RNA–Protein interactions for RNA: ENST00000531430.5

NEDD8-206, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2

Gene NEDD8, Length 651 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-206ENST00000531430 CACNA1IQ9P0X4 2223 aa10.29□□□□□ -0.76
NEDD8-206ENST00000531430 ZBTB39O15060 712 aa10.29□□□□□ -0.76
NEDD8-206ENST00000531430 CCL16O15467 120 aa10.29□□□□□ -0.76
NEDD8-206ENST00000531430 KRT37O76014 449 aa10.29□□□□□ -0.76
NEDD8-206ENST00000531430 P4HBP07237 508 aaKnown RBP10.29□□□□□ -0.76
NEDD8-206ENST00000531430 IFNAR1P17181 557 aa10.29□□□□□ -0.76
NEDD8-206ENST00000531430 RFC5P40937 340 aa10.29□□□□□ -0.76
NEDD8-206ENST00000531430 CYP4A11Q02928 519 aa10.29□□□□□ -0.76
NEDD8-206ENST00000531430 STK3Q13188 491 aa10.29□□□□□ -0.76
NEDD8-206ENST00000531430 HTR4Q13639 388 aa10.29□□□□□ -0.76
NEDD8-206ENST00000531430 CTTNQ14247 550 aaKnown RBP10.29□□□□□ -0.76
NEDD8-206ENST00000531430 NTRK3Q16288 839 aa10.29□□□□□ -0.76
NEDD8-206ENST00000531430 TMEM132AQ24JP5 1023 aa10.29□□□□□ -0.76
NEDD8-206ENST00000531430 PPM1LQ5SGD2 360 aa10.29□□□□□ -0.76
NEDD8-206ENST00000531430 VARS2Q5ST30 1063 aaKnown RBP10.29□□□□□ -0.76
NEDD8-206ENST00000531430 LIN9Q5TKA1 542 aa10.29□□□□□ -0.76
NEDD8-206ENST00000531430 FUT10Q6P4F1 479 aa10.29□□□□□ -0.76
NEDD8-206ENST00000531430 NOTUMQ6P988 496 aa10.29□□□□□ -0.76
NEDD8-206ENST00000531430 FERMT3Q86UX7 667 aa10.29□□□□□ -0.76
NEDD8-206ENST00000531430 PJA1Q8NG27 643 aa10.29□□□□□ -0.76
NEDD8-206ENST00000531430 HDAC7Q8WUI4 952 aa10.29□□□□□ -0.76
NEDD8-206ENST00000531430 FGF14Q92915 247 aa10.29□□□□□ -0.76
NEDD8-206ENST00000531430 SECISBP2LQ93073 1101 aaKnown RBP10.29□□□□□ -0.76
NEDD8-206ENST00000531430 DYDC2Q96IM9 177 aa10.29□□□□□ -0.76
NEDD8-206ENST00000531430 MTRQ99707 1265 aa10.29□□□□□ -0.76
NEDD8-206ENST00000531430 SH3GLB2Q9NR46 395 aa10.29□□□□□ -0.76
NEDD8-206ENST00000531430 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP10.29□□□□□ -0.761e-6■■■□□ 15.3
NEDD8-206ENST00000531430 ZDHHC7Q9NXF8 308 aa10.29□□□□□ -0.76
NEDD8-206ENST00000531430 RGL1Q9NZL6 768 aa10.29□□□□□ -0.76
NEDD8-206ENST00000531430 CACNG4Q9UBN1 327 aa10.29□□□□□ -0.76
NEDD8-206ENST00000531430 KCNJ14Q9UNX9 436 aa10.29□□□□□ -0.76
NEDD8-206ENST00000531430 MTF2Q9Y483 593 aaPredicted RBP10.29□□□□□ -0.76
NEDD8-206ENST00000531430 FRYLO94915 3013 aa10.28□□□□□ -0.76
NEDD8-206ENST00000531430 CYP3A7-CYP3A51PA0A087WV96 503 aa10.28□□□□□ -0.76
NEDD8-206ENST00000531430 CCDC194A0A1B0GVG4 234 aa10.28□□□□□ -0.76
NEDD8-206ENST00000531430 KANSL1LA0AUZ9 987 aa10.28□□□□□ -0.76
NEDD8-206ENST00000531430 ANHXE9PGG2 379 aa10.28□□□□□ -0.76
NEDD8-206ENST00000531430 SLC37A4O43826 429 aa10.28□□□□□ -0.76
NEDD8-206ENST00000531430 CCNT1O60563 726 aaKnown RBP10.28□□□□□ -0.76
NEDD8-206ENST00000531430 TSPAN1O60635 241 aa10.28□□□□□ -0.76
NEDD8-206ENST00000531430 ZMYND10O75800 440 aa10.28□□□□□ -0.76
NEDD8-206ENST00000531430 NPTXRO95502 500 aa10.28□□□□□ -0.76
NEDD8-206ENST00000531430 CYP3A7P24462 503 aa10.28□□□□□ -0.76
NEDD8-206ENST00000531430 PDIA3P30101 505 aaKnown RBP10.28□□□□□ -0.76
NEDD8-206ENST00000531430 YWHABP31946 246 aaKnown RBP10.28□□□□□ -0.76
NEDD8-206ENST00000531430 STARD6P59095 220 aa10.28□□□□□ -0.76
NEDD8-206ENST00000531430 TFDP1Q14186 410 aa10.28□□□□□ -0.76
NEDD8-206ENST00000531430 EMC2Q15006 297 aa10.28□□□□□ -0.76
NEDD8-206ENST00000531430 FAM171A1Q5VUB5 890 aa10.28□□□□□ -0.76
NEDD8-206ENST00000531430 TSSK4Q6SA08 328 aa10.28□□□□□ -0.76
NEDD8-206ENST00000531430 MAEAQ7L5Y9 396 aa10.28□□□□□ -0.76
NEDD8-206ENST00000531430 ETNPPLQ8TBG4 499 aa10.28□□□□□ -0.76
NEDD8-206ENST00000531430 CHAMP1Q96JM3 812 aa10.28□□□□□ -0.76
NEDD8-206ENST00000531430 CCDC43Q96MW1 224 aaKnown RBP10.28□□□□□ -0.76
NEDD8-206ENST00000531430 KXD1Q9BQD3 176 aa10.28□□□□□ -0.76
NEDD8-206ENST00000531430 CSRNP2Q9H175 543 aa10.28□□□□□ -0.76
NEDD8-206ENST00000531430 SLC2A4RGQ9NR83 387 aa10.28□□□□□ -0.76
NEDD8-206ENST00000531430 CHST7Q9NS84 486 aa10.28□□□□□ -0.76
NEDD8-206ENST00000531430 DLGAP2Q9P1A6 1054 aa10.28□□□□□ -0.76
NEDD8-206ENST00000531430 WRAP73Q9P2S5 460 aaPredicted RBP10.28□□□□□ -0.76
NEDD8-206ENST00000531430 ADAM28Q9UKQ2 775 aa10.28□□□□□ -0.76
NEDD8-206ENST00000531430 CDH7Q9ULB5 785 aa10.28□□□□□ -0.76
NEDD8-206ENST00000531430 USP18Q9UMW8 372 aa10.28□□□□□ -0.76
NEDD8-206ENST00000531430 GIT1Q9Y2X7 761 aa10.28□□□□□ -0.76
NEDD8-206ENST00000531430 SNX14Q9Y5W7 946 aa10.28□□□□□ -0.76
NEDD8-206ENST00000531430 DMXL1Q9Y485 3027 aa10.28□□□□□ -0.76
NEDD8-206ENST00000531430 NCOR2Q9Y618 2525 aa10.27□□□□□ -0.77
NEDD8-206ENST00000531430 A0A087WWV3 80 aa10.27□□□□□ -0.77
NEDD8-206ENST00000531430 DCDC2BA2VCK2 349 aa10.27□□□□□ -0.77
NEDD8-206ENST00000531430 CASTOR2A6NHX0 329 aa10.27□□□□□ -0.77
NEDD8-206ENST00000531430 CDC45O75419 566 aa10.27□□□□□ -0.77
NEDD8-206ENST00000531430 BAG4O95429 457 aaKnown RBP10.27□□□□□ -0.77
NEDD8-206ENST00000531430 C8AP07357 584 aa10.27□□□□□ -0.77
NEDD8-206ENST00000531430 LIG1P18858 919 aa10.27□□□□□ -0.77
NEDD8-206ENST00000531430 KCNA4P22459 653 aa10.27□□□□□ -0.77
NEDD8-206ENST00000531430 RPS6KB1P23443 525 aa10.27□□□□□ -0.77
NEDD8-206ENST00000531430 AXLP30530 894 aa10.27□□□□□ -0.77
NEDD8-206ENST00000531430 ATXN1P54253 815 aaKnown RBP10.27□□□□□ -0.77
NEDD8-206ENST00000531430 CREMQ03060 361 aa10.27□□□□□ -0.77
NEDD8-206ENST00000531430 EPHA7Q15375 998 aa10.27□□□□□ -0.77
NEDD8-206ENST00000531430 MLF2Q15773 248 aaPredicted RBP10.27□□□□□ -0.77
NEDD8-206ENST00000531430 LPAL2Q16609 132 aa10.27□□□□□ -0.77
NEDD8-206ENST00000531430 LILRA6Q6PI73 481 aa10.27□□□□□ -0.77
NEDD8-206ENST00000531430 CPLX2Q6PUV4 134 aaKnown RBP10.27□□□□□ -0.77
NEDD8-206ENST00000531430 B3GNT9Q6UX72 402 aa10.27□□□□□ -0.77
NEDD8-206ENST00000531430 MTSS1LQ765P7 747 aa10.27□□□□□ -0.77
NEDD8-206ENST00000531430 KRT25Q7Z3Z0 450 aa10.27□□□□□ -0.77
NEDD8-206ENST00000531430 SUMF1Q8NBK3 374 aa10.27□□□□□ -0.77
NEDD8-206ENST00000531430 ITFG1Q8TB96 612 aa10.27□□□□□ -0.77
NEDD8-206ENST00000531430 ING5Q8WYH8 240 aa10.27□□□□□ -0.77
NEDD8-206ENST00000531430 FGF13Q92913 245 aa10.27□□□□□ -0.77
NEDD8-206ENST00000531430 MCRS1Q96EZ8 462 aa10.27□□□□□ -0.77
NEDD8-206ENST00000531430 FAM20AQ96MK3 541 aa10.27□□□□□ -0.77
NEDD8-206ENST00000531430 AIFM3Q96NN9 605 aa10.27□□□□□ -0.77
NEDD8-206ENST00000531430 LXNQ9BS40 222 aa10.27□□□□□ -0.77
NEDD8-206ENST00000531430 PHF20Q9BVI0 1012 aa10.27□□□□□ -0.77
NEDD8-206ENST00000531430 NXF3Q9H4D5 531 aaKnown RBP10.27□□□□□ -0.77
NEDD8-206ENST00000531430 DHX33Q9H6R0 707 aaKnown RBP10.27□□□□□ -0.77
NEDD8-206ENST00000531430 FNIP2Q9P278 1114 aa10.27□□□□□ -0.77
NEDD8-206ENST00000531430 DENND4AQ7Z401 1863 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms