RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 TTC27Q6P3X3 843 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 KCNV1Q6PIU1 500 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 PIGWQ7Z7B1 504 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 FAM83AQ86UY5 434 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 RDH13Q8NBN7 331 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 RDM1Q8NG50 284 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 FBXO25Q8TCJ0 367 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 HELQQ8TDG4 1101 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 EPS8L1Q8TE68 723 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 SPIRE2Q8WWL2 714 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 PSPC1Q8WXF1 523 aaKnown RBP9.01□□□□□ -0.97
CSTF3-208ENST00000528865 SEMA4DQ92854 862 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 KCNN1Q92952 543 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 FAM81BQ96LP2 452 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 ZNF317Q96PQ6 595 aaPredicted RBP9.01□□□□□ -0.97
CSTF3-208ENST00000528865 SENP7Q9BQF6 1050 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 ADAM7Q9H2U9 754 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 KDM4CQ9H3R0 1056 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 CENPHQ9H3R5 247 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 PCIF1Q9H4Z3 704 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 LRRC4CQ9HCJ2 640 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 TMEM8AQ9HCN3 771 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 TMOD4Q9NZQ9 345 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 COL20A1Q9P218 1284 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 BCCIPQ9P287 314 aaKnown RBP eCLIP9.01□□□□□ -0.97
CSTF3-208ENST00000528865 MTRF1LQ9UGC7 380 aaKnown RBP9.01□□□□□ -0.97
CSTF3-208ENST00000528865 GTF3C4Q9UKN8 822 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 MTUS1Q9ULD2 1270 aa9.01□□□□□ -0.97
CSTF3-208ENST00000528865 DCDC2CA8MYV0 355 aa9□□□□□ -0.97
CSTF3-208ENST00000528865 TCP10L2B9ZVM9 353 aa9□□□□□ -0.97
CSTF3-208ENST00000528865 ASAP2O43150 1006 aa9□□□□□ -0.97
CSTF3-208ENST00000528865 SHBGP04278 402 aa9□□□□□ -0.97
CSTF3-208ENST00000528865 ADRB2P07550 413 aa9□□□□□ -0.97
CSTF3-208ENST00000528865 RARAP10276 462 aa9□□□□□ -0.97
CSTF3-208ENST00000528865 CYP11B1P15538 503 aa9□□□□□ -0.97
CSTF3-208ENST00000528865 YWHABP31946 246 aaKnown RBP9□□□□□ -0.97
CSTF3-208ENST00000528865 MARCKSL1P49006 195 aa9□□□□□ -0.97
CSTF3-208ENST00000528865 MXI1P50539 228 aa9□□□□□ -0.97
CSTF3-208ENST00000528865 RWDD2BP57060 319 aa9□□□□□ -0.97
CSTF3-208ENST00000528865 PSMC5P62195 406 aa9□□□□□ -0.97
CSTF3-208ENST00000528865 MRPS9P82933 396 aaKnown RBP9□□□□□ -0.97
CSTF3-208ENST00000528865 CDR2Q01850 454 aa9□□□□□ -0.97
CSTF3-208ENST00000528865 IFFO1Q0D2I5 559 aa9□□□□□ -0.97
CSTF3-208ENST00000528865 QPCTQ16769 361 aa9□□□□□ -0.97
CSTF3-208ENST00000528865 ODF2Q5BJF6 829 aa9□□□□□ -0.97
CSTF3-208ENST00000528865 FBXW10Q5XX13 1052 aa9□□□□□ -0.97
CSTF3-208ENST00000528865 DENND2CQ68D51 928 aa9□□□□□ -0.97
CSTF3-208ENST00000528865 KRT39Q6A163 491 aa9□□□□□ -0.97
CSTF3-208ENST00000528865 MFSD5Q6N075 450 aa9□□□□□ -0.97
CSTF3-208ENST00000528865 AADACL2Q6P093 401 aa9□□□□□ -0.97
CSTF3-208ENST00000528865 RHBDF2Q6PJF5 856 aa9□□□□□ -0.97
CSTF3-208ENST00000528865 CCDC137Q6PK04 289 aaKnown RBP9□□□□□ -0.97
CSTF3-208ENST00000528865 CCDC121Q6ZUS5 278 aa9□□□□□ -0.97
CSTF3-208ENST00000528865 SYDE1Q6ZW31 735 aaPredicted RBP9□□□□□ -0.97
CSTF3-208ENST00000528865 TRMT10CQ7L0Y3 403 aaKnown RBP9□□□□□ -0.97
CSTF3-208ENST00000528865 ENOSF1Q7L5Y1 443 aa9□□□□□ -0.97
CSTF3-208ENST00000528865 CACNA2D3Q8IZS8 1091 aa9□□□□□ -0.97
CSTF3-208ENST00000528865 SYTL5Q8TDW5 730 aaPredicted RBP9□□□□□ -0.97
CSTF3-208ENST00000528865 ATXN2LQ8WWM7 1075 aaKnown RBP9□□□□□ -0.97
CSTF3-208ENST00000528865 DDX1Q92499 740 aaKnown RBP9□□□□□ -0.97
CSTF3-208ENST00000528865 KAT5Q92993 513 aa9□□□□□ -0.97
CSTF3-208ENST00000528865 C18orf8Q96DM3 657 aa9□□□□□ -0.97
CSTF3-208ENST00000528865 CHMP6Q96FZ7 201 aa9□□□□□ -0.97
CSTF3-208ENST00000528865 ZBED3Q96IU2 234 aaPredicted RBP9□□□□□ -0.97
CSTF3-208ENST00000528865 CABS1Q96KC9 395 aa9□□□□□ -0.97
CSTF3-208ENST00000528865 OSBPL7Q9BZF2 842 aa9□□□□□ -0.97
CSTF3-208ENST00000528865 TRIM31Q9BZY9 425 aa9□□□□□ -0.97
CSTF3-208ENST00000528865 C17orf75Q9HAS0 396 aa9□□□□□ -0.97
CSTF3-208ENST00000528865 AVENQ9NQS1 362 aaPredicted RBP9□□□□□ -0.97
CSTF3-208ENST00000528865 GINM1Q9NU53 330 aa9□□□□□ -0.97
CSTF3-208ENST00000528865 SEPT11Q9NVA2 429 aaKnown RBP9□□□□□ -0.97
CSTF3-208ENST00000528865 WHRNQ9P202 907 aa9□□□□□ -0.97
CSTF3-208ENST00000528865 PNMA2Q9UL42 364 aa9□□□□□ -0.97
CSTF3-208ENST00000528865 TBX20Q9UMR3 447 aa9□□□□□ -0.97
CSTF3-208ENST00000528865 ASTN2O75129 1339 aaPredicted RBP9□□□□□ -0.97
CSTF3-208ENST00000528865 TISP43B9A030 160 aa8.99□□□□□ -0.97
CSTF3-208ENST00000528865 ANKRD63C9JTQ0 380 aa8.99□□□□□ -0.97
CSTF3-208ENST00000528865 CYP26A1O43174 497 aa8.99□□□□□ -0.97
CSTF3-208ENST00000528865 PPIP5K2O43314 1243 aa8.99□□□□□ -0.97
CSTF3-208ENST00000528865 RIPK2O43353 540 aa8.99□□□□□ -0.97
CSTF3-208ENST00000528865 ZC3H11AO75152 810 aaKnown RBP eCLIP8.99□□□□□ -0.97
CSTF3-208ENST00000528865 TCEA3O75764 348 aa8.99□□□□□ -0.97
CSTF3-208ENST00000528865 STBD1O95210 358 aa8.99□□□□□ -0.97
CSTF3-208ENST00000528865 ADSSP30520 456 aa8.99□□□□□ -0.97
CSTF3-208ENST00000528865 COPB2P35606 906 aa8.99□□□□□ -0.97
CSTF3-208ENST00000528865 JAK3P52333 1124 aa8.99□□□□□ -0.97
CSTF3-208ENST00000528865 PTP4A2Q12974 167 aa8.99□□□□□ -0.97
CSTF3-208ENST00000528865 SPP2Q13103 211 aa8.99□□□□□ -0.97
CSTF3-208ENST00000528865 AUHQ13825 339 aaKnown RBP8.99□□□□□ -0.97
CSTF3-208ENST00000528865 SLC29A2Q14542 456 aa8.99□□□□□ -0.97
CSTF3-208ENST00000528865 ITIH4Q14624 930 aa8.99□□□□□ -0.97
CSTF3-208ENST00000528865 MESDQ14696 234 aa8.99□□□□□ -0.97
CSTF3-208ENST00000528865 DLGAP5Q15398 846 aa8.99□□□□□ -0.97
CSTF3-208ENST00000528865 ANKRD20A8PQ5CZ79 823 aa8.99□□□□□ -0.97
CSTF3-208ENST00000528865 RNF187Q5TA31 235 aaPredicted RBP8.99□□□□□ -0.97
CSTF3-208ENST00000528865 GKAP1Q5VSY0 366 aaPredicted RBP8.99□□□□□ -0.97
CSTF3-208ENST00000528865 XRRA1Q6P2D8 792 aa8.99□□□□□ -0.97
CSTF3-208ENST00000528865 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.99□□□□□ -0.97
CSTF3-208ENST00000528865 MAP4K3Q8IVH8 894 aa8.99□□□□□ -0.97
CSTF3-208ENST00000528865 TMEM161BQ8NDZ6 487 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 190.4 ms