RNA–Protein interactions for RNA: ENST00000526954.5

CAPN1-205, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 754 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-205ENST00000526954 NPTXRO95502 500 aa18.06■□□□□ 0.48
CAPN1-205ENST00000526954 CCDC192P0DO97 292 aa18.06■□□□□ 0.48
CAPN1-205ENST00000526954 LRRC63Q05C16 580 aa18.06■□□□□ 0.48
CAPN1-205ENST00000526954 MYBPC2Q14324 1141 aa18.06■□□□□ 0.48
CAPN1-205ENST00000526954 NOLC1Q14978 699 aaKnown RBP eCLIP18.06■□□□□ 0.48
CAPN1-205ENST00000526954 EDRF1Q3B7T1 1238 aa18.06■□□□□ 0.48
CAPN1-205ENST00000526954 ZNF568Q3ZCX4 644 aa18.06■□□□□ 0.48
CAPN1-205ENST00000526954 MRPL10Q7Z7H8 261 aaKnown RBP18.06■□□□□ 0.48
CAPN1-205ENST00000526954 SLC9A9Q8IVB4 645 aa18.06■□□□□ 0.48
CAPN1-205ENST00000526954 HERVK_113Q902F9 699 aa18.06■□□□□ 0.48
CAPN1-205ENST00000526954 GDF15Q99988 308 aa18.06■□□□□ 0.48
CAPN1-205ENST00000526954 BUD13Q9BRD0 619 aaKnown RBP eCLIP18.06■□□□□ 0.482e-6■■■□□ 15.4
CAPN1-205ENST00000526954 ANKFY1Q9P2R3 1169 aa18.06■□□□□ 0.48
CAPN1-205ENST00000526954 PCDHB2Q9Y5E7 798 aa18.06■□□□□ 0.48
CAPN1-205ENST00000526954 BICDL2A1A5D9 508 aa18.05■□□□□ 0.48
CAPN1-205ENST00000526954 CALUO43852 315 aaPredicted RBP18.05■□□□□ 0.48
CAPN1-205ENST00000526954 FAM189A1O60320 539 aa18.05■□□□□ 0.48
CAPN1-205ENST00000526954 ERCC5P28715 1186 aaPredicted RBP18.05■□□□□ 0.48
CAPN1-205ENST00000526954 PAK1Q13153 545 aa18.05■□□□□ 0.48
CAPN1-205ENST00000526954 ARMCX5Q6P1M9 558 aa18.05■□□□□ 0.48
CAPN1-205ENST00000526954 ZBTB33Q86T24 672 aa18.05■□□□□ 0.48
CAPN1-205ENST00000526954 ECHDC2Q86YB7 292 aa18.05■□□□□ 0.48
CAPN1-205ENST00000526954 CRIPAKQ8N1N5 446 aa18.05■□□□□ 0.48
CAPN1-205ENST00000526954 SMG8Q8ND04 991 aaKnown RBP18.05■□□□□ 0.48
CAPN1-205ENST00000526954 NELFBQ8WX92 580 aa18.05■□□□□ 0.48
CAPN1-205ENST00000526954 POMGNT1Q8WZA1 660 aa18.05■□□□□ 0.48
CAPN1-205ENST00000526954 CBWD1Q9BRT8 395 aa18.05■□□□□ 0.48
CAPN1-205ENST00000526954 MSTO1Q9BUK6 570 aa18.05■□□□□ 0.48
CAPN1-205ENST00000526954 TRIM6Q9C030 488 aaPredicted RBP18.05■□□□□ 0.48
CAPN1-205ENST00000526954 ELAC1Q9H777 363 aaKnown RBP18.05■□□□□ 0.48
CAPN1-205ENST00000526954 DMAC2Q9NW81 257 aa18.05■□□□□ 0.48
CAPN1-205ENST00000526954 RNF216Q9NWF9 866 aaPredicted RBP18.05■□□□□ 0.48
CAPN1-205ENST00000526954 AGO2Q9UKV8 859 aaKnown RBP18.05■□□□□ 0.48
CAPN1-205ENST00000526954 PDE4DIPQ5VU43 2346 aa18.05■□□□□ 0.48
CAPN1-205ENST00000526954 OGTO15294 1046 aa18.04■□□□□ 0.48
CAPN1-205ENST00000526954 EOMESO95936 686 aa18.04■□□□□ 0.48
CAPN1-205ENST00000526954 MATR3P43243 847 aaKnown RBP eCLIP18.04■□□□□ 0.48
CAPN1-205ENST00000526954 PMS1P54277 932 aaKnown RBP18.04■□□□□ 0.48
CAPN1-205ENST00000526954 WDR5P61964 334 aaKnown RBP18.04■□□□□ 0.48
CAPN1-205ENST00000526954 KYAT1Q16773 422 aa18.04■□□□□ 0.48
CAPN1-205ENST00000526954 ANKRD40Q6AI12 368 aa18.04■□□□□ 0.48
CAPN1-205ENST00000526954 KLHL10Q6JEL2 608 aa18.04■□□□□ 0.48
CAPN1-205ENST00000526954 OTOP2Q7RTS6 562 aa18.04■□□□□ 0.48
CAPN1-205ENST00000526954 ZNF598Q86UK7 904 aaKnown RBP18.04■□□□□ 0.48
CAPN1-205ENST00000526954 TSG101Q99816 390 aa18.04■□□□□ 0.48
CAPN1-205ENST00000526954 RWDD2AQ9UIY3 292 aa18.04■□□□□ 0.48
CAPN1-205ENST00000526954 CTNND2Q9UQB3 1225 aa18.04■□□□□ 0.48
CAPN1-205ENST00000526954 IPPQ9Y573 584 aa18.04■□□□□ 0.48
CAPN1-205ENST00000526954 CITO14578 2027 aa18.04■□□□□ 0.48
CAPN1-205ENST00000526954 PTPRSQ13332 1948 aa18.04■□□□□ 0.48
CAPN1-205ENST00000526954 CEP290O15078 2479 aa18.03■□□□□ 0.48
CAPN1-205ENST00000526954 CLIC2O15247 247 aa18.03■□□□□ 0.48
CAPN1-205ENST00000526954 LDHAP00338 332 aaKnown RBP18.03■□□□□ 0.48
CAPN1-205ENST00000526954 NR3C1P04150 777 aa18.03■□□□□ 0.48
CAPN1-205ENST00000526954 ATF7P17544 494 aaPredicted RBP18.03■□□□□ 0.48
CAPN1-205ENST00000526954 GRM5P41594 1212 aa18.03■□□□□ 0.48
CAPN1-205ENST00000526954 POU5F1Q01860 360 aaKnown RBP18.03■□□□□ 0.48
CAPN1-205ENST00000526954 HSP90AA2PQ14568 343 aaPredicted RBP18.03■□□□□ 0.48
CAPN1-205ENST00000526954 RASIP1Q5U651 963 aa18.03■□□□□ 0.48
CAPN1-205ENST00000526954 TTI2Q6NXR4 508 aa18.03■□□□□ 0.48
CAPN1-205ENST00000526954 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.03■□□□□ 0.48
CAPN1-205ENST00000526954 ZC3H3Q8IXZ2 948 aaKnown RBP18.03■□□□□ 0.48
CAPN1-205ENST00000526954 FBXL18Q96ME1 805 aa18.03■□□□□ 0.48
CAPN1-205ENST00000526954 TMEM161AQ9NX61 479 aa18.03■□□□□ 0.48
CAPN1-205ENST00000526954 HSPBP1Q9NZL4 362 aa18.03■□□□□ 0.48
CAPN1-205ENST00000526954 TRIM49BA6NDI0 452 aa18.02■□□□□ 0.48
CAPN1-205ENST00000526954 AMHP03971 560 aa18.02■□□□□ 0.48
CAPN1-205ENST00000526954 RPL13P26373 211 aaKnown RBP18.02■□□□□ 0.48
CAPN1-205ENST00000526954 BMP8BP34820 402 aa18.02■□□□□ 0.48
CAPN1-205ENST00000526954 THNSL1Q8IYQ7 743 aa18.02■□□□□ 0.48
CAPN1-205ENST00000526954 HACE1Q8IYU2 909 aa18.02■□□□□ 0.48
CAPN1-205ENST00000526954 GPD1LQ8N335 351 aa18.02■□□□□ 0.48
CAPN1-205ENST00000526954 CEP120Q8N960 986 aa18.02■□□□□ 0.48
CAPN1-205ENST00000526954 XXYLT1Q8NBI6 393 aa18.02■□□□□ 0.48
CAPN1-205ENST00000526954 PGBD4Q96DM1 585 aa18.02■□□□□ 0.48
CAPN1-205ENST00000526954 MED15Q96RN5 788 aa18.02■□□□□ 0.48
CAPN1-205ENST00000526954 DUSP9Q99956 384 aaKnown RBP18.02■□□□□ 0.48
CAPN1-205ENST00000526954 MTIF3Q9H2K0 278 aaKnown RBP18.02■□□□□ 0.48
CAPN1-205ENST00000526954 NXF3Q9H4D5 531 aaKnown RBP18.02■□□□□ 0.48
CAPN1-205ENST00000526954 PCIF1Q9H4Z3 704 aa18.02■□□□□ 0.48
CAPN1-205ENST00000526954 KIAA1586Q9HCI6 787 aa18.02■□□□□ 0.48
CAPN1-205ENST00000526954 TRIP11Q15643 1979 aa18.02■□□□□ 0.47
CAPN1-205ENST00000526954 ANK1P16157 1881 aa18.01■□□□□ 0.47
CAPN1-205ENST00000526954 EXTL3O43909 919 aa18.01■□□□□ 0.47
CAPN1-205ENST00000526954 CLTAP09496 248 aa18.01■□□□□ 0.47
CAPN1-205ENST00000526954 STAG3L1P0CL83 205 aa18.01■□□□□ 0.47
CAPN1-205ENST00000526954 HARSP12081 509 aaKnown RBP18.01■□□□□ 0.47
CAPN1-205ENST00000526954 NR2F2P24468 414 aa18.01■□□□□ 0.47
CAPN1-205ENST00000526954 CYP2J2P51589 502 aa18.01■□□□□ 0.47
CAPN1-205ENST00000526954 STX17P56962 302 aa18.01■□□□□ 0.47
CAPN1-205ENST00000526954 FKBP3Q00688 224 aaKnown RBP18.01■□□□□ 0.47
CAPN1-205ENST00000526954 ADAM9Q13443 819 aa18.01■□□□□ 0.47
CAPN1-205ENST00000526954 CRELD2Q6UXH1 353 aaPredicted RBP18.01■□□□□ 0.47
CAPN1-205ENST00000526954 C11orf57Q6ZUT1 292 aaPredicted RBP18.01■□□□□ 0.47
CAPN1-205ENST00000526954 NPAS4Q8IUM7 802 aa18.01■□□□□ 0.47
CAPN1-205ENST00000526954 TOP1MTQ969P6 601 aa18.01■□□□□ 0.47
CAPN1-205ENST00000526954 ACAP3Q96P50 834 aa18.01■□□□□ 0.47
CAPN1-205ENST00000526954 CCDC94Q9BW85 323 aaPredicted RBP18.01■□□□□ 0.47
CAPN1-205ENST00000526954 NAT10Q9H0A0 1025 aaKnown RBP18.01■□□□□ 0.47
CAPN1-205ENST00000526954 GZF1Q9H116 711 aaPredicted RBP18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms