RNA–Protein interactions for RNA: ENST00000531551.5

CTSB-222, Transcript of cathepsin B, humanhuman

TSL 1 (best)

Gene CTSB, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-222ENST00000531551 GARTP22102 1010 aa19.27■□□□□ 0.68
CTSB-222ENST00000531551 PROZP22891 400 aa19.27■□□□□ 0.68
CTSB-222ENST00000531551 RPL13P26373 211 aaKnown RBP19.27■□□□□ 0.68
CTSB-222ENST00000531551 FKBP3Q00688 224 aaKnown RBP19.27■□□□□ 0.68
CTSB-222ENST00000531551 MYL5Q02045 173 aa19.27■□□□□ 0.68
CTSB-222ENST00000531551 MCL1Q07820 350 aa19.27■□□□□ 0.68
CTSB-222ENST00000531551 EDRF1Q3B7T1 1238 aa19.27■□□□□ 0.68
CTSB-222ENST00000531551 HSP90AA4PQ58FG1 418 aa19.27■□□□□ 0.68
CTSB-222ENST00000531551 ZSWIM2Q8NEG5 633 aa19.27■□□□□ 0.68
CTSB-222ENST00000531551 ENOX1Q8TC92 643 aaKnown RBP19.27■□□□□ 0.68
CTSB-222ENST00000531551 STYXL1Q9Y6J8 313 aa19.27■□□□□ 0.68
CTSB-222ENST00000531551 SIP14410 1827 aa19.27■□□□□ 0.68
CTSB-222ENST00000531551 A0A0B4J269 797 aa19.26■□□□□ 0.67
CTSB-222ENST00000531551 ABLIM1O14639 778 aa19.26■□□□□ 0.67
CTSB-222ENST00000531551 CAVIN2O95810 425 aa19.26■□□□□ 0.67
CTSB-222ENST00000531551 APBB1IPQ7Z5R6 666 aaPredicted RBP19.26■□□□□ 0.67
CTSB-222ENST00000531551 RPUSD2Q8IZ73 545 aaKnown RBP19.26■□□□□ 0.67
CTSB-222ENST00000531551 CEP120Q8N960 986 aa19.26■□□□□ 0.67
CTSB-222ENST00000531551 FAM200AQ8TCP9 573 aa19.26■□□□□ 0.67
CTSB-222ENST00000531551 APBB2Q92870 758 aa19.26■□□□□ 0.67
CTSB-222ENST00000531551 CCDC51Q96ER9 411 aa19.26■□□□□ 0.67
CTSB-222ENST00000531551 BPIFA3Q9BQP9 254 aa19.26■□□□□ 0.67
CTSB-222ENST00000531551 FAM213AQ9BRX8 229 aa19.26■□□□□ 0.67
CTSB-222ENST00000531551 APOL6Q9BWW8 343 aa19.26■□□□□ 0.67
CTSB-222ENST00000531551 FTHL17Q9BXU8 183 aa19.26■□□□□ 0.67
CTSB-222ENST00000531551 NFE2L3Q9Y4A8 694 aa19.26■□□□□ 0.67
CTSB-222ENST00000531551 MCF2P10911 925 aa19.26■□□□□ 0.67
CTSB-222ENST00000531551 ACOT2P49753 483 aa19.26■□□□□ 0.67
CTSB-222ENST00000531551 TCTN1Q2MV58 587 aa19.26■□□□□ 0.67
CTSB-222ENST00000531551 DCAF4L1Q3SXM0 396 aa19.26■□□□□ 0.67
CTSB-222ENST00000531551 UBXN11Q5T124 520 aa19.26■□□□□ 0.67
CTSB-222ENST00000531551 SPATA1Q5VX52 437 aa19.26■□□□□ 0.67
CTSB-222ENST00000531551 LUZP1Q86V48 1076 aa19.26■□□□□ 0.67
CTSB-222ENST00000531551 XXYLT1Q8NBI6 393 aa19.26■□□□□ 0.67
CTSB-222ENST00000531551 LBHD1Q9BQE6 289 aaPredicted RBP19.26■□□□□ 0.67
CTSB-222ENST00000531551 HES2Q9Y543 173 aa19.26■□□□□ 0.67
CTSB-222ENST00000531551 NR2E3Q9Y5X4 410 aa19.26■□□□□ 0.67
CTSB-222ENST00000531551 SMTNL1A8MU46 457 aa19.25■□□□□ 0.67
CTSB-222ENST00000531551 FPGSQ05932 587 aa19.25■□□□□ 0.67
CTSB-222ENST00000531551 ZBTB41Q5SVQ8 909 aa19.25■□□□□ 0.67
CTSB-222ENST00000531551 DHX40Q8IX18 779 aaKnown RBP19.25■□□□□ 0.67
CTSB-222ENST00000531551 C12orf56Q8IXR9 622 aa19.25■□□□□ 0.67
CTSB-222ENST00000531551 GPD1LQ8N335 351 aa19.25■□□□□ 0.67
CTSB-222ENST00000531551 RNF169Q8NCN4 708 aa19.25■□□□□ 0.67
CTSB-222ENST00000531551 FAM105AQ9NUU6 356 aa19.25■□□□□ 0.67
CTSB-222ENST00000531551 FRMD4BQ9Y2L6 1034 aa19.25■□□□□ 0.67
CTSB-222ENST00000531551 ALPK3Q96L96 1907 aa19.25■□□□□ 0.67
CTSB-222ENST00000531551 OGTO15294 1046 aa19.24■□□□□ 0.67
CTSB-222ENST00000531551 LDHAP00338 332 aaKnown RBP19.24■□□□□ 0.67
CTSB-222ENST00000531551 CASP4P49662 377 aa19.24■□□□□ 0.67
CTSB-222ENST00000531551 PPIGQ13427 754 aaKnown RBP eCLIP19.24■□□□□ 0.672e-12■□□□□ 8.5
CTSB-222ENST00000531551 DSC3Q14574 896 aa19.24■□□□□ 0.67
CTSB-222ENST00000531551 CNKSR3Q6P9H4 555 aa19.24■□□□□ 0.67
CTSB-222ENST00000531551 RTN4RL1Q86UN2 441 aaPredicted RBP19.24■□□□□ 0.67
CTSB-222ENST00000531551 GAS2L3Q86XJ1 694 aa19.24■□□□□ 0.67
CTSB-222ENST00000531551 NXF3Q9H4D5 531 aaKnown RBP19.24■□□□□ 0.67
CTSB-222ENST00000531551 IL23AQ9NPF7 189 aa19.24■□□□□ 0.67
CTSB-222ENST00000531551 DMAC2Q9NW81 257 aa19.24■□□□□ 0.67
CTSB-222ENST00000531551 SNTG2Q9NY99 539 aa19.24■□□□□ 0.67
CTSB-222ENST00000531551 PCDHB2Q9Y5E7 798 aa19.24■□□□□ 0.67
CTSB-222ENST00000531551 EXTL3O43909 919 aa19.24■□□□□ 0.67
CTSB-222ENST00000531551 FGFR1OPO95684 399 aaKnown RBP19.24■□□□□ 0.67
CTSB-222ENST00000531551 TNFSF9P41273 254 aa19.24■□□□□ 0.67
CTSB-222ENST00000531551 IKBKEQ14164 716 aa19.24■□□□□ 0.67
CTSB-222ENST00000531551 IQCB1Q15051 598 aa19.24■□□□□ 0.67
CTSB-222ENST00000531551 NFIL3Q16649 462 aa19.24■□□□□ 0.67
CTSB-222ENST00000531551 LRRC55Q6ZSA7 311 aa19.24■□□□□ 0.67
CTSB-222ENST00000531551 SLC9A9Q8IVB4 645 aa19.24■□□□□ 0.67
CTSB-222ENST00000531551 LINC01599Q8WXQ3 324 aa19.24■□□□□ 0.67
CTSB-222ENST00000531551 RGS18Q9NS28 235 aa19.24■□□□□ 0.67
CTSB-222ENST00000531551 SAMSN1Q9NSI8 373 aaKnown RBP19.24■□□□□ 0.67
CTSB-222ENST00000531551 FANCLQ9NW38 375 aa19.24■□□□□ 0.67
CTSB-222ENST00000531551 IPPQ9Y573 584 aa19.24■□□□□ 0.67
CTSB-222ENST00000531551 TANC1Q9C0D5 1861 aa19.23■□□□□ 0.67
CTSB-222ENST00000531551 GOLGA6L19H0YKK7 550 aa19.23■□□□□ 0.67
CTSB-222ENST00000531551 KIAA0391O15091 583 aaKnown RBP19.23■□□□□ 0.67
CTSB-222ENST00000531551 AKAP3O75969 853 aa19.23■□□□□ 0.67
CTSB-222ENST00000531551 STAG3L1P0CL83 205 aa19.23■□□□□ 0.67
CTSB-222ENST00000531551 MYBPC2Q14324 1141 aa19.23■□□□□ 0.67
CTSB-222ENST00000531551 SNRNP35Q16560 246 aaKnown RBP19.23■□□□□ 0.67
CTSB-222ENST00000531551 FOXR2Q6PJQ5 311 aa19.23■□□□□ 0.67
CTSB-222ENST00000531551 CBWD2Q8IUF1 395 aa19.23■□□□□ 0.67
CTSB-222ENST00000531551 TMEM192Q8IY95 271 aa19.23■□□□□ 0.67
CTSB-222ENST00000531551 VWCEQ96DN2 955 aa19.23■□□□□ 0.67
CTSB-222ENST00000531551 FAM212AQ96EL1 285 aa19.23■□□□□ 0.67
CTSB-222ENST00000531551 PARP2Q9UGN5 583 aa19.23■□□□□ 0.67
CTSB-222ENST00000531551 ENPP3O14638 875 aa19.22■□□□□ 0.67
CTSB-222ENST00000531551 IKBKBO14920 756 aa19.22■□□□□ 0.67
CTSB-222ENST00000531551 PFKMP08237 780 aa19.22■□□□□ 0.67
CTSB-222ENST00000531551 EPB41P11171 864 aaKnown RBP19.22■□□□□ 0.67
CTSB-222ENST00000531551 AKAP5P24588 427 aa19.22■□□□□ 0.67
CTSB-222ENST00000531551 PSMC2P35998 433 aaKnown RBP19.22■□□□□ 0.67
CTSB-222ENST00000531551 NCAPHQ15003 741 aa19.22■□□□□ 0.67
CTSB-222ENST00000531551 CCDC40Q4G0X9 1142 aa19.22■□□□□ 0.67
CTSB-222ENST00000531551 SLC24A5Q71RS6 500 aa19.22■□□□□ 0.67
CTSB-222ENST00000531551 OTOP2Q7RTS6 562 aa19.22■□□□□ 0.67
CTSB-222ENST00000531551 CEP63Q96MT8 703 aa19.22■□□□□ 0.67
CTSB-222ENST00000531551 CCDC94Q9BW85 323 aaPredicted RBP19.22■□□□□ 0.67
CTSB-222ENST00000531551 TSPYL2Q9H2G4 693 aaPredicted RBP19.22■□□□□ 0.67
CTSB-222ENST00000531551 SCN5AQ14524 2016 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms