259 594 aa11.87□□□□□ -0.51
GPATCH4-216ENST00000531900 PYM1Q9BRP8 204 aaKnown RBP11.87□□□□□ -0.51
GPATCH4-216ENST00000531900 LRRC27Q9C0I9 530 aa11.87□□□□□ -0.51
GPATCH4-216ENST00000531900 SCAND2PQ9GZW5 306 aaPredicted RBP11.87□□□□□ -0.51
GPATCH4-216ENST00000531900 MAGEF1Q9HAY2 307 aa11.87□□□□□ -0.51
GPATCH4-216ENST00000531900 OLFML3Q9NRN5 406 aa11.87□□□□□ -0.51
GPATCH4-216ENST00000531900 MIOSQ9NXC5 875 aa11.87□□□□□ -0.51
GPATCH4-216ENST00000531900 PUF60Q9UHX1 559 aaKnown RBP11.87□□□□□ -0.51
GPATCH4-216ENST00000531900 HES2Q9Y543 173 aa11.87□□□□□ -0.51
GPATCH4-216ENST00000531900 IRAK3Q9Y616 596 aa11.87□□□□□ -0.51
GPATCH4-216ENST00000531900 B4GALT3O60512 393 aa11.86□□□□□ -0.51
GPATCH4-216ENST00000531900 TBCAO75347 108 aaKnown RBP11.86□□□□□ -0.51
GPATCH4-216ENST00000531900 PPP1R37O75864 691 aa11.86□□□□□ -0.51
GPATCH4-216ENST00000531900 FAM13AO94988 1023 aa11.86□□□□□ -0.51
GPATCH4-216ENST00000531900 ALDH2P05091 517 aa11.86□□□□□ -0.51
GPATCH4-216ENST00000531900 KRT18P05783 430 aaKnown RBP11.86□□□□□ -0.51
GPATCH4-216ENST00000531900 COL9A1P20849 921 aa11.86□□□□□ -0.51
GPATCH4-216ENST00000531900 CMA1P23946 247 aa11.86□□□□□ -0.51
GPATCH4-216ENST00000531900 SSTR3P32745 418 aaPredicted RBP11.86□□□□□ -0.51
GPATCH4-216ENST00000531900 GRM5P41594 1212 aa11.86□□□□□ -0.51
GPATCH4-216ENST00000531900 ME1P48163 572 aa11.86□□□□□ -0.51
GPATCH4-216ENST00000531900 CACNB1Q02641 598 aaPredicted RBP11.86□□□□□ -0.51
GPATCH4-216ENST00000531900 KRT17Q04695 432 aa11.86□□□□□ -0.51
GPATCH4-216ENST00000531900 GRIK3Q13003 919 aa11.86□□□□□ -0.51
GPATCH4-216ENST00000531900 STRN3Q13033 797 aa11.86□□□□□ -0.51
GPATCH4-216ENST00000531900 DHX8Q14562 1220 aaKnown RBP11.86□□□□□ -0.51
GPATCH4-216ENST00000531900 LONRF3Q496Y0 759 aa11.86□□□□□ -0.51
GPATCH4-216ENST00000531900 ALKAL1Q6UXT8 129 aa11.86□□□□□ -0.51
GPATCH4-216ENST00000531900 ZNF720Q7Z2F6 126 aa11.86□□□□□ -0.51
GPATCH4-216ENST00000531900 DDX53Q86TM3 631 aaKnown RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms