RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 FRMD4BQ9Y2L6 1034 aa20.79■□□□□ 0.92
SMPD1-205ENST00000531303 ALPK3Q96L96 1907 aa20.79■□□□□ 0.92
SMPD1-205ENST00000531303 KCNJ18B7U540 433 aa20.78■□□□□ 0.92
SMPD1-205ENST00000531303 ABLIM1O14639 778 aa20.78■□□□□ 0.92
SMPD1-205ENST00000531303 AKAP3O75969 853 aa20.78■□□□□ 0.92
SMPD1-205ENST00000531303 NPTXRO95502 500 aa20.78■□□□□ 0.92
SMPD1-205ENST00000531303 PROZP22891 400 aa20.78■□□□□ 0.92
SMPD1-205ENST00000531303 ACOT2P49753 483 aa20.78■□□□□ 0.92
SMPD1-205ENST00000531303 OSTNP61366 133 aa20.78■□□□□ 0.92
SMPD1-205ENST00000531303 KCNJ12Q14500 433 aa20.78■□□□□ 0.92
SMPD1-205ENST00000531303 ZBTB41Q5SVQ8 909 aa20.78■□□□□ 0.92
SMPD1-205ENST00000531303 CDKAL1Q5VV42 579 aa20.78■□□□□ 0.92
SMPD1-205ENST00000531303 FILIP1Q7Z7B0 1213 aa20.78■□□□□ 0.92
SMPD1-205ENST00000531303 SLC9A9Q8IVB4 645 aa20.78■□□□□ 0.92
SMPD1-205ENST00000531303 ZC3H3Q8IXZ2 948 aaKnown RBP20.78■□□□□ 0.92
SMPD1-205ENST00000531303 THNSL1Q8IYQ7 743 aa20.78■□□□□ 0.92
SMPD1-205ENST00000531303 TNS4Q8IZW8 715 aa20.78■□□□□ 0.92
SMPD1-205ENST00000531303 CNOT6LQ96LI5 555 aaKnown RBP20.78■□□□□ 0.92
SMPD1-205ENST00000531303 ADPGKQ9BRR6 497 aa20.78■□□□□ 0.92
SMPD1-205ENST00000531303 WNT8AQ9H1J5 351 aa20.78■□□□□ 0.92
SMPD1-205ENST00000531303 TRIM43BA6NCK2 446 aa20.77■□□□□ 0.92
SMPD1-205ENST00000531303 NBNO60934 754 aa20.77■□□□□ 0.92
SMPD1-205ENST00000531303 IBSPP21815 317 aaPredicted RBP20.77■□□□□ 0.92
SMPD1-205ENST00000531303 AXLP30530 894 aa20.77■□□□□ 0.92
SMPD1-205ENST00000531303 MCL1Q07820 350 aa20.77■□□□□ 0.92
SMPD1-205ENST00000531303 MYBPC2Q14324 1141 aa20.77■□□□□ 0.92
SMPD1-205ENST00000531303 TWF2Q6IBS0 349 aaKnown RBP20.77■□□□□ 0.92
SMPD1-205ENST00000531303 CBWD2Q8IUF1 395 aa20.77■□□□□ 0.92
SMPD1-205ENST00000531303 FAM114A1Q8IWE2 563 aa20.77■□□□□ 0.92
SMPD1-205ENST00000531303 FAM186BQ8IYM0 893 aa20.77■□□□□ 0.92
SMPD1-205ENST00000531303 GPD1LQ8N335 351 aa20.77■□□□□ 0.92
SMPD1-205ENST00000531303 USP38Q8NB14 1042 aa20.77■□□□□ 0.92
SMPD1-205ENST00000531303 TRIM43Q96BQ3 446 aaPredicted RBP20.77■□□□□ 0.92
SMPD1-205ENST00000531303 EIF2AQ9BY44 585 aaKnown RBP20.77■□□□□ 0.92
SMPD1-205ENST00000531303 TET1Q8NFU7 2136 aa20.77■□□□□ 0.91
SMPD1-205ENST00000531303 FSD2A1L4K1 749 aa20.76■□□□□ 0.91
SMPD1-205ENST00000531303 EXTL3O43909 919 aa20.76■□□□□ 0.91
SMPD1-205ENST00000531303 EPB41P11171 864 aaKnown RBP20.76■□□□□ 0.91
SMPD1-205ENST00000531303 ZNF18P17022 549 aa20.76■□□□□ 0.91
SMPD1-205ENST00000531303 PSMC2P35998 433 aaKnown RBP20.76■□□□□ 0.91
SMPD1-205ENST00000531303 MTIF2P46199 727 aaKnown RBP20.76■□□□□ 0.91
SMPD1-205ENST00000531303 TCP11X2Q5H9J9 407 aa20.76■□□□□ 0.91
SMPD1-205ENST00000531303 SLC27A1Q6PCB7 646 aa20.76■□□□□ 0.91
SMPD1-205ENST00000531303 DEFB128Q7Z7B8 93 aa20.76■□□□□ 0.91
SMPD1-205ENST00000531303 CEP120Q8N960 986 aa20.76■□□□□ 0.91
SMPD1-205ENST00000531303 IFIH1Q9BYX4 1025 aaKnown RBP20.76■□□□□ 0.91
SMPD1-205ENST00000531303 SQORQ9Y6N5 450 aa20.76■□□□□ 0.91
SMPD1-205ENST00000531303 TANC1Q9C0D5 1861 aa20.76■□□□□ 0.91
SMPD1-205ENST00000531303 OGTO15294 1046 aa20.75■□□□□ 0.91
SMPD1-205ENST00000531303 MCF2P10911 925 aa20.75■□□□□ 0.91
SMPD1-205ENST00000531303 RAG1P15918 1043 aa20.75■□□□□ 0.91
SMPD1-205ENST00000531303 ZSCAN20P17040 1043 aaPredicted RBP20.75■□□□□ 0.91
SMPD1-205ENST00000531303 TNFSF9P41273 254 aa20.75■□□□□ 0.91
SMPD1-205ENST00000531303 GPNMBQ14956 572 aa20.75■□□□□ 0.91
SMPD1-205ENST00000531303 SNRNP35Q16560 246 aaKnown RBP20.75■□□□□ 0.91
SMPD1-205ENST00000531303 TRIM6Q9C030 488 aaPredicted RBP20.75■□□□□ 0.91
SMPD1-205ENST00000531303 TMX1Q9H3N1 280 aa20.75■□□□□ 0.91
SMPD1-205ENST00000531303 GRPEL1Q9HAV7 217 aa20.75■□□□□ 0.91
SMPD1-205ENST00000531303 TAB2Q9NYJ8 693 aa20.75■□□□□ 0.91
SMPD1-205ENST00000531303 SLC16A3O15427 465 aaKnown RBP20.75■□□□□ 0.91
SMPD1-205ENST00000531303 GNA14O95837 355 aa20.75■□□□□ 0.91
SMPD1-205ENST00000531303 ADRB2P07550 413 aa20.75■□□□□ 0.91
SMPD1-205ENST00000531303 ITGB8P26012 769 aa20.75■□□□□ 0.91
SMPD1-205ENST00000531303 UBXN11Q5T124 520 aa20.75■□□□□ 0.91
SMPD1-205ENST00000531303 APBB1IPQ7Z5R6 666 aaPredicted RBP20.75■□□□□ 0.91
SMPD1-205ENST00000531303 TMEM192Q8IY95 271 aa20.75■□□□□ 0.91
SMPD1-205ENST00000531303 C7orf61Q8IZ16 206 aa20.75■□□□□ 0.91
SMPD1-205ENST00000531303 APOL6Q9BWW8 343 aa20.75■□□□□ 0.91
SMPD1-205ENST00000531303 ARMCX3Q9UH62 379 aaPredicted RBP20.75■□□□□ 0.91
SMPD1-205ENST00000531303 ZNF233A6NK53 670 aa20.74■□□□□ 0.91
SMPD1-205ENST00000531303 KIAA0355O15063 1070 aa20.74■□□□□ 0.91
SMPD1-205ENST00000531303 KIAA0391O15091 583 aaKnown RBP20.74■□□□□ 0.91
SMPD1-205ENST00000531303 MGEA5O60502 916 aa20.74■□□□□ 0.91
SMPD1-205ENST00000531303 LDHAP00338 332 aaKnown RBP20.74■□□□□ 0.91
SMPD1-205ENST00000531303 SERPINC1P01008 464 aa20.74■□□□□ 0.91
SMPD1-205ENST00000531303 TIMP1P01033 207 aa20.74■□□□□ 0.91
SMPD1-205ENST00000531303 KRT31Q15323 416 aa20.74■□□□□ 0.91
SMPD1-205ENST00000531303 UVSSAQ2YD98 709 aa20.74■□□□□ 0.91
SMPD1-205ENST00000531303 DCAF4L1Q3SXM0 396 aa20.74■□□□□ 0.91
SMPD1-205ENST00000531303 CRELD2Q6UXH1 353 aaPredicted RBP20.74■□□□□ 0.91
SMPD1-205ENST00000531303 ANKRD20A12PQ8NF67 263 aa20.74■□□□□ 0.91
SMPD1-205ENST00000531303 TMEM174Q8WUU8 243 aa20.74■□□□□ 0.91
SMPD1-205ENST00000531303 FAM212AQ96EL1 285 aa20.74■□□□□ 0.91
SMPD1-205ENST00000531303 ADAM2Q99965 735 aa20.74■□□□□ 0.91
SMPD1-205ENST00000531303 KIAA1586Q9HCI6 787 aa20.74■□□□□ 0.91
SMPD1-205ENST00000531303 CHST12Q9NRB3 414 aa20.74■□□□□ 0.91
SMPD1-205ENST00000531303 HES2Q9Y543 173 aa20.74■□□□□ 0.91
SMPD1-205ENST00000531303 PES1O00541 588 aaKnown RBP20.73■□□□□ 0.91
SMPD1-205ENST00000531303 STAG3L1P0CL83 205 aa20.73■□□□□ 0.91
SMPD1-205ENST00000531303 KRT13P13646 458 aa20.73■□□□□ 0.91
SMPD1-205ENST00000531303 PRKCSHP14314 528 aaPredicted RBP20.73■□□□□ 0.91
SMPD1-205ENST00000531303 EEF1GP26641 437 aaKnown RBP20.73■□□□□ 0.91
SMPD1-205ENST00000531303 FANCCQ00597 558 aa20.73■□□□□ 0.91
SMPD1-205ENST00000531303 SPAG1Q07617 926 aa20.73■□□□□ 0.91
SMPD1-205ENST00000531303 DCAF17Q5H9S7 520 aaPredicted RBP20.73■□□□□ 0.91
SMPD1-205ENST00000531303 FRMD5Q7Z6J6 570 aa20.73■□□□□ 0.91
SMPD1-205ENST00000531303 DBF4BQ8NFT6 615 aa20.73■□□□□ 0.91
SMPD1-205ENST00000531303 SEPT8Q92599 483 aa20.73■□□□□ 0.91
SMPD1-205ENST00000531303 CCDC127Q96BQ5 260 aa20.73■□□□□ 0.91
SMPD1-205ENST00000531303 CCDC51Q96ER9 411 aa20.73■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms