RNA–Protein interactions for RNA: ENST00000529312.5

CCDC90B-212, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 5

Gene CCDC90B, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-212ENST00000529312 ACKR2O00590 384 aa8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 N4BP3O15049 544 aa8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 USO1O60763 962 aaKnown RBP8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 MED24O75448 989 aa8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 TADA2AO75478 443 aa8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 DDHD2O94830 711 aa8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 GLP2RO95838 553 aa8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 POMCP01189 267 aa8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 ARF4P18085 180 aaPredicted RBP8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 PBX3P40426 434 aa8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 PRPHP41219 470 aa8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 NAMPTP43490 491 aa8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 OR1G1P47890 313 aa8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 SLC11A1P49279 550 aa8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 MBTD1Q05BQ5 628 aa8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 PTGDRQ13258 359 aa8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 PRPF4BQ13523 1007 aaKnown RBP8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 CAPSQ13938 189 aa8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 MCTP1Q6DN14 999 aa8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 LLGL2Q6P1M3 1020 aa8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 SYCE2Q6PIF2 218 aa8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 MAEAQ7L5Y9 396 aa8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 BMP8AQ7Z5Y6 402 aa8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 CABP7Q86V35 215 aa8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 ZNF280BQ86YH2 543 aa8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 EFCAB3Q8N7B9 438 aa8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 C4orf32Q8N8J7 132 aa8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 SMG8Q8ND04 991 aaKnown RBP8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 ASAP3Q8TDY4 903 aa8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 HDAC7Q8WUI4 952 aa8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 KLHL5Q96PQ7 755 aa8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 GAD1Q99259 594 aa8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 KIF2CQ99661 725 aa8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 PRRX2Q99811 253 aa8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 ZBP1Q9H171 429 aa8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 C17orf75Q9HAS0 396 aa8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 KIAA1024Q9UPX6 916 aa8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 RBM19Q9Y4C8 960 aaKnown RBP8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 PCDHGC5Q9Y5F6 944 aa8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 HCFC2Q9Y5Z7 792 aa8.65□□□□□ -1.02
CCDC90B-212ENST00000529312 TRANK1O15050 2925 aa8.65□□□□□ -1.03
CCDC90B-212ENST00000529312 CDH23Q9H251 3354 aa8.65□□□□□ -1.03
CCDC90B-212ENST00000529312 ZMYM2Q9UBW7 1377 aa8.64□□□□□ -1.03
CCDC90B-212ENST00000529312 SLC26A4O43511 780 aa8.64□□□□□ -1.03
CCDC90B-212ENST00000529312 SOD2P04179 222 aa8.64□□□□□ -1.03
CCDC90B-212ENST00000529312 URODP06132 367 aa8.64□□□□□ -1.03
CCDC90B-212ENST00000529312 ADH1AP07327 375 aa8.64□□□□□ -1.03
CCDC90B-212ENST00000529312 SMTNP53814 917 aa8.64□□□□□ -1.03
CCDC90B-212ENST00000529312 CREMQ03060 361 aa8.64□□□□□ -1.03
CCDC90B-212ENST00000529312 ST3GAL1Q11201 340 aa8.64□□□□□ -1.03
CCDC90B-212ENST00000529312 ELAVL2Q12926 359 aaKnown RBP8.64□□□□□ -1.03
CCDC90B-212ENST00000529312 USP41Q3LFD5 358 aa8.64□□□□□ -1.03
CCDC90B-212ENST00000529312 C8orf34Q49A92 452 aa8.64□□□□□ -1.03
CCDC90B-212ENST00000529312 ZBTB33Q86T24 672 aa8.64□□□□□ -1.03
CCDC90B-212ENST00000529312 COLGALT2Q8IYK4 626 aa8.64□□□□□ -1.03
CCDC90B-212ENST00000529312 SLC22A17Q8WUG5 538 aa8.64□□□□□ -1.03
CCDC90B-212ENST00000529312 KHSRPQ92945 711 aaKnown RBP eCLIP8.64□□□□□ -1.03
CCDC90B-212ENST00000529312 ACSF2Q96CM8 615 aaPredicted RBP8.64□□□□□ -1.03
CCDC90B-212ENST00000529312 CPB2Q96IY4 423 aa8.64□□□□□ -1.03
CCDC90B-212ENST00000529312 RPS6KC1Q96S38 1066 aa8.64□□□□□ -1.03
CCDC90B-212ENST00000529312 TIPINQ9BVW5 301 aa8.64□□□□□ -1.03
CCDC90B-212ENST00000529312 APOL6Q9BWW8 343 aa8.64□□□□□ -1.03
CCDC90B-212ENST00000529312 EIF2AQ9BY44 585 aaKnown RBP8.64□□□□□ -1.03
CCDC90B-212ENST00000529312 DNAJB4Q9UDY4 337 aa8.64□□□□□ -1.03
CCDC90B-212ENST00000529312 SMC3Q9UQE7 1217 aa8.64□□□□□ -1.03
CCDC90B-212ENST00000529312 USTQ9Y2C2 406 aa8.64□□□□□ -1.03
CCDC90B-212ENST00000529312 COL4A4P53420 1690 aaPredicted RBP8.64□□□□□ -1.03
CCDC90B-212ENST00000529312 MEIS3P2A8K0S8 358 aa8.63□□□□□ -1.03
CCDC90B-212ENST00000529312 LILRB3O75022 631 aa8.63□□□□□ -1.03
CCDC90B-212ENST00000529312 NPTXRO95502 500 aa8.63□□□□□ -1.03
CCDC90B-212ENST00000529312 BMP15O95972 392 aa8.63□□□□□ -1.03
CCDC90B-212ENST00000529312 THP07101 528 aa8.63□□□□□ -1.03
CCDC90B-212ENST00000529312 VASPP50552 380 aaPredicted RBP8.63□□□□□ -1.03
CCDC90B-212ENST00000529312 ZXDAP98168 799 aa8.63□□□□□ -1.03
CCDC90B-212ENST00000529312 DSC1Q08554 894 aa8.63□□□□□ -1.03
CCDC90B-212ENST00000529312 GRIK3Q13003 919 aa8.63□□□□□ -1.03
CCDC90B-212ENST00000529312 AMHR2Q16671 573 aa8.63□□□□□ -1.03
CCDC90B-212ENST00000529312 DCAF4L1Q3SXM0 396 aa8.63□□□□□ -1.03
CCDC90B-212ENST00000529312 LARP1BQ659C4 914 aaKnown RBP8.63□□□□□ -1.03
CCDC90B-212ENST00000529312 ARL6IP4Q66PJ3 421 aaKnown RBP8.63□□□□□ -1.03
CCDC90B-212ENST00000529312 CDCA2Q69YH5 1023 aaPredicted RBP8.63□□□□□ -1.03
CCDC90B-212ENST00000529312 PDXDC1Q6P996 788 aa8.63□□□□□ -1.03
CCDC90B-212ENST00000529312 TRIM67Q6ZTA4 783 aa8.63□□□□□ -1.03
CCDC90B-212ENST00000529312 OTOP3Q7RTS5 596 aa8.63□□□□□ -1.03
CCDC90B-212ENST00000529312 UBALD2Q8IYN6 164 aa8.63□□□□□ -1.03
CCDC90B-212ENST00000529312 IGSF22Q8N9C0 903 aa8.63□□□□□ -1.03
CCDC90B-212ENST00000529312 VN1R2Q8NFZ6 395 aa8.63□□□□□ -1.03
CCDC90B-212ENST00000529312 SNX29Q8TEQ0 813 aa8.63□□□□□ -1.03
CCDC90B-212ENST00000529312 PBXIP1Q96AQ6 731 aa8.63□□□□□ -1.03
CCDC90B-212ENST00000529312 TMX3Q96JJ7 454 aa8.63□□□□□ -1.03
CCDC90B-212ENST00000529312 DRC1Q96MC2 740 aa8.63□□□□□ -1.03
CCDC90B-212ENST00000529312 FBXL18Q96ME1 805 aa8.63□□□□□ -1.03
CCDC90B-212ENST00000529312 NT5C3AQ9H0P0 336 aa8.63□□□□□ -1.03
CCDC90B-212ENST00000529312 IRF2BPLQ9H1B7 796 aa8.63□□□□□ -1.03
CCDC90B-212ENST00000529312 BHMT2Q9H2M3 363 aa8.63□□□□□ -1.03
CCDC90B-212ENST00000529312 PLEKHA4Q9H4M7 779 aa8.63□□□□□ -1.03
CCDC90B-212ENST00000529312 TMEM134Q9H6X4 195 aa8.63□□□□□ -1.03
CCDC90B-212ENST00000529312 RXFP1Q9HBX9 757 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms