RNA–Protein interactions for RNA: ENST00000528402.5

ECHDC1-220, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 1 (best) BASIC

Gene ECHDC1, Length 1,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-220ENST00000528402 SLFN11Q7Z7L1 901 aa15.96■□□□□ 0.15
ECHDC1-220ENST00000528402 RHOT2Q8IXI1 618 aa15.96■□□□□ 0.15
ECHDC1-220ENST00000528402 KRT222Q8N1A0 295 aa15.96■□□□□ 0.15
ECHDC1-220ENST00000528402 ASAP3Q8TDY4 903 aa15.96■□□□□ 0.15
ECHDC1-220ENST00000528402 CTNNBL1Q8WYA6 563 aaPredicted RBP15.96■□□□□ 0.15
ECHDC1-220ENST00000528402 CCDC127Q96BQ5 260 aa15.96■□□□□ 0.15
ECHDC1-220ENST00000528402 FNBP1Q96RU3 617 aa15.96■□□□□ 0.15
ECHDC1-220ENST00000528402 SELENOOQ9BVL4 669 aa15.96■□□□□ 0.15
ECHDC1-220ENST00000528402 VTA1Q9NP79 307 aa15.96■□□□□ 0.15
ECHDC1-220ENST00000528402 AGO2Q9UKV8 859 aaKnown RBP15.96■□□□□ 0.15
ECHDC1-220ENST00000528402 TELO2Q9Y4R8 837 aa15.96■□□□□ 0.15
ECHDC1-220ENST00000528402 NCANO14594 1321 aa15.95■□□□□ 0.14
ECHDC1-220ENST00000528402 IGKV6-21A0A0C4DH24 114 aa15.95■□□□□ 0.14
ECHDC1-220ENST00000528402 SORBS3O60504 671 aa15.95■□□□□ 0.14
ECHDC1-220ENST00000528402 PGK2P07205 417 aa15.95■□□□□ 0.14
ECHDC1-220ENST00000528402 TXNP10599 105 aaKnown RBP15.95■□□□□ 0.14
ECHDC1-220ENST00000528402 GJA5P36382 358 aa15.95■□□□□ 0.14
ECHDC1-220ENST00000528402 GALCP54803 685 aa15.95■□□□□ 0.14
ECHDC1-220ENST00000528402 HADHBP55084 474 aaKnown RBP15.95■□□□□ 0.14
ECHDC1-220ENST00000528402 MAP2K1Q02750 393 aaPredicted RBP15.95■□□□□ 0.14
ECHDC1-220ENST00000528402 GRM1Q13255 1194 aa15.95■□□□□ 0.14
ECHDC1-220ENST00000528402 TFDP1Q14186 410 aa15.95■□□□□ 0.14
ECHDC1-220ENST00000528402 CLUL1Q15846 466 aa15.95■□□□□ 0.14
ECHDC1-220ENST00000528402 WDR44Q5JSH3 913 aa15.95■□□□□ 0.14
ECHDC1-220ENST00000528402 SV2AQ7L0J3 742 aa15.95■□□□□ 0.14
ECHDC1-220ENST00000528402 ZBTB8OSQ8IWT0 167 aa15.95■□□□□ 0.14
ECHDC1-220ENST00000528402 TPCN2Q8NHX9 752 aa15.95■□□□□ 0.14
ECHDC1-220ENST00000528402 LNX1Q8TBB1 728 aaPredicted RBP15.95■□□□□ 0.14
ECHDC1-220ENST00000528402 ZNF526Q8TF50 670 aaPredicted RBP15.95■□□□□ 0.14
ECHDC1-220ENST00000528402 RFFLQ8WZ73 363 aa15.95■□□□□ 0.14
ECHDC1-220ENST00000528402 SHC3Q92529 594 aa15.95■□□□□ 0.14
ECHDC1-220ENST00000528402 CAPZA3Q96KX2 299 aa15.95■□□□□ 0.14
ECHDC1-220ENST00000528402 SPATA33Q96N06 139 aa15.95■□□□□ 0.14
ECHDC1-220ENST00000528402 FAM213AQ9BRX8 229 aa15.95■□□□□ 0.14
ECHDC1-220ENST00000528402 PACSIN1Q9BY11 444 aa15.95■□□□□ 0.14
ECHDC1-220ENST00000528402 ZNF446Q9NWS9 450 aa15.95■□□□□ 0.14
ECHDC1-220ENST00000528402 MORF4L1Q9UBU8 362 aa15.95■□□□□ 0.14
ECHDC1-220ENST00000528402 A0A0B4J269 797 aa15.94■□□□□ 0.14
ECHDC1-220ENST00000528402 RBM47A0AV96 593 aaKnown RBP15.94■□□□□ 0.14
ECHDC1-220ENST00000528402 PEX10O60683 326 aa15.94■□□□□ 0.14
ECHDC1-220ENST00000528402 BPIFB4P59827 614 aa15.94■□□□□ 0.14
ECHDC1-220ENST00000528402 POU5F1BQ06416 359 aa15.94■□□□□ 0.14
ECHDC1-220ENST00000528402 ZNF792Q3KQV3 632 aa15.94■□□□□ 0.14
ECHDC1-220ENST00000528402 WDR78Q5VTH9 848 aa15.94■□□□□ 0.14
ECHDC1-220ENST00000528402 C15orf39Q6ZRI6 1047 aa15.94■□□□□ 0.14
ECHDC1-220ENST00000528402 GPIHBP1Q8IV16 184 aa15.94■□□□□ 0.14
ECHDC1-220ENST00000528402 GLYCTKQ8IVS8 523 aa15.94■□□□□ 0.14
ECHDC1-220ENST00000528402 ARHGEF19Q8IW93 802 aa15.94■□□□□ 0.14
ECHDC1-220ENST00000528402 SPATA4Q8NEY3 305 aa15.94■□□□□ 0.14
ECHDC1-220ENST00000528402 MRPL4Q9BYD3 311 aaKnown RBP15.94■□□□□ 0.14
ECHDC1-220ENST00000528402 ISCUQ9H1K1 167 aa15.94■□□□□ 0.14
ECHDC1-220ENST00000528402 SUCLA2Q9P2R7 463 aaPredicted RBP15.94■□□□□ 0.14
ECHDC1-220ENST00000528402 PDHXO00330 501 aa15.94■□□□□ 0.14
ECHDC1-220ENST00000528402 RTN2O75298 545 aa15.94■□□□□ 0.14
ECHDC1-220ENST00000528402 RHOXF2BP0C7M4 288 aa15.94■□□□□ 0.14
ECHDC1-220ENST00000528402 PNMA6AP0CW24 399 aaPredicted RBP15.94■□□□□ 0.14
ECHDC1-220ENST00000528402 PRPF4BQ13523 1007 aaKnown RBP15.94■□□□□ 0.14
ECHDC1-220ENST00000528402 ZNF484Q5JVG2 852 aa15.94■□□□□ 0.14
ECHDC1-220ENST00000528402 CDCA2Q69YH5 1023 aaPredicted RBP15.94■□□□□ 0.14
ECHDC1-220ENST00000528402 NFRKBQ6P4R8 1299 aa15.94■□□□□ 0.14
ECHDC1-220ENST00000528402 EEPD1Q7L9B9 569 aa15.94■□□□□ 0.14
ECHDC1-220ENST00000528402 HDXQ7Z353 690 aa15.94■□□□□ 0.14
ECHDC1-220ENST00000528402 PPM1KQ8N3J5 372 aa15.94■□□□□ 0.14
ECHDC1-220ENST00000528402 C2orf69Q8N8R5 385 aa15.94■□□□□ 0.14
ECHDC1-220ENST00000528402 LRRC57Q8N9N7 239 aa15.94■□□□□ 0.14
ECHDC1-220ENST00000528402 NOA1Q8NC60 698 aaKnown RBP15.94■□□□□ 0.14
ECHDC1-220ENST00000528402 ZSWIM2Q8NEG5 633 aa15.94■□□□□ 0.14
ECHDC1-220ENST00000528402 HELQQ8TDG4 1101 aa15.94■□□□□ 0.14
ECHDC1-220ENST00000528402 RHOXF2Q9BQY4 288 aa15.94■□□□□ 0.14
ECHDC1-220ENST00000528402 IVNS1ABPQ9Y6Y0 642 aa15.94■□□□□ 0.14
ECHDC1-220ENST00000528402 ZNF185O15231 689 aa15.93■□□□□ 0.14
ECHDC1-220ENST00000528402 MAGEB2O15479 319 aa15.93■□□□□ 0.14
ECHDC1-220ENST00000528402 KIF4AO95239 1232 aa15.93■□□□□ 0.14
ECHDC1-220ENST00000528402 ARIH2O95376 493 aa15.93■□□□□ 0.14
ECHDC1-220ENST00000528402 ZBTB48P10074 688 aaPredicted RBP15.93■□□□□ 0.14
ECHDC1-220ENST00000528402 CAPSQ13938 189 aa15.93■□□□□ 0.14
ECHDC1-220ENST00000528402 PLCB4Q15147 1175 aa15.93■□□□□ 0.14
ECHDC1-220ENST00000528402 ZACNQ401N2 412 aa15.93■□□□□ 0.14
ECHDC1-220ENST00000528402 PPP1R2P3Q6NXS1 205 aa15.93■□□□□ 0.14
ECHDC1-220ENST00000528402 ARMCX2Q7L311 632 aa15.93■□□□□ 0.14
ECHDC1-220ENST00000528402 ZNF677Q86XU0 584 aa15.93■□□□□ 0.14
ECHDC1-220ENST00000528402 OLIG1Q8TAK6 271 aa15.93■□□□□ 0.14
ECHDC1-220ENST00000528402 COG1Q8WTW3 980 aa15.93■□□□□ 0.14
ECHDC1-220ENST00000528402 PRPF31Q8WWY3 499 aaKnown RBP15.93■□□□□ 0.14
ECHDC1-220ENST00000528402 SEMA4DQ92854 862 aa15.93■□□□□ 0.14
ECHDC1-220ENST00000528402 EMID1Q96A84 441 aaPredicted RBP15.93■□□□□ 0.14
ECHDC1-220ENST00000528402 MS4A4AQ96JQ5 239 aa15.93■□□□□ 0.14
ECHDC1-220ENST00000528402 MSTO1Q9BUK6 570 aa15.93■□□□□ 0.14
ECHDC1-220ENST00000528402 EPC1Q9H2F5 836 aa15.93■□□□□ 0.14
ECHDC1-220ENST00000528402 ERAP1Q9NZ08 941 aa15.93■□□□□ 0.14
ECHDC1-220ENST00000528402 AMFRQ9UKV5 643 aa15.93■□□□□ 0.14
ECHDC1-220ENST00000528402 ADGRA2Q96PE1 1338 aa15.92■□□□□ 0.14
ECHDC1-220ENST00000528402 CCL15-CCL14A0A0B4J2E2 113 aa15.92■□□□□ 0.14
ECHDC1-220ENST00000528402 PDE2AO00408 941 aaPredicted RBP15.92■□□□□ 0.14
ECHDC1-220ENST00000528402 CLDN3O15551 220 aa15.92■□□□□ 0.14
ECHDC1-220ENST00000528402 LRRN2O75325 713 aa15.92■□□□□ 0.14
ECHDC1-220ENST00000528402 TOM1L1O75674 476 aa15.92■□□□□ 0.14
ECHDC1-220ENST00000528402 GH1P01241 217 aa15.92■□□□□ 0.14
ECHDC1-220ENST00000528402 C4BPAP04003 597 aaKnown RBP15.92■□□□□ 0.14
ECHDC1-220ENST00000528402 DLATP10515 647 aaKnown RBP15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms