RNA–Protein interactions for RNA: ENST00000528563.5

HIF3A-211, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2

Gene HIF3A, Length 1,486 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-211ENST00000528563 MLH1P40692 756 aa18.5■□□□□ 0.55
HIF3A-211ENST00000528563 ERVFC1P60507 584 aa18.5■□□□□ 0.55
HIF3A-211ENST00000528563 KRT17Q04695 432 aa18.5■□□□□ 0.55
HIF3A-211ENST00000528563 COL19A1Q14993 1142 aa18.5■□□□□ 0.55
HIF3A-211ENST00000528563 HAUS6Q7Z4H7 955 aa18.5■□□□□ 0.55
HIF3A-211ENST00000528563 MYCT1Q8N699 235 aa18.5■□□□□ 0.55
HIF3A-211ENST00000528563 PDILTQ8N807 584 aa18.5■□□□□ 0.55
HIF3A-211ENST00000528563 ATXN2LQ8WWM7 1075 aaKnown RBP18.5■□□□□ 0.55
HIF3A-211ENST00000528563 HLA-CQ95604 372 aa18.5■□□□□ 0.55
HIF3A-211ENST00000528563 PARVGQ9HBI0 331 aa18.5■□□□□ 0.55
HIF3A-211ENST00000528563 THEGQ9P2T0 379 aa18.5■□□□□ 0.55
HIF3A-211ENST00000528563 PARP2Q9UGN5 583 aa18.5■□□□□ 0.55
HIF3A-211ENST00000528563 PUF60Q9UHX1 559 aaKnown RBP18.5■□□□□ 0.55
HIF3A-211ENST00000528563 COG5Q9UP83 839 aa18.5■□□□□ 0.55
HIF3A-211ENST00000528563 CUL9Q8IWT3 2517 aa18.5■□□□□ 0.55
HIF3A-211ENST00000528563 PLXNA4Q9HCM2 1894 aa18.5■□□□□ 0.55
HIF3A-211ENST00000528563 TTC28Q96AY4 2481 aa18.49■□□□□ 0.55
HIF3A-211ENST00000528563 ZMYM2Q9UBW7 1377 aa18.49■□□□□ 0.55
HIF3A-211ENST00000528563 H0YCG3 227 aa18.49■□□□□ 0.55
HIF3A-211ENST00000528563 ALDH2P05091 517 aa18.49■□□□□ 0.55
HIF3A-211ENST00000528563 SCP2P22307 547 aa18.49■□□□□ 0.55
HIF3A-211ENST00000528563 PROZP22891 400 aa18.49■□□□□ 0.55
HIF3A-211ENST00000528563 STAT6P42226 847 aa18.49■□□□□ 0.55
HIF3A-211ENST00000528563 ME1P48163 572 aa18.49■□□□□ 0.55
HIF3A-211ENST00000528563 SLC11A1P49279 550 aa18.49■□□□□ 0.55
HIF3A-211ENST00000528563 DSC1Q08554 894 aa18.49■□□□□ 0.55
HIF3A-211ENST00000528563 DCAF4L1Q3SXM0 396 aa18.49■□□□□ 0.55
HIF3A-211ENST00000528563 COLGALT2Q8IYK4 626 aa18.49■□□□□ 0.55
HIF3A-211ENST00000528563 DDX12PQ92771 950 aa18.49■□□□□ 0.55
HIF3A-211ENST00000528563 DNAJC19Q96DA6 116 aa18.49■□□□□ 0.55
HIF3A-211ENST00000528563 FIZ1Q96SL8 496 aa18.49■□□□□ 0.55
HIF3A-211ENST00000528563 GBP3Q9H0R5 595 aa18.49■□□□□ 0.55
HIF3A-211ENST00000528563 TLR9Q9NR96 1032 aa18.49■□□□□ 0.55
HIF3A-211ENST00000528563 SNTG2Q9NY99 539 aa18.49■□□□□ 0.55
HIF3A-211ENST00000528563 KLK14Q9P0G3 267 aa18.49■□□□□ 0.55
HIF3A-211ENST00000528563 UNC80Q8N2C7 3258 aa18.48■□□□□ 0.55
HIF3A-211ENST00000528563 ABLIM1O14639 778 aa18.48■□□□□ 0.55
HIF3A-211ENST00000528563 FSCN2O14926 492 aa18.48■□□□□ 0.55
HIF3A-211ENST00000528563 TRAK2O60296 914 aa18.48■□□□□ 0.55
HIF3A-211ENST00000528563 SCNN1GP51170 649 aa18.48■□□□□ 0.55
HIF3A-211ENST00000528563 STRN3Q13033 797 aa18.48■□□□□ 0.55
HIF3A-211ENST00000528563 E2F4Q16254 413 aa18.48■□□□□ 0.55
HIF3A-211ENST00000528563 PDE12Q6L8Q7 609 aaKnown RBP18.48■□□□□ 0.55
HIF3A-211ENST00000528563 DYMQ7RTS9 669 aa18.48■□□□□ 0.55
HIF3A-211ENST00000528563 APBB1IPQ7Z5R6 666 aaPredicted RBP18.48■□□□□ 0.55
HIF3A-211ENST00000528563 TMEM173Q86WV6 379 aaPredicted RBP18.48■□□□□ 0.55
HIF3A-211ENST00000528563 IGSF21Q96ID5 467 aa18.48■□□□□ 0.55
HIF3A-211ENST00000528563 CHAMP1Q96JM3 812 aa18.48■□□□□ 0.55
HIF3A-211ENST00000528563 FAM193BQ96PV7 902 aaPredicted RBP18.48■□□□□ 0.55
HIF3A-211ENST00000528563 TMEM175Q9BSA9 504 aa18.48■□□□□ 0.55
HIF3A-211ENST00000528563 NCK2O43639 380 aa18.47■□□□□ 0.55
HIF3A-211ENST00000528563 TBCAO75347 108 aaKnown RBP18.47■□□□□ 0.55
HIF3A-211ENST00000528563 MRPS5P82675 430 aaKnown RBP18.47■□□□□ 0.55
HIF3A-211ENST00000528563 TFF2Q03403 129 aa18.47■□□□□ 0.55
HIF3A-211ENST00000528563 HYAL1Q12794 435 aa18.47■□□□□ 0.55
HIF3A-211ENST00000528563 ZPBP2Q6X784 338 aa18.47■□□□□ 0.55
HIF3A-211ENST00000528563 MICAL1Q8TDZ2 1067 aa18.47■□□□□ 0.55
HIF3A-211ENST00000528563 BCL7CQ8WUZ0 217 aaPredicted RBP18.47■□□□□ 0.55
HIF3A-211ENST00000528563 ZBTB45Q96K62 511 aaPredicted RBP18.47■□□□□ 0.55
HIF3A-211ENST00000528563 CDT1Q9H211 546 aa18.47■□□□□ 0.55
HIF3A-211ENST00000528563 CXCL16Q9H2A7 254 aa18.47■□□□□ 0.55
HIF3A-211ENST00000528563 TBX20Q9UMR3 447 aa18.47■□□□□ 0.55
HIF3A-211ENST00000528563 PCDHGC5Q9Y5F6 944 aa18.47■□□□□ 0.55
HIF3A-211ENST00000528563 ATG2AQ2TAZ0 1938 aa18.47■□□□□ 0.55
HIF3A-211ENST00000528563 TOM1L1O75674 476 aa18.46■□□□□ 0.55
HIF3A-211ENST00000528563 RECQL4O94761 1208 aa18.46■□□□□ 0.55
HIF3A-211ENST00000528563 CSPG5O95196 566 aa18.46■□□□□ 0.55
HIF3A-211ENST00000528563 MCF2P10911 925 aa18.46■□□□□ 0.55
HIF3A-211ENST00000528563 CTC1Q2NKJ3 1217 aa18.46■□□□□ 0.55
HIF3A-211ENST00000528563 RESP18Q5W5W9 173 aa18.46■□□□□ 0.55
HIF3A-211ENST00000528563 ADGRD2Q7Z7M1 963 aa18.46■□□□□ 0.55
HIF3A-211ENST00000528563 DDX53Q86TM3 631 aaKnown RBP18.46■□□□□ 0.55
HIF3A-211ENST00000528563 LEO1Q8WVC0 666 aaPredicted RBP18.46■□□□□ 0.55
HIF3A-211ENST00000528563 TMEM169Q96HH4 297 aa18.46■□□□□ 0.55
HIF3A-211ENST00000528563 ASB2Q96Q27 587 aa18.46■□□□□ 0.55
HIF3A-211ENST00000528563 TCHPQ9BT92 498 aa18.46■□□□□ 0.55
HIF3A-211ENST00000528563 ST6GALNAC4Q9H4F1 302 aa18.46■□□□□ 0.55
HIF3A-211ENST00000528563 ZHX3Q9H4I2 956 aa18.46■□□□□ 0.55
HIF3A-211ENST00000528563 KBTBD4Q9NVX7 518 aa18.46■□□□□ 0.55
HIF3A-211ENST00000528563 FAN1Q9Y2M0 1017 aa18.46■□□□□ 0.55
HIF3A-211ENST00000528563 GDAQ9Y2T3 454 aa18.46■□□□□ 0.55
HIF3A-211ENST00000528563 ATP6V1DQ9Y5K8 247 aa18.46■□□□□ 0.55
HIF3A-211ENST00000528563 PTGESO14684 152 aa18.46■□□□□ 0.54
HIF3A-211ENST00000528563 NRP1O14786 923 aa18.46■□□□□ 0.54
HIF3A-211ENST00000528563 GTF2F1P35269 517 aaKnown RBP eCLIP18.46■□□□□ 0.54
HIF3A-211ENST00000528563 GRM5P41594 1212 aa18.46■□□□□ 0.54
HIF3A-211ENST00000528563 KRT85P78386 507 aa18.46■□□□□ 0.54
HIF3A-211ENST00000528563 GTF2BQ00403 316 aa18.46■□□□□ 0.54
HIF3A-211ENST00000528563 ZNF568Q3ZCX4 644 aa18.46■□□□□ 0.54
HIF3A-211ENST00000528563 MPZL3Q6UWV2 235 aa18.46■□□□□ 0.54
HIF3A-211ENST00000528563 ZNF720Q7Z2F6 126 aa18.46■□□□□ 0.54
HIF3A-211ENST00000528563 ZBTB33Q86T24 672 aa18.46■□□□□ 0.54
HIF3A-211ENST00000528563 FAM178BQ8IXR5 827 aa18.46■□□□□ 0.54
HIF3A-211ENST00000528563 IQUBQ8NA54 791 aa18.46■□□□□ 0.54
HIF3A-211ENST00000528563 PABPC5Q96DU9 382 aaKnown RBP18.46■□□□□ 0.54
HIF3A-211ENST00000528563 CUEDC2Q9H467 287 aa18.46■□□□□ 0.54
HIF3A-211ENST00000528563 UBE2ZQ9H832 354 aaPredicted RBP18.46■□□□□ 0.54
HIF3A-211ENST00000528563 NGRNQ9NPE2 291 aaKnown RBP18.46■□□□□ 0.54
HIF3A-211ENST00000528563 NCOR1O75376 2440 aa18.45■□□□□ 0.54
HIF3A-211ENST00000528563 NMT1P30419 496 aaKnown RBP18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms