RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 DCAF4L1Q3SXM0 396 aa13.33□□□□□ -0.28
TRAPPC4-209ENST00000528230 ARSHQ5FYA8 562 aa13.33□□□□□ -0.28
TRAPPC4-209ENST00000528230 NT5DC1Q5TFE4 455 aa13.33□□□□□ -0.28
TRAPPC4-209ENST00000528230 ATF7IP2Q5U623 682 aa13.33□□□□□ -0.28
TRAPPC4-209ENST00000528230 FAM173BQ6P4H8 233 aa13.33□□□□□ -0.28
TRAPPC4-209ENST00000528230 TMEM184AQ6ZMB5 413 aa13.33□□□□□ -0.28
TRAPPC4-209ENST00000528230 RBM23Q86U06 439 aaKnown RBP13.33□□□□□ -0.28
TRAPPC4-209ENST00000528230 VPS52Q8N1B4 723 aa13.33□□□□□ -0.28
TRAPPC4-209ENST00000528230 KCNN1Q92952 543 aa13.33□□□□□ -0.28
TRAPPC4-209ENST00000528230 KIFC3Q9BVG8 833 aa13.33□□□□□ -0.28
TRAPPC4-209ENST00000528230 APOL6Q9BWW8 343 aa13.33□□□□□ -0.28
TRAPPC4-209ENST00000528230 BLOC1S4Q9NUP1 217 aa13.33□□□□□ -0.28
TRAPPC4-209ENST00000528230 LARSQ9P2J5 1176 aaKnown RBP13.33□□□□□ -0.28
TRAPPC4-209ENST00000528230 PARP2Q9UGN5 583 aa13.33□□□□□ -0.28
TRAPPC4-209ENST00000528230 FBXO2Q9UK22 296 aaPredicted RBP13.33□□□□□ -0.28
TRAPPC4-209ENST00000528230 ODF2LQ9ULJ1 636 aa13.33□□□□□ -0.28
TRAPPC4-209ENST00000528230 PCDHGC5Q9Y5F6 944 aa13.33□□□□□ -0.28
TRAPPC4-209ENST00000528230 SFI1A8K8P3 1242 aa13.32□□□□□ -0.28
TRAPPC4-209ENST00000528230 H0YCG3 227 aa13.32□□□□□ -0.28
TRAPPC4-209ENST00000528230 PER2O15055 1255 aa13.32□□□□□ -0.28
TRAPPC4-209ENST00000528230 LINC01565O15544 149 aa13.32□□□□□ -0.28
TRAPPC4-209ENST00000528230 B4GALT3O60512 393 aa13.32□□□□□ -0.28
TRAPPC4-209ENST00000528230 TBX10O75333 385 aa13.32□□□□□ -0.28
TRAPPC4-209ENST00000528230 NR1I2O75469 434 aa13.32□□□□□ -0.28
TRAPPC4-209ENST00000528230 CXCL14O95715 111 aa13.32□□□□□ -0.28
TRAPPC4-209ENST00000528230 EDN1P05305 212 aa13.32□□□□□ -0.28
TRAPPC4-209ENST00000528230 CTSAP10619 480 aa13.32□□□□□ -0.28
TRAPPC4-209ENST00000528230 LIG1P18858 919 aa13.32□□□□□ -0.28
TRAPPC4-209ENST00000528230 PLCG1P19174 1290 aa13.32□□□□□ -0.28
TRAPPC4-209ENST00000528230 MARCKSP29966 332 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC4-209ENST00000528230 DDIT3P35638 169 aa13.32□□□□□ -0.28
TRAPPC4-209ENST00000528230 NASPP49321 788 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC4-209ENST00000528230 NDUFV1P49821 464 aa13.32□□□□□ -0.28
TRAPPC4-209ENST00000528230 SCNN1GP51170 649 aa13.32□□□□□ -0.28
TRAPPC4-209ENST00000528230 DLX2Q07687 328 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC4-209ENST00000528230 GRIK3Q13003 919 aa13.32□□□□□ -0.28
TRAPPC4-209ENST00000528230 COASYQ13057 564 aa13.32□□□□□ -0.28
TRAPPC4-209ENST00000528230 KCNC3Q14003 757 aa13.32□□□□□ -0.28
TRAPPC4-209ENST00000528230 KARSQ15046 597 aaKnown RBP13.32□□□□□ -0.28
TRAPPC4-209ENST00000528230 PLPP4Q5VZY2 271 aa13.32□□□□□ -0.28
TRAPPC4-209ENST00000528230 TMEM173Q86WV6 379 aaPredicted RBP13.32□□□□□ -0.28
TRAPPC4-209ENST00000528230 RASSF8Q8NHQ8 419 aa13.32□□□□□ -0.28
TRAPPC4-209ENST00000528230 RAD54LQ92698 747 aa13.32□□□□□ -0.28
TRAPPC4-209ENST00000528230 MSLNLQ96KJ4 702 aa13.32□□□□□ -0.28
TRAPPC4-209ENST00000528230 ZFP42Q96MM3 310 aa13.32□□□□□ -0.28
TRAPPC4-209ENST00000528230 USP28Q96RU2 1077 aa13.32□□□□□ -0.28
TRAPPC4-209ENST00000528230 ACO2Q99798 780 aaKnown RBP13.32□□□□□ -0.28
TRAPPC4-209ENST00000528230 MRPL4Q9BYD3 311 aaKnown RBP13.32□□□□□ -0.28
TRAPPC4-209ENST00000528230 ZBP1Q9H171 429 aa13.32□□□□□ -0.28
TRAPPC4-209ENST00000528230 PTPRHQ9HD43 1115 aa13.32□□□□□ -0.28
TRAPPC4-209ENST00000528230 CLEC1BQ9P126 229 aa13.32□□□□□ -0.28
TRAPPC4-209ENST00000528230 CCDC39Q9UFE4 941 aa13.32□□□□□ -0.28
TRAPPC4-209ENST00000528230 CD207Q9UJ71 328 aa13.32□□□□□ -0.28
TRAPPC4-209ENST00000528230 A0A0C4DFX4 3053 aa13.31□□□□□ -0.28
TRAPPC4-209ENST00000528230 C2orf71A6NGG8 1288 aa13.31□□□□□ -0.28
TRAPPC4-209ENST00000528230 HIDE1A8MVS5 230 aa13.31□□□□□ -0.28
TRAPPC4-209ENST00000528230 SLC16A4O15374 487 aa13.31□□□□□ -0.28
TRAPPC4-209ENST00000528230 GLP2RO95838 553 aa13.31□□□□□ -0.28
TRAPPC4-209ENST00000528230 SRGAP2BP0DMP2 458 aa13.31□□□□□ -0.28
TRAPPC4-209ENST00000528230 TXLNAP40222 546 aa13.31□□□□□ -0.28
TRAPPC4-209ENST00000528230 CEBPZQ03701 1054 aaKnown RBP13.31□□□□□ -0.28
TRAPPC4-209ENST00000528230 SMAD4Q13485 552 aaKnown RBP13.31□□□□□ -0.28
TRAPPC4-209ENST00000528230 EEF1DP3Q658K8 133 aa13.31□□□□□ -0.28
TRAPPC4-209ENST00000528230 TAS1R3Q7RTX0 852 aa13.31□□□□□ -0.28
TRAPPC4-209ENST00000528230 GPBP1Q86WP2 473 aa13.31□□□□□ -0.28
TRAPPC4-209ENST00000528230 FAM178BQ8IXR5 827 aa13.31□□□□□ -0.28
TRAPPC4-209ENST00000528230 KRI1Q8N9T8 703 aaKnown RBP13.31□□□□□ -0.28
TRAPPC4-209ENST00000528230 TMEM161BQ8NDZ6 487 aa13.31□□□□□ -0.28
TRAPPC4-209ENST00000528230 BCL7CQ8WUZ0 217 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC4-209ENST00000528230 LARP4BQ92615 738 aaKnown RBP13.31□□□□□ -0.28
TRAPPC4-209ENST00000528230 EPSTI1Q96J88 318 aa13.31□□□□□ -0.28
TRAPPC4-209ENST00000528230 ZNF396Q96N95 335 aaPredicted RBP13.31□□□□□ -0.28
TRAPPC4-209ENST00000528230 RPS6KC1Q96S38 1066 aa13.31□□□□□ -0.28
TRAPPC4-209ENST00000528230 COLEC11Q9BWP8 271 aa13.31□□□□□ -0.28
TRAPPC4-209ENST00000528230 SNTG2Q9NY99 539 aa13.31□□□□□ -0.28
TRAPPC4-209ENST00000528230 STK17AQ9UEE5 414 aa13.31□□□□□ -0.28
TRAPPC4-209ENST00000528230 PRKAG3Q9UGI9 489 aa13.31□□□□□ -0.28
TRAPPC4-209ENST00000528230 USP20Q9Y2K6 914 aa13.31□□□□□ -0.28
TRAPPC4-209ENST00000528230 CITO14578 2027 aa13.3□□□□□ -0.28
TRAPPC4-209ENST00000528230 NCOR1O75376 2440 aa13.3□□□□□ -0.28
TRAPPC4-209ENST00000528230 MBTPS2O43462 519 aa13.3□□□□□ -0.28
TRAPPC4-209ENST00000528230 RECQL4O94761 1208 aa13.3□□□□□ -0.28
TRAPPC4-209ENST00000528230 BRD1O95696 1058 aa13.3□□□□□ -0.28
TRAPPC4-209ENST00000528230 EFEMP2O95967 443 aa13.3□□□□□ -0.28
TRAPPC4-209ENST00000528230 THP07101 528 aa13.3□□□□□ -0.28
TRAPPC4-209ENST00000528230 MAPTP10636 758 aaKnown RBP13.3□□□□□ -0.28
TRAPPC4-209ENST00000528230 IL9P15248 144 aa13.3□□□□□ -0.28
TRAPPC4-209ENST00000528230 PROZP22891 400 aa13.3□□□□□ -0.28
TRAPPC4-209ENST00000528230 OR1G1P47890 313 aa13.3□□□□□ -0.28
TRAPPC4-209ENST00000528230 ZNF131P52739 623 aa13.3□□□□□ -0.28
TRAPPC4-209ENST00000528230 RAD51AP2Q09MP3 1159 aa13.3□□□□□ -0.28
TRAPPC4-209ENST00000528230 STRN3Q13033 797 aa13.3□□□□□ -0.28
TRAPPC4-209ENST00000528230 TUSC3Q13454 348 aa13.3□□□□□ -0.28
TRAPPC4-209ENST00000528230 MCM6Q14566 821 aa13.3□□□□□ -0.28
TRAPPC4-209ENST00000528230 SMAD2Q15796 467 aaKnown RBP13.3□□□□□ -0.28
TRAPPC4-209ENST00000528230 USP49Q70CQ1 688 aa13.3□□□□□ -0.28
TRAPPC4-209ENST00000528230 LINC00301Q8NCQ3 95 aa13.3□□□□□ -0.28
TRAPPC4-209ENST00000528230 LRRC15Q8TF66 581 aa13.3□□□□□ -0.28
TRAPPC4-209ENST00000528230 NECAB3Q96P71 396 aaPredicted RBP13.3□□□□□ -0.28
TRAPPC4-209ENST00000528230 REEP2Q9BRK0 252 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms