RNA–Protein interactions for RNA: ENST00000529994.1

SF3B2-208, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 2

Gene SF3B2, Length 1,004 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-208ENST00000529994 B3GNT9Q6UX72 402 aa12.64□□□□□ -0.39
SF3B2-208ENST00000529994 SRGAP1Q7Z6B7 1085 aa12.64□□□□□ -0.39
SF3B2-208ENST00000529994 TRIM22Q8IYM9 498 aa12.64□□□□□ -0.39
SF3B2-208ENST00000529994 RNF168Q8IYW5 571 aaPredicted RBP12.64□□□□□ -0.39
SF3B2-208ENST00000529994 FBXL16Q8N461 479 aa12.64□□□□□ -0.39
SF3B2-208ENST00000529994 CCDC148Q8NFR7 591 aa12.64□□□□□ -0.39
SF3B2-208ENST00000529994 SLC7A3Q8WY07 619 aa12.64□□□□□ -0.39
SF3B2-208ENST00000529994 FGF14Q92915 247 aa12.64□□□□□ -0.39
SF3B2-208ENST00000529994 CPB2Q96IY4 423 aa12.64□□□□□ -0.39
SF3B2-208ENST00000529994 RNF26Q9BY78 433 aaPredicted RBP12.64□□□□□ -0.39
SF3B2-208ENST00000529994 RHOBTB2Q9BYZ6 727 aa12.64□□□□□ -0.39
SF3B2-208ENST00000529994 GPR62Q9BZJ7 368 aa12.64□□□□□ -0.39
SF3B2-208ENST00000529994 PRKD2Q9BZL6 878 aa12.64□□□□□ -0.39
SF3B2-208ENST00000529994 TM6SF1Q9BZW5 370 aa12.64□□□□□ -0.39
SF3B2-208ENST00000529994 PLEKHA4Q9H4M7 779 aa12.64□□□□□ -0.39
SF3B2-208ENST00000529994 SLC2A4RGQ9NR83 387 aa12.64□□□□□ -0.39
SF3B2-208ENST00000529994 IPPQ9Y573 584 aa12.64□□□□□ -0.39
SF3B2-208ENST00000529994 LAMTOR5O43504 91 aa12.63□□□□□ -0.39
SF3B2-208ENST00000529994 EFEMP2O95967 443 aa12.63□□□□□ -0.39
SF3B2-208ENST00000529994 IFNAR1P17181 557 aa12.63□□□□□ -0.39
SF3B2-208ENST00000529994 CD72P21854 359 aa12.63□□□□□ -0.39
SF3B2-208ENST00000529994 STARD6P59095 220 aa12.63□□□□□ -0.39
SF3B2-208ENST00000529994 PSMC5P62195 406 aa12.63□□□□□ -0.39
SF3B2-208ENST00000529994 DSC1Q08554 894 aa12.63□□□□□ -0.39
SF3B2-208ENST00000529994 VARS2Q5ST30 1063 aaKnown RBP12.63□□□□□ -0.39
SF3B2-208ENST00000529994 FUT10Q6P4F1 479 aa12.63□□□□□ -0.39
SF3B2-208ENST00000529994 GRASPQ7Z6J2 395 aaPredicted RBP12.63□□□□□ -0.39
SF3B2-208ENST00000529994 RNF149Q8NC42 400 aa12.63□□□□□ -0.39
SF3B2-208ENST00000529994 HDAC7Q8WUI4 952 aa12.63□□□□□ -0.39
SF3B2-208ENST00000529994 PSPC1Q8WXF1 523 aaKnown RBP12.63□□□□□ -0.39
SF3B2-208ENST00000529994 SHDQ96IW2 340 aa12.63□□□□□ -0.39
SF3B2-208ENST00000529994 CEP170P1Q96L14 293 aa12.63□□□□□ -0.39
SF3B2-208ENST00000529994 JPH2Q9BR39 696 aaPredicted RBP12.63□□□□□ -0.39
SF3B2-208ENST00000529994 BCO2Q9BYV7 579 aa12.63□□□□□ -0.39
SF3B2-208ENST00000529994 UBN1Q9NPG3 1134 aa12.63□□□□□ -0.39
SF3B2-208ENST00000529994 CHST7Q9NS84 486 aa12.63□□□□□ -0.39
SF3B2-208ENST00000529994 CACNG4Q9UBN1 327 aa12.63□□□□□ -0.39
SF3B2-208ENST00000529994 MAP1BP46821 2468 aaKnown RBP12.62□□□□□ -0.39
SF3B2-208ENST00000529994 KANSL1LA0AUZ9 987 aa12.62□□□□□ -0.39
SF3B2-208ENST00000529994 NR1I2O75469 434 aa12.62□□□□□ -0.39
SF3B2-208ENST00000529994 ZMYND10O75800 440 aa12.62□□□□□ -0.39
SF3B2-208ENST00000529994 ERLIN2O94905 339 aa12.62□□□□□ -0.39
SF3B2-208ENST00000529994 ATXN1P54253 815 aaKnown RBP12.62□□□□□ -0.39
SF3B2-208ENST00000529994 LILRA6Q6PI73 481 aa12.62□□□□□ -0.39
SF3B2-208ENST00000529994 CPLX2Q6PUV4 134 aaKnown RBP12.62□□□□□ -0.39
SF3B2-208ENST00000529994 PRSS55Q6UWB4 352 aaPredicted RBP12.62□□□□□ -0.39
SF3B2-208ENST00000529994 ETNPPLQ8TBG4 499 aa12.62□□□□□ -0.39
SF3B2-208ENST00000529994 AIFM3Q96NN9 605 aa12.62□□□□□ -0.39
SF3B2-208ENST00000529994 COLEC11Q9BWP8 271 aa12.62□□□□□ -0.39
SF3B2-208ENST00000529994 SLKQ9H2G2 1235 aaPredicted RBP12.62□□□□□ -0.39
SF3B2-208ENST00000529994 ZDHHC7Q9NXF8 308 aa12.62□□□□□ -0.39
SF3B2-208ENST00000529994 WRAP73Q9P2S5 460 aaPredicted RBP12.62□□□□□ -0.39
SF3B2-208ENST00000529994 POLIQ9UNA4 740 aa12.62□□□□□ -0.39
SF3B2-208ENST00000529994 ARID2Q68CP9 1835 aa12.62□□□□□ -0.39
SF3B2-208ENST00000529994 DCDC2BA2VCK2 349 aa12.61□□□□□ -0.39
SF3B2-208ENST00000529994 FAM170BA6NMN3 283 aa12.61□□□□□ -0.39
SF3B2-208ENST00000529994 SLC37A4O43826 429 aa12.61□□□□□ -0.39
SF3B2-208ENST00000529994 TSPAN1O60635 241 aa12.61□□□□□ -0.39
SF3B2-208ENST00000529994 AKAP5P24588 427 aa12.61□□□□□ -0.39
SF3B2-208ENST00000529994 QARSP47897 775 aaKnown RBP12.61□□□□□ -0.39
SF3B2-208ENST00000529994 EVCP57679 992 aa12.61□□□□□ -0.39
SF3B2-208ENST00000529994 MLF2Q15773 248 aaPredicted RBP12.61□□□□□ -0.39
SF3B2-208ENST00000529994 USP41Q3LFD5 358 aa12.61□□□□□ -0.39
SF3B2-208ENST00000529994 SLC44A4Q53GD3 710 aa12.61□□□□□ -0.39
SF3B2-208ENST00000529994 NOTUMQ6P988 496 aa12.61□□□□□ -0.39
SF3B2-208ENST00000529994 TSSK4Q6SA08 328 aa12.61□□□□□ -0.39
SF3B2-208ENST00000529994 FERMT3Q86UX7 667 aa12.61□□□□□ -0.39
SF3B2-208ENST00000529994 CNNM3Q8NE01 707 aa12.61□□□□□ -0.39
SF3B2-208ENST00000529994 HASPINQ8TF76 798 aa12.61□□□□□ -0.39
SF3B2-208ENST00000529994 ATRIPQ8WXE1 791 aa12.61□□□□□ -0.39
SF3B2-208ENST00000529994 ZNF274Q96GC6 653 aaPredicted RBP12.61□□□□□ -0.39
SF3B2-208ENST00000529994 KXD1Q9BQD3 176 aa12.61□□□□□ -0.39
SF3B2-208ENST00000529994 DHX33Q9H6R0 707 aaKnown RBP12.61□□□□□ -0.39
SF3B2-208ENST00000529994 KLK14Q9P0G3 267 aa12.61□□□□□ -0.39
SF3B2-208ENST00000529994 DDX25Q9UHL0 483 aaKnown RBP12.61□□□□□ -0.39
SF3B2-208ENST00000529994 ADAM28Q9UKQ2 775 aa12.61□□□□□ -0.39
SF3B2-208ENST00000529994 CDH7Q9ULB5 785 aa12.61□□□□□ -0.39
SF3B2-208ENST00000529994 TPCN1Q9ULQ1 816 aa12.61□□□□□ -0.39
SF3B2-208ENST00000529994 CYP3A7-CYP3A51PA0A087WV96 503 aa12.6□□□□□ -0.39
SF3B2-208ENST00000529994 INO80B-WBP1J3KQ70 363 aa12.6□□□□□ -0.39
SF3B2-208ENST00000529994 ZBTB39O15060 712 aa12.6□□□□□ -0.39
SF3B2-208ENST00000529994 CCL16O15467 120 aa12.6□□□□□ -0.39
SF3B2-208ENST00000529994 DEXIO95424 95 aa12.6□□□□□ -0.39
SF3B2-208ENST00000529994 PAPLNO95428 1278 aa12.6□□□□□ -0.39
SF3B2-208ENST00000529994 SEC24BO95487 1268 aa12.6□□□□□ -0.39
SF3B2-208ENST00000529994 CYP3A7P24462 503 aa12.6□□□□□ -0.39
SF3B2-208ENST00000529994 SCRN1Q12765 414 aa12.6□□□□□ -0.39
SF3B2-208ENST00000529994 EMC2Q15006 297 aa12.6□□□□□ -0.39
SF3B2-208ENST00000529994 ZNF528Q3MIS6 628 aa12.6□□□□□ -0.39
SF3B2-208ENST00000529994 CDR2LQ86X02 465 aaPredicted RBP12.6□□□□□ -0.39
SF3B2-208ENST00000529994 ITFG1Q8TB96 612 aa12.6□□□□□ -0.39
SF3B2-208ENST00000529994 FGF13Q92913 245 aa12.6□□□□□ -0.39
SF3B2-208ENST00000529994 PAAF1Q9BRP4 392 aa12.6□□□□□ -0.39
SF3B2-208ENST00000529994 DDX23Q9BUQ8 820 aaKnown RBP12.6□□□□□ -0.39
SF3B2-208ENST00000529994 CSRNP2Q9H175 543 aa12.6□□□□□ -0.39
SF3B2-208ENST00000529994 NXF3Q9H4D5 531 aaKnown RBP12.6□□□□□ -0.39
SF3B2-208ENST00000529994 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.6□□□□□ -0.39
SF3B2-208ENST00000529994 FNIP2Q9P278 1114 aa12.6□□□□□ -0.39
SF3B2-208ENST00000529994 FBXO4Q9UKT5 387 aa12.6□□□□□ -0.39
SF3B2-208ENST00000529994 CDV3Q9UKY7 258 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms