RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 ZNF568Q3ZCX4 644 aa13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 UBXN11Q5T124 520 aa13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 SLFN12LQ6IEE8 588 aa13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 ARMCX5Q6P1M9 558 aa13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 NOTUMQ6P988 496 aa13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 MPZL3Q6UWV2 235 aa13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 LRRC55Q6ZSA7 311 aa13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 DEFB128Q7Z7B8 93 aa13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 DHX40Q8IX18 779 aaKnown RBP13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 AOPEPQ8N6M6 819 aa13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 ENOX1Q8TC92 643 aaKnown RBP13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 POMGNT1Q8WZA1 660 aa13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 EIF2AQ9BY44 585 aaKnown RBP13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 CDT1Q9H211 546 aa13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 CHST12Q9NRB3 414 aa13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 HSPBP1Q9NZL4 362 aa13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 PRKAG2Q9UGJ0 569 aa13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 EYSQ5T1H1 3165 aa13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 TET1Q8NFU7 2136 aa13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 CAVIN2O95810 425 aa13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 HARSP12081 509 aaKnown RBP13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 GARTP22102 1010 aa13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 NR2F2P24468 414 aa13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 RFC2P35250 354 aa13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 ADAM9Q13443 819 aa13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 SPATA1Q5VX52 437 aa13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 SLC27A1Q6PCB7 646 aa13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 RTN4RL1Q86UN2 441 aaPredicted RBP13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 SLC9A9Q8IVB4 645 aa13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 ZC3H3Q8IXZ2 948 aaKnown RBP13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 CSGALNACT2Q8N6G5 542 aa13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 TMEM174Q8WUU8 243 aa13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 LINC01599Q8WXQ3 324 aa13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 MSTO1Q9BUK6 570 aa13.28□□□□□ -0.28
TRAF3IP2-211ENST00000528599 GOLGA8IPA6NC78 632 aa13.27□□□□□ -0.29
TRAF3IP2-211ENST00000528599 GOLGA8JA6NMD2 632 aa13.27□□□□□ -0.29
TRAF3IP2-211ENST00000528599 FAM189A1O60320 539 aa13.27□□□□□ -0.29
TRAF3IP2-211ENST00000528599 NPTXRO95502 500 aa13.27□□□□□ -0.29
TRAF3IP2-211ENST00000528599 MCF2P10911 925 aa13.27□□□□□ -0.29
TRAF3IP2-211ENST00000528599 MATR3P43243 847 aaKnown RBP eCLIP13.27□□□□□ -0.29
TRAF3IP2-211ENST00000528599 CASP4P49662 377 aa13.27□□□□□ -0.29
TRAF3IP2-211ENST00000528599 FKBP3Q00688 224 aaKnown RBP13.27□□□□□ -0.29
TRAF3IP2-211ENST00000528599 MYL5Q02045 173 aa13.27□□□□□ -0.29
TRAF3IP2-211ENST00000528599 MYBPC2Q14324 1141 aa13.27□□□□□ -0.29
TRAF3IP2-211ENST00000528599 NOLC1Q14978 699 aaKnown RBP eCLIP13.27□□□□□ -0.29
TRAF3IP2-211ENST00000528599 SEZ6Q53EL9 994 aa13.27□□□□□ -0.29
TRAF3IP2-211ENST00000528599 ZBTB41Q5SVQ8 909 aa13.27□□□□□ -0.29
TRAF3IP2-211ENST00000528599 TWF2Q6IBS0 349 aaKnown RBP13.27□□□□□ -0.29
TRAF3IP2-211ENST00000528599 C16orf59Q7L2K0 433 aa13.27□□□□□ -0.29
TRAF3IP2-211ENST00000528599 LUZP1Q86V48 1076 aa13.27□□□□□ -0.29
TRAF3IP2-211ENST00000528599 TMEM199Q8N511 208 aa13.27□□□□□ -0.29
TRAF3IP2-211ENST00000528599 CEP120Q8N960 986 aa13.27□□□□□ -0.29
TRAF3IP2-211ENST00000528599 FAM200AQ8TCP9 573 aa13.27□□□□□ -0.29
TRAF3IP2-211ENST00000528599 SEPT8Q92599 483 aa13.27□□□□□ -0.29
TRAF3IP2-211ENST00000528599 SAAL1Q96ER3 474 aa13.27□□□□□ -0.29
TRAF3IP2-211ENST00000528599 CCDC51Q96ER9 411 aa13.27□□□□□ -0.29
TRAF3IP2-211ENST00000528599 ADAM2Q99965 735 aa13.27□□□□□ -0.29
TRAF3IP2-211ENST00000528599 SRRTQ9BXP5 876 aaKnown RBP13.27□□□□□ -0.29
TRAF3IP2-211ENST00000528599 AGO2Q9UKV8 859 aaKnown RBP13.27□□□□□ -0.29
TRAF3IP2-211ENST00000528599 NFE2L3Q9Y4A8 694 aa13.27□□□□□ -0.29
TRAF3IP2-211ENST00000528599 IKBKBO14920 756 aa13.26□□□□□ -0.29
TRAF3IP2-211ENST00000528599 ZSCAN20P17040 1043 aaPredicted RBP13.26□□□□□ -0.29
TRAF3IP2-211ENST00000528599 RPL13P26373 211 aaKnown RBP13.26□□□□□ -0.29
TRAF3IP2-211ENST00000528599 CRELD2Q6UXH1 353 aaPredicted RBP13.26□□□□□ -0.29
TRAF3IP2-211ENST00000528599 IRF2BP1Q8IU81 584 aa13.26□□□□□ -0.29
TRAF3IP2-211ENST00000528599 XXYLT1Q8NBI6 393 aa13.26□□□□□ -0.29
TRAF3IP2-211ENST00000528599 RNF214Q8ND24 703 aa13.26□□□□□ -0.29
TRAF3IP2-211ENST00000528599 ADPGKQ9BRR6 497 aa13.26□□□□□ -0.29
TRAF3IP2-211ENST00000528599 RBSNQ9H1K0 784 aa13.26□□□□□ -0.29
TRAF3IP2-211ENST00000528599 HSD3B7Q9H2F3 369 aa13.26□□□□□ -0.29
TRAF3IP2-211ENST00000528599 SAMSN1Q9NSI8 373 aaKnown RBP13.26□□□□□ -0.29
TRAF3IP2-211ENST00000528599 FANCLQ9NW38 375 aa13.26□□□□□ -0.29
TRAF3IP2-211ENST00000528599 CHD9Q3L8U1 2897 aa13.26□□□□□ -0.29
TRAF3IP2-211ENST00000528599 CETN3O15182 167 aa13.25□□□□□ -0.29
TRAF3IP2-211ENST00000528599 OGTO15294 1046 aa13.25□□□□□ -0.29
TRAF3IP2-211ENST00000528599 EXOC3O60645 756 aa13.25□□□□□ -0.29
TRAF3IP2-211ENST00000528599 AKAP3O75969 853 aa13.25□□□□□ -0.29
TRAF3IP2-211ENST00000528599 TNFSF9P41273 254 aa13.25□□□□□ -0.29
TRAF3IP2-211ENST00000528599 ACOT2P49753 483 aa13.25□□□□□ -0.29
TRAF3IP2-211ENST00000528599 TPD52L1Q16890 204 aaPredicted RBP13.25□□□□□ -0.29
TRAF3IP2-211ENST00000528599 DCAF4L1Q3SXM0 396 aa13.25□□□□□ -0.29
TRAF3IP2-211ENST00000528599 HSP90AA4PQ58FG1 418 aa13.25□□□□□ -0.29
TRAF3IP2-211ENST00000528599 C9orf50Q5SZB4 431 aa13.25□□□□□ -0.29
TRAF3IP2-211ENST00000528599 CEP135Q66GS9 1140 aa13.25□□□□□ -0.29
TRAF3IP2-211ENST00000528599 CBWD2Q8IUF1 395 aa13.25□□□□□ -0.29
TRAF3IP2-211ENST00000528599 TMEM192Q8IY95 271 aa13.25□□□□□ -0.29
TRAF3IP2-211ENST00000528599 THNSL1Q8IYQ7 743 aa13.25□□□□□ -0.29
TRAF3IP2-211ENST00000528599 RDH13Q8NBN7 331 aa13.25□□□□□ -0.29
TRAF3IP2-211ENST00000528599 SMG8Q8ND04 991 aaKnown RBP13.25□□□□□ -0.29
TRAF3IP2-211ENST00000528599 NOC3LQ8WTT2 800 aaKnown RBP13.25□□□□□ -0.29
TRAF3IP2-211ENST00000528599 APBB2Q92870 758 aa13.25□□□□□ -0.29
TRAF3IP2-211ENST00000528599 FBXL18Q96ME1 805 aa13.25□□□□□ -0.29
TRAF3IP2-211ENST00000528599 CEP63Q96MT8 703 aa13.25□□□□□ -0.29
TRAF3IP2-211ENST00000528599 FAM213AQ9BRX8 229 aa13.25□□□□□ -0.29
TRAF3IP2-211ENST00000528599 TRAIPQ9BWF2 469 aa13.25□□□□□ -0.29
TRAF3IP2-211ENST00000528599 NXF3Q9H4D5 531 aaKnown RBP13.25□□□□□ -0.29
TRAF3IP2-211ENST00000528599 RGS18Q9NS28 235 aa13.25□□□□□ -0.29
TRAF3IP2-211ENST00000528599 HES2Q9Y543 173 aa13.25□□□□□ -0.29
TRAF3IP2-211ENST00000528599 CHD7Q9P2D1 2997 aa13.25□□□□□ -0.29
TRAF3IP2-211ENST00000528599 SMTNL1A8MU46 457 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms