RNA–Protein interactions for RNA: ENST00000528362.1

PSMC3-205, Transcript of proteasome 26S subunit, ATPase 3, human

TSL 2

Gene PSMC3, Length 546 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PSMC3-205	ENST00000528362	C2orf71	A6NGG8	1288 aa		12.95	□□□□□ -0.34
PSMC3-205	ENST00000528362	NRP1	O14786	923 aa		12.95	□□□□□ -0.34
PSMC3-205	ENST00000528362	PLCG1	P19174	1290 aa		12.95	□□□□□ -0.34
PSMC3-205	ENST00000528362	SMAD4	Q13485	552 aa	Known RBP	12.95	□□□□□ -0.34
PSMC3-205	ENST00000528362	KCNC3	Q14003	757 aa		12.95	□□□□□ -0.34
PSMC3-205	ENST00000528362	SMC1A	Q14683	1233 aa	Known RBP	12.95	□□□□□ -0.34
PSMC3-205	ENST00000528362	ARSH	Q5FYA8	562 aa		12.95	□□□□□ -0.34
PSMC3-205	ENST00000528362	ATF7IP2	Q5U623	682 aa		12.95	□□□□□ -0.34
PSMC3-205	ENST00000528362	USP49	Q70CQ1	688 aa		12.95	□□□□□ -0.34
PSMC3-205	ENST00000528362	AUTS2	Q8WXX7	1259 aa		12.95	□□□□□ -0.34
PSMC3-205	ENST00000528362	CALML4	Q96GE6	196 aa		12.95	□□□□□ -0.34
PSMC3-205	ENST00000528362	FAM193B	Q96PV7	902 aa	Predicted RBP	12.95	□□□□□ -0.34
PSMC3-205	ENST00000528362	USP28	Q96RU2	1077 aa		12.95	□□□□□ -0.34
PSMC3-205	ENST00000528362	C17orf75	Q9HAS0	396 aa		12.95	□□□□□ -0.34
PSMC3-205	ENST00000528362	BLOC1S4	Q9NUP1	217 aa		12.95	□□□□□ -0.34
PSMC3-205	ENST00000528362	MARCH5	Q9NX47	278 aa		12.95	□□□□□ -0.34
PSMC3-205	ENST00000528362	KCND2	Q9NZV8	630 aa		12.95	□□□□□ -0.34
PSMC3-205	ENST00000528362	KLK14	Q9P0G3	267 aa		12.95	□□□□□ -0.34
PSMC3-205	ENST00000528362	PARP2	Q9UGN5	583 aa		12.95	□□□□□ -0.34
PSMC3-205	ENST00000528362	CD207	Q9UJ71	328 aa		12.95	□□□□□ -0.34
PSMC3-205	ENST00000528362	PRG3	Q9Y2Y8	225 aa	Predicted RBP	12.95	□□□□□ -0.34
PSMC3-205	ENST00000528362	FSD2	A1L4K1	749 aa		12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362		F8W810	466 aa		12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362		K7ERI5	159 aa		12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362	SLC16A4	O15374	487 aa		12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362	MBTPS2	O43462	519 aa		12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362	RECQL4	O94761	1208 aa		12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362	ALDH2	P05091	517 aa		12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362	CTSA	P10619	480 aa		12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362	PLS3	P13797	630 aa		12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362	CACNB1	Q02641	598 aa	Predicted RBP	12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362	CEBPZ	Q03701	1054 aa	Known RBP	12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362	GRIK3	Q13003	919 aa		12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362	COASY	Q13057	564 aa		12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362	DCAF4L1	Q3SXM0	396 aa		12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362	SPECC1	Q5M775	1068 aa		12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362	GPBP1	Q86WP2	473 aa		12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362	FAM178B	Q8IXR5	827 aa		12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362	SMRP1	Q8NCR6	262 aa		12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362	TMEM161B	Q8NDZ6	487 aa		12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362	SPIRE2	Q8WWL2	714 aa		12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362	RAD54L	Q92698	747 aa		12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362	EPSTI1	Q96J88	318 aa		12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362	CLIC6	Q96NY7	704 aa		12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362	ADPGK	Q9BRR6	497 aa		12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362	NTPCR	Q9BSD7	190 aa	Known RBP	12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362	CCSER1	Q9C0I3	900 aa		12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362	CXCL16	Q9H2A7	254 aa		12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362	ZSCAN16	Q9H4T2	348 aa	Predicted RBP	12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362	TMEM134	Q9H6X4	195 aa		12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362	CD320	Q9NPF0	282 aa		12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362	KMT5A	Q9NQR1	393 aa		12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362	SNTG2	Q9NY99	539 aa		12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362	TNFSF13B	Q9Y275	285 aa		12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362	FAN1	Q9Y2M0	1017 aa		12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362	RBM19	Q9Y4C8	960 aa	Known RBP	12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362	SRPRB	Q9Y5M8	271 aa	Known RBP	12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362	MORC2	Q9Y6X9	1032 aa	Predicted RBP	12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362	BDP1	A6H8Y1	2624 aa		12.94	□□□□□ -0.34
PSMC3-205	ENST00000528362	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	12.93	□□□□□ -0.34
PSMC3-205	ENST00000528362	PTGES	O14684	152 aa		12.93	□□□□□ -0.34
PSMC3-205	ENST00000528362	CLASP2	O75122	1294 aa	Known RBP	12.93	□□□□□ -0.34
PSMC3-205	ENST00000528362	CXCL14	O95715	111 aa		12.93	□□□□□ -0.34
PSMC3-205	ENST00000528362	EFEMP2	O95967	443 aa		12.93	□□□□□ -0.34
PSMC3-205	ENST00000528362	OR1G1	P47890	313 aa		12.93	□□□□□ -0.34
PSMC3-205	ENST00000528362	ZP2	Q05996	745 aa		12.93	□□□□□ -0.34
PSMC3-205	ENST00000528362	MCM6	Q14566	821 aa		12.93	□□□□□ -0.34
PSMC3-205	ENST00000528362	PTPN14	Q15678	1187 aa		12.93	□□□□□ -0.34
PSMC3-205	ENST00000528362	SMAD2	Q15796	467 aa	Known RBP	12.93	□□□□□ -0.34
PSMC3-205	ENST00000528362	LLGL2	Q6P1M3	1020 aa		12.93	□□□□□ -0.34
PSMC3-205	ENST00000528362	TMEM184A	Q6ZMB5	413 aa		12.93	□□□□□ -0.34
PSMC3-205	ENST00000528362	RASSF8	Q8NHQ8	419 aa		12.93	□□□□□ -0.34
PSMC3-205	ENST00000528362	RPS6KC1	Q96S38	1066 aa		12.93	□□□□□ -0.34
PSMC3-205	ENST00000528362	ACO2	Q99798	780 aa	Known RBP	12.93	□□□□□ -0.34
PSMC3-205	ENST00000528362	REEP2	Q9BRK0	252 aa		12.93	□□□□□ -0.34
PSMC3-205	ENST00000528362	TARS2	Q9BW92	718 aa	Known RBP	12.93	□□□□□ -0.34
PSMC3-205	ENST00000528362	MRPL4	Q9BYD3	311 aa	Known RBP	12.93	□□□□□ -0.34
PSMC3-205	ENST00000528362	CDT1	Q9H211	546 aa		12.93	□□□□□ -0.34
PSMC3-205	ENST00000528362	PTPRH	Q9HD43	1115 aa		12.93	□□□□□ -0.34
PSMC3-205	ENST00000528362	FAM50B	Q9Y247	325 aa		12.93	□□□□□ -0.34
PSMC3-205	ENST00000528362	IRAK3	Q9Y616	596 aa		12.93	□□□□□ -0.34
PSMC3-205	ENST00000528362	ATG2A	Q2TAZ0	1938 aa		12.92	□□□□□ -0.34
PSMC3-205	ENST00000528362	ABLIM1	O14639	778 aa		12.92	□□□□□ -0.34
PSMC3-205	ENST00000528362	MAPT	P10636	758 aa	Known RBP	12.92	□□□□□ -0.34
PSMC3-205	ENST00000528362	PROZ	P22891	400 aa		12.92	□□□□□ -0.34
PSMC3-205	ENST00000528362	CA8	P35219	290 aa		12.92	□□□□□ -0.34
PSMC3-205	ENST00000528362	NASP	P49321	788 aa	Predicted RBP	12.92	□□□□□ -0.34
PSMC3-205	ENST00000528362	DHX8	Q14562	1220 aa	Known RBP	12.92	□□□□□ -0.34
PSMC3-205	ENST00000528362	BMS1	Q14692	1282 aa	Known RBP	12.92	□□□□□ -0.34
PSMC3-205	ENST00000528362	SLC39A14	Q15043	492 aa		12.92	□□□□□ -0.34
PSMC3-205	ENST00000528362	ZNF568	Q3ZCX4	644 aa		12.92	□□□□□ -0.34
PSMC3-205	ENST00000528362	SYCE2	Q6PIF2	218 aa		12.92	□□□□□ -0.34
PSMC3-205	ENST00000528362	TAS1R1	Q7RTX1	841 aa		12.92	□□□□□ -0.34
PSMC3-205	ENST00000528362	RNF168	Q8IYW5	571 aa	Predicted RBP	12.92	□□□□□ -0.34
PSMC3-205	ENST00000528362	CEP120	Q8N960	986 aa		12.92	□□□□□ -0.34
PSMC3-205	ENST00000528362	HERC2P3	Q9BVR0	1158 aa		12.92	□□□□□ -0.34
PSMC3-205	ENST00000528362	CACNG4	Q9UBN1	327 aa		12.92	□□□□□ -0.34
PSMC3-205	ENST00000528362	STK39	Q9UEW8	545 aa		12.92	□□□□□ -0.34
PSMC3-205	ENST00000528362	ODF2L	Q9ULJ1	636 aa		12.92	□□□□□ -0.34
PSMC3-205	ENST00000528362	GDA	Q9Y2T3	454 aa		12.92	□□□□□ -0.34

Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms