RNA–Protein interactions for RNA: ENST00000531056.5

UBXN1-211, Transcript of UBX domain protein 1, humanhuman

TSL 4

Gene UBXN1, Length 560 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-211ENST00000531056 K7ERI5 159 aa20.9■□□□□ 0.94
UBXN1-211ENST00000531056 GLP2RO95838 553 aa20.9■□□□□ 0.94
UBXN1-211ENST00000531056 HSP90AA1P07900 732 aaKnown RBP20.9■□□□□ 0.94
UBXN1-211ENST00000531056 DUSP6Q16828 381 aa20.9■□□□□ 0.94
UBXN1-211ENST00000531056 TMEM132AQ24JP5 1023 aa20.9■□□□□ 0.94
UBXN1-211ENST00000531056 ATF7IP2Q5U623 682 aa20.9■□□□□ 0.94
UBXN1-211ENST00000531056 EP400NLQ6ZTU2 488 aa20.9■□□□□ 0.94
UBXN1-211ENST00000531056 DDX53Q86TM3 631 aaKnown RBP20.9■□□□□ 0.94
UBXN1-211ENST00000531056 RBM23Q86U06 439 aaKnown RBP20.9■□□□□ 0.94
UBXN1-211ENST00000531056 GPBP1Q86WP2 473 aa20.9■□□□□ 0.94
UBXN1-211ENST00000531056 FAM193BQ96PV7 902 aaPredicted RBP20.9■□□□□ 0.94
UBXN1-211ENST00000531056 ADPGKQ9BRR6 497 aa20.9■□□□□ 0.94
UBXN1-211ENST00000531056 VN1R3Q9BXE9 311 aa20.9■□□□□ 0.94
UBXN1-211ENST00000531056 ZBP1Q9H171 429 aa20.9■□□□□ 0.94
UBXN1-211ENST00000531056 TLE6Q9H808 572 aa20.9■□□□□ 0.94
UBXN1-211ENST00000531056 RBM19Q9Y4C8 960 aaKnown RBP20.9■□□□□ 0.94
UBXN1-211ENST00000531056 SLC16A4O15374 487 aa20.89■□□□□ 0.93
UBXN1-211ENST00000531056 PDIA4P13667 645 aaKnown RBP20.89■□□□□ 0.93
UBXN1-211ENST00000531056 CACNB1Q02641 598 aaPredicted RBP20.89■□□□□ 0.93
UBXN1-211ENST00000531056 MCM6Q14566 821 aa20.89■□□□□ 0.93
UBXN1-211ENST00000531056 DCAF4L1Q3SXM0 396 aa20.89■□□□□ 0.93
UBXN1-211ENST00000531056 RASSF8Q8NHQ8 419 aa20.89■□□□□ 0.93
UBXN1-211ENST00000531056 LARP4BQ92615 738 aaKnown RBP20.89■□□□□ 0.93
UBXN1-211ENST00000531056 NECAB3Q96P71 396 aaPredicted RBP20.89■□□□□ 0.93
UBXN1-211ENST00000531056 CDCA3Q99618 268 aaPredicted RBP20.89■□□□□ 0.93
UBXN1-211ENST00000531056 ACO2Q99798 780 aaKnown RBP20.89■□□□□ 0.93
UBXN1-211ENST00000531056 REEP2Q9BRK0 252 aa20.89■□□□□ 0.93
UBXN1-211ENST00000531056 MARCH5Q9NX47 278 aa20.89■□□□□ 0.93
UBXN1-211ENST00000531056 SNTG2Q9NY99 539 aa20.89■□□□□ 0.93
UBXN1-211ENST00000531056 DAXXQ9UER7 740 aaPredicted RBP20.89■□□□□ 0.93
UBXN1-211ENST00000531056 PARP2Q9UGN5 583 aa20.89■□□□□ 0.93
UBXN1-211ENST00000531056 ODF2LQ9ULJ1 636 aa20.89■□□□□ 0.93
UBXN1-211ENST00000531056 TNFSF13BQ9Y275 285 aa20.89■□□□□ 0.93
UBXN1-211ENST00000531056 GRXCR2A6NFK2 248 aa20.88■□□□□ 0.93
UBXN1-211ENST00000531056 NRP1O14786 923 aa20.88■□□□□ 0.93
UBXN1-211ENST00000531056 PER2O15055 1255 aa20.88■□□□□ 0.93
UBXN1-211ENST00000531056 RECQL4O94761 1208 aa20.88■□□□□ 0.93
UBXN1-211ENST00000531056 ZSCAN22P10073 491 aaPredicted RBP20.88■□□□□ 0.93
UBXN1-211ENST00000531056 GRIK3Q13003 919 aa20.88■□□□□ 0.93
UBXN1-211ENST00000531056 KCNC3Q14003 757 aa20.88■□□□□ 0.93
UBXN1-211ENST00000531056 SMC1AQ14683 1233 aaKnown RBP20.88■□□□□ 0.93
UBXN1-211ENST00000531056 PUS10Q3MIT2 529 aaKnown RBP20.88■□□□□ 0.93
UBXN1-211ENST00000531056 PTCRAQ6ISU1 281 aaPredicted RBP20.88■□□□□ 0.93
UBXN1-211ENST00000531056 TMC7Q7Z402 723 aa20.88■□□□□ 0.93
UBXN1-211ENST00000531056 VPS52Q8N1B4 723 aa20.88■□□□□ 0.93
UBXN1-211ENST00000531056 LINC00301Q8NCQ3 95 aa20.88■□□□□ 0.93
UBXN1-211ENST00000531056 TMEM161BQ8NDZ6 487 aa20.88■□□□□ 0.93
UBXN1-211ENST00000531056 VN1R2Q8NFZ6 395 aa20.88■□□□□ 0.93
UBXN1-211ENST00000531056 MSLNLQ96KJ4 702 aa20.88■□□□□ 0.93
UBXN1-211ENST00000531056 MRPL4Q9BYD3 311 aaKnown RBP20.88■□□□□ 0.93
UBXN1-211ENST00000531056 PTPRHQ9HD43 1115 aa20.88■□□□□ 0.93
UBXN1-211ENST00000531056 KLK14Q9P0G3 267 aa20.88■□□□□ 0.93
UBXN1-211ENST00000531056 CLEC1BQ9P126 229 aa20.88■□□□□ 0.93
UBXN1-211ENST00000531056 FAN1Q9Y2M0 1017 aa20.88■□□□□ 0.93
UBXN1-211ENST00000531056 CUL9Q8IWT3 2517 aa20.87■□□□□ 0.93
UBXN1-211ENST00000531056 FSD2A1L4K1 749 aa20.87■□□□□ 0.93
UBXN1-211ENST00000531056 C2orf71A6NGG8 1288 aa20.87■□□□□ 0.93
UBXN1-211ENST00000531056 ALDH2P05091 517 aa20.87■□□□□ 0.93
UBXN1-211ENST00000531056 MAPTP10636 758 aaKnown RBP20.87■□□□□ 0.93
UBXN1-211ENST00000531056 IL9P15248 144 aa20.87■□□□□ 0.93
UBXN1-211ENST00000531056 NDUFV1P49821 464 aa20.87■□□□□ 0.93
UBXN1-211ENST00000531056 ZNF131P52739 623 aa20.87■□□□□ 0.93
UBXN1-211ENST00000531056 NCKAP1LP55160 1127 aa20.87■□□□□ 0.93
UBXN1-211ENST00000531056 DHX8Q14562 1220 aaKnown RBP20.87■□□□□ 0.93
UBXN1-211ENST00000531056 MRPL43Q8N983 215 aaKnown RBP20.87■□□□□ 0.93
UBXN1-211ENST00000531056 KRI1Q8N9T8 703 aaKnown RBP20.87■□□□□ 0.93
UBXN1-211ENST00000531056 KCNN1Q92952 543 aa20.87■□□□□ 0.93
UBXN1-211ENST00000531056 KCNG1Q9UIX4 513 aa20.87■□□□□ 0.93
UBXN1-211ENST00000531056 ABLIM1O14639 778 aa20.86■□□□□ 0.93
UBXN1-211ENST00000531056 PTGESO14684 152 aa20.86■□□□□ 0.93
UBXN1-211ENST00000531056 EFEMP2O95967 443 aa20.86■□□□□ 0.93
UBXN1-211ENST00000531056 F13A1P00488 732 aa20.86■□□□□ 0.93
UBXN1-211ENST00000531056 CTSAP10619 480 aa20.86■□□□□ 0.93
UBXN1-211ENST00000531056 PROZP22891 400 aa20.86■□□□□ 0.93
UBXN1-211ENST00000531056 DDIT3P35638 169 aa20.86■□□□□ 0.93
UBXN1-211ENST00000531056 SMTNP53814 917 aa20.86■□□□□ 0.93
UBXN1-211ENST00000531056 RBM10P98175 930 aaKnown RBP20.86■□□□□ 0.93
UBXN1-211ENST00000531056 PKP1Q13835 747 aa20.86■□□□□ 0.93
UBXN1-211ENST00000531056 GIT2Q14161 759 aa20.86■□□□□ 0.93
UBXN1-211ENST00000531056 FOXD4L5Q5VV16 416 aaPredicted RBP20.86■□□□□ 0.93
UBXN1-211ENST00000531056 SPRYD3Q8NCJ5 442 aa20.86■□□□□ 0.93
UBXN1-211ENST00000531056 FOXD4L4Q8WXT5 416 aaPredicted RBP20.86■□□□□ 0.93
UBXN1-211ENST00000531056 ZNF396Q96N95 335 aaPredicted RBP20.86■□□□□ 0.93
UBXN1-211ENST00000531056 RPS6KC1Q96S38 1066 aa20.86■□□□□ 0.93
UBXN1-211ENST00000531056 TARS2Q9BW92 718 aaKnown RBP20.86■□□□□ 0.93
UBXN1-211ENST00000531056 CDT1Q9H211 546 aa20.86■□□□□ 0.93
UBXN1-211ENST00000531056 CXCL16Q9H2A7 254 aa20.86■□□□□ 0.93
UBXN1-211ENST00000531056 LARSQ9P2J5 1176 aaKnown RBP20.86■□□□□ 0.93
UBXN1-211ENST00000531056 STK17AQ9UEE5 414 aa20.86■□□□□ 0.93
UBXN1-211ENST00000531056 CCDC39Q9UFE4 941 aa20.86■□□□□ 0.93
UBXN1-211ENST00000531056 BARX2Q9UMQ3 279 aaPredicted RBP20.86■□□□□ 0.93
UBXN1-211ENST00000531056 IRAK3Q9Y616 596 aa20.86■□□□□ 0.93
UBXN1-211ENST00000531056 TTC28Q96AY4 2481 aa20.85■□□□□ 0.93
UBXN1-211ENST00000531056 MUC3AQ02505 3323 aa20.85■□□□□ 0.93
UBXN1-211ENST00000531056 TNFRSF10AO00220 468 aa20.85■□□□□ 0.93
UBXN1-211ENST00000531056 OR1G1P47890 313 aa20.85■□□□□ 0.93
UBXN1-211ENST00000531056 STK38Q15208 465 aa20.85■□□□□ 0.93
UBXN1-211ENST00000531056 CLUL1Q15846 466 aa20.85■□□□□ 0.93
UBXN1-211ENST00000531056 APBB1IPQ7Z5R6 666 aaPredicted RBP20.85■□□□□ 0.93
UBXN1-211ENST00000531056 RNF168Q8IYW5 571 aaPredicted RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms