RNA–Protein interactions for RNA: ENST00000528669.5

TM9SF1-206, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 5 BASIC

Gene TM9SF1, Length 2,425 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-206ENST00000528669 ZNF564Q8TBZ8 553 aaPredicted RBP20.27■□□□□ 0.84
TM9SF1-206ENST00000528669 RPS6KC1Q96S38 1066 aa20.27■□□□□ 0.84
TM9SF1-206ENST00000528669 ZNF341Q9BYN7 854 aa20.27■□□□□ 0.84
TM9SF1-206ENST00000528669 SEMA4AQ9H3S1 761 aa20.27■□□□□ 0.84
TM9SF1-206ENST00000528669 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.27■□□□□ 0.84
TM9SF1-206ENST00000528669 SPOPO43791 374 aa20.27■□□□□ 0.84
TM9SF1-206ENST00000528669 ADSSP30520 456 aa20.27■□□□□ 0.84
TM9SF1-206ENST00000528669 CLUL1Q15846 466 aa20.27■□□□□ 0.84
TM9SF1-206ENST00000528669 SPDYE2Q495Y8 402 aa20.27■□□□□ 0.84
TM9SF1-206ENST00000528669 HOOK3Q86VS8 718 aa20.27■□□□□ 0.84
TM9SF1-206ENST00000528669 CNPY4Q8N129 248 aa20.27■□□□□ 0.84
TM9SF1-206ENST00000528669 ZNF653Q96CK0 615 aa20.27■□□□□ 0.84
TM9SF1-206ENST00000528669 TOPORSQ9NS56 1045 aaPredicted RBP20.27■□□□□ 0.84
TM9SF1-206ENST00000528669 UBIAD1Q9Y5Z9 338 aa20.27■□□□□ 0.84
TM9SF1-206ENST00000528669 ASTN2O75129 1339 aaPredicted RBP20.27■□□□□ 0.84
TM9SF1-206ENST00000528669 CCDC169A6NNP5 214 aa20.26■□□□□ 0.83
TM9SF1-206ENST00000528669 CALCAP01258 141 aa20.26■□□□□ 0.83
TM9SF1-206ENST00000528669 PAEPP09466 180 aa20.26■□□□□ 0.83
TM9SF1-206ENST00000528669 NUDT17P0C025 328 aa20.26■□□□□ 0.83
TM9SF1-206ENST00000528669 FGFR4P22455 802 aa20.26■□□□□ 0.83
TM9SF1-206ENST00000528669 DRG2P55039 364 aaKnown RBP20.26■□□□□ 0.83
TM9SF1-206ENST00000528669 TCEAL1Q15170 157 aa20.26■□□□□ 0.83
TM9SF1-206ENST00000528669 SNRNP35Q16560 246 aaKnown RBP20.26■□□□□ 0.83
TM9SF1-206ENST00000528669 SPDYCQ5MJ68 293 aa20.26■□□□□ 0.83
TM9SF1-206ENST00000528669 OGFOD1Q8N543 542 aa20.26■□□□□ 0.83
TM9SF1-206ENST00000528669 PRPF38AQ8NAV1 312 aaKnown RBP20.26■□□□□ 0.83
TM9SF1-206ENST00000528669 CD101Q93033 1021 aa20.26■□□□□ 0.83
TM9SF1-206ENST00000528669 VTI1AQ96AJ9 217 aa20.26■□□□□ 0.83
TM9SF1-206ENST00000528669 SEC16BQ96JE7 1060 aa20.26■□□□□ 0.83
TM9SF1-206ENST00000528669 AZI2Q9H6S1 392 aa20.26■□□□□ 0.83
TM9SF1-206ENST00000528669 RAVER2Q9HCJ3 691 aaKnown RBP20.26■□□□□ 0.83
TM9SF1-206ENST00000528669 PCYOX1Q9UHG3 505 aa20.26■□□□□ 0.83
TM9SF1-206ENST00000528669 PLSCR1O15162 318 aa20.26■□□□□ 0.83
TM9SF1-206ENST00000528669 ATP9AO75110 1047 aa20.26■□□□□ 0.83
TM9SF1-206ENST00000528669 MYCLP12524 364 aaPredicted RBP20.26■□□□□ 0.83
TM9SF1-206ENST00000528669 HSPA6P17066 643 aa20.26■□□□□ 0.83
TM9SF1-206ENST00000528669 HMGB2P26583 209 aaKnown RBP20.26■□□□□ 0.83
TM9SF1-206ENST00000528669 CCDC105Q8IYK2 499 aa20.26■□□□□ 0.83
TM9SF1-206ENST00000528669 DHX38Q92620 1227 aaKnown RBP20.26■□□□□ 0.83
TM9SF1-206ENST00000528669 TAAR1Q96RJ0 339 aa20.26■□□□□ 0.83
TM9SF1-206ENST00000528669 SELENOSQ9BQE4 189 aa20.26■□□□□ 0.83
TM9SF1-206ENST00000528669 WNT8AQ9H1J5 351 aa20.26■□□□□ 0.83
TM9SF1-206ENST00000528669 DEFB129Q9H1M3 183 aa20.26■□□□□ 0.83
TM9SF1-206ENST00000528669 ZNFX1Q9P2E3 1918 aaKnown RBP20.25■□□□□ 0.83
TM9SF1-206ENST00000528669 XKR9Q5GH70 373 aa20.25■□□□□ 0.83
TM9SF1-206ENST00000528669 SUPT20HQ8NEM7 779 aa20.25■□□□□ 0.83
TM9SF1-206ENST00000528669 PCDHA3Q9Y5H8 950 aa20.25■□□□□ 0.83
TM9SF1-206ENST00000528669 RARAP10276 462 aa20.25■□□□□ 0.83
TM9SF1-206ENST00000528669 GZMAP12544 262 aa20.25■□□□□ 0.83
TM9SF1-206ENST00000528669 CYP11B1P15538 503 aa20.25■□□□□ 0.83
TM9SF1-206ENST00000528669 MFAP3P55082 362 aa20.25■□□□□ 0.83
TM9SF1-206ENST00000528669 NCKAP1LP55160 1127 aa20.25■□□□□ 0.83
TM9SF1-206ENST00000528669 IFI35P80217 286 aaPredicted RBP20.25■□□□□ 0.83
TM9SF1-206ENST00000528669 BYSLQ13895 437 aaKnown RBP20.25■□□□□ 0.83
TM9SF1-206ENST00000528669 SPRED3Q2MJR0 410 aa20.25■□□□□ 0.83
TM9SF1-206ENST00000528669 PCNX4Q63HM2 1172 aa20.25■□□□□ 0.83
TM9SF1-206ENST00000528669 SLC13A5Q86YT5 568 aaPredicted RBP20.25■□□□□ 0.83
TM9SF1-206ENST00000528669 SYTL5Q8TDW5 730 aaPredicted RBP20.25■□□□□ 0.83
TM9SF1-206ENST00000528669 SHC3Q92529 594 aa20.25■□□□□ 0.83
TM9SF1-206ENST00000528669 CABS1Q96KC9 395 aa20.25■□□□□ 0.83
TM9SF1-206ENST00000528669 FAM84AQ96KN4 292 aa20.25■□□□□ 0.83
TM9SF1-206ENST00000528669 GGA2Q9UJY4 613 aa20.25■□□□□ 0.83
TM9SF1-206ENST00000528669 PODXLO00592 558 aa20.24■□□□□ 0.83
TM9SF1-206ENST00000528669 CHN1P15882 459 aa20.24■□□□□ 0.83
TM9SF1-206ENST00000528669 COILP38432 576 aaPredicted RBP20.24■□□□□ 0.83
TM9SF1-206ENST00000528669 SLCO1A2P46721 670 aa20.24■□□□□ 0.83
TM9SF1-206ENST00000528669 SF3A3Q12874 501 aaKnown RBP eCLIP20.24■□□□□ 0.83
TM9SF1-206ENST00000528669 CCDC121Q6ZUS5 278 aa20.24■□□□□ 0.83
TM9SF1-206ENST00000528669 CPLX4Q7Z7G2 160 aa20.24■□□□□ 0.83
TM9SF1-206ENST00000528669 TMEM174Q8WUU8 243 aa20.24■□□□□ 0.83
TM9SF1-206ENST00000528669 CTNND1O60716 968 aaKnown RBP20.24■□□□□ 0.83
TM9SF1-206ENST00000528669 MTA2O94776 668 aa20.24■□□□□ 0.83
TM9SF1-206ENST00000528669 SOX10P56693 466 aa20.24■□□□□ 0.83
TM9SF1-206ENST00000528669 ACTN3Q08043 901 aaPredicted RBP20.24■□□□□ 0.83
TM9SF1-206ENST00000528669 NIPA1Q7RTP0 329 aa20.24■□□□□ 0.83
TM9SF1-206ENST00000528669 HELQQ8TDG4 1101 aa20.24■□□□□ 0.83
TM9SF1-206ENST00000528669 TAS1R2Q8TE23 839 aa20.24■□□□□ 0.83
TM9SF1-206ENST00000528669 TATDN2Q93075 761 aa20.24■□□□□ 0.83
TM9SF1-206ENST00000528669 XPO6Q96QU8 1125 aaKnown RBP20.24■□□□□ 0.83
TM9SF1-206ENST00000528669 GMLQ99445 158 aa20.24■□□□□ 0.83
TM9SF1-206ENST00000528669 CNOT10Q9H9A5 744 aaKnown RBP20.24■□□□□ 0.83
TM9SF1-206ENST00000528669 TBX20Q9UMR3 447 aa20.24■□□□□ 0.83
TM9SF1-206ENST00000528669 GGPS1O95749 300 aa20.23■□□□□ 0.83
TM9SF1-206ENST00000528669 CYP1A2P05177 515 aa20.23■□□□□ 0.83
TM9SF1-206ENST00000528669 SIX1Q15475 284 aaPredicted RBP20.23■□□□□ 0.83
TM9SF1-206ENST00000528669 ERMARDQ5T6L9 678 aa20.23■□□□□ 0.83
TM9SF1-206ENST00000528669 KRT39Q6A163 491 aa20.23■□□□□ 0.83
TM9SF1-206ENST00000528669 CCDC13Q8IYE1 715 aa20.23■□□□□ 0.83
TM9SF1-206ENST00000528669 C3orf20Q8ND61 904 aa20.23■□□□□ 0.83
TM9SF1-206ENST00000528669 EPS8L3Q8TE67 593 aaKnown RBP20.23■□□□□ 0.83
TM9SF1-206ENST00000528669 PARD3BQ8TEW8 1205 aa20.23■□□□□ 0.83
TM9SF1-206ENST00000528669 OSBPL7Q9BZF2 842 aa20.23■□□□□ 0.83
TM9SF1-206ENST00000528669 ST6GALNAC4Q9H4F1 302 aa20.23■□□□□ 0.83
TM9SF1-206ENST00000528669 MTRF1LQ9UGC7 380 aaKnown RBP20.23■□□□□ 0.83
TM9SF1-206ENST00000528669 C5orf60A6NFR6 353 aa20.23■□□□□ 0.83
TM9SF1-206ENST00000528669 MAPK13O15264 365 aa20.23■□□□□ 0.83
TM9SF1-206ENST00000528669 RGS16O15492 202 aaPredicted RBP20.23■□□□□ 0.83
TM9SF1-206ENST00000528669 TBC1D12O60347 775 aa20.23■□□□□ 0.83
TM9SF1-206ENST00000528669 LYPLA2O95372 231 aa20.23■□□□□ 0.83
TM9SF1-206ENST00000528669 CCNE2O96020 404 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms