RNA–Protein interactions for RNA: ENST00000526877.1

SSSCA1-203, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-203ENST00000526877 IGKV6-21A0A0C4DH24 114 aa13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 C5orf67F2Z3F1 127 aa13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 ASAP2O43150 1006 aa13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 RPS6KA5O75582 802 aa13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 PRPF6O94906 941 aaKnown RBP13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 FGFR1OPO95684 399 aaKnown RBP13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 MYBP10242 640 aa13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 BMPR1AP36894 532 aa13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 CLCN3P51790 818 aa13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 NCKAP1LP55160 1127 aa13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 LRRC63Q05C16 580 aa13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 NFX1Q12986 1120 aaKnown RBP13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 MXD4Q14582 209 aaPredicted RBP13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 NCAPHQ15003 741 aa13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 KNOP1Q1ED39 458 aaKnown RBP13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 CENPPQ6IPU0 288 aa13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 FOXR2Q6PJQ5 311 aa13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 HAUS6Q7Z4H7 955 aa13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 NPAS4Q8IUM7 802 aa13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 NELFCDQ8IXH7 590 aa13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 LRRC71Q8N4P6 559 aa13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 METTL13Q8N6R0 699 aa13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 GLIS3Q8NEA6 775 aa13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 NOC3LQ8WTT2 800 aaKnown RBP13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 SCFD1Q8WVM8 642 aa13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 PSPC1Q8WXF1 523 aaKnown RBP13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 HVCN1Q96D96 273 aa13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 MRPL38Q96DV4 380 aaKnown RBP13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 PPP1R16BQ96T49 567 aa13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 OSMRQ99650 979 aa13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 NTPCRQ9BSD7 190 aaKnown RBP13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 FGFBP2Q9BYJ0 223 aa13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 ST6GALNAC4Q9H4F1 302 aa13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 SUCLA2Q9P2R7 463 aaPredicted RBP13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 ST3GAL5Q9UNP4 418 aa13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 COG5Q9UP83 839 aa13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 NFE2L3Q9Y4A8 694 aa13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 ATG2AQ2TAZ0 1938 aa13.9□□□□□ -0.18
SSSCA1-203ENST00000526877 ADGRA3Q8IWK6 1321 aa13.9□□□□□ -0.19
SSSCA1-203ENST00000526877 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.89□□□□□ -0.19
SSSCA1-203ENST00000526877 C9IYK1 514 aa13.89□□□□□ -0.19
SSSCA1-203ENST00000526877 SLC16A4O15374 487 aa13.89□□□□□ -0.19
SSSCA1-203ENST00000526877 CDK11BP21127 795 aaKnown RBP13.89□□□□□ -0.19
SSSCA1-203ENST00000526877 NAMPTP43490 491 aa13.89□□□□□ -0.19
SSSCA1-203ENST00000526877 NPTX2P47972 431 aa13.89□□□□□ -0.19
SSSCA1-203ENST00000526877 CASP5P51878 434 aa13.89□□□□□ -0.19
SSSCA1-203ENST00000526877 NLRP11P59045 1033 aaKnown RBP13.89□□□□□ -0.19
SSSCA1-203ENST00000526877 FAM189BP81408 668 aa13.89□□□□□ -0.19
SSSCA1-203ENST00000526877 GTF2BQ00403 316 aa13.89□□□□□ -0.19
SSSCA1-203ENST00000526877 PLCB2Q00722 1185 aa13.89□□□□□ -0.19
SSSCA1-203ENST00000526877 GPM6BQ13491 265 aa13.89□□□□□ -0.19
SSSCA1-203ENST00000526877 TFDP1Q14186 410 aa13.89□□□□□ -0.19
SSSCA1-203ENST00000526877 DSC3Q14574 896 aa13.89□□□□□ -0.19
SSSCA1-203ENST00000526877 SKIV2LQ15477 1246 aaKnown RBP13.89□□□□□ -0.19
SSSCA1-203ENST00000526877 BMT2Q1RMZ1 405 aa13.89□□□□□ -0.19
SSSCA1-203ENST00000526877 ZC2HC1CQ53FD0 456 aaPredicted RBP13.89□□□□□ -0.19
SSSCA1-203ENST00000526877 ANKRD40Q6AI12 368 aa13.89□□□□□ -0.19
SSSCA1-203ENST00000526877 PPP4R3CPQ6ZMV5 832 aa13.89□□□□□ -0.19
SSSCA1-203ENST00000526877 FAM228AQ86W67 206 aa13.89□□□□□ -0.19
SSSCA1-203ENST00000526877 SYCP3Q8IZU3 236 aa13.89□□□□□ -0.19
SSSCA1-203ENST00000526877 DEPTORQ8TB45 409 aa13.89□□□□□ -0.19
SSSCA1-203ENST00000526877 ACCSQ96QU6 501 aa13.89□□□□□ -0.19
SSSCA1-203ENST00000526877 FIZ1Q96SL8 496 aa13.89□□□□□ -0.19
SSSCA1-203ENST00000526877 TMEM206Q9H813 350 aa13.89□□□□□ -0.19
SSSCA1-203ENST00000526877 RGS18Q9NS28 235 aa13.89□□□□□ -0.19
SSSCA1-203ENST00000526877 FANCLQ9NW38 375 aa13.89□□□□□ -0.19
SSSCA1-203ENST00000526877 EXOC7Q9UPT5 735 aa13.89□□□□□ -0.19
SSSCA1-203ENST00000526877 FNDC1Q4ZHG4 1894 aaPredicted RBP13.89□□□□□ -0.19
SSSCA1-203ENST00000526877 KIAA1671Q9BY89 1806 aa13.88□□□□□ -0.19
SSSCA1-203ENST00000526877 TRIM49BA6NDI0 452 aa13.88□□□□□ -0.19
SSSCA1-203ENST00000526877 LRRIQ4A6NIV6 560 aa13.88□□□□□ -0.19
SSSCA1-203ENST00000526877 PDXKO00764 312 aa13.88□□□□□ -0.19
SSSCA1-203ENST00000526877 GPR182O15218 404 aa13.88□□□□□ -0.19
SSSCA1-203ENST00000526877 CALUO43852 315 aaPredicted RBP13.88□□□□□ -0.19
SSSCA1-203ENST00000526877 RB1P06400 928 aa13.88□□□□□ -0.19
SSSCA1-203ENST00000526877 STAG3L1P0CL83 205 aa13.88□□□□□ -0.19
SSSCA1-203ENST00000526877 GLRA2P23416 452 aa13.88□□□□□ -0.19
SSSCA1-203ENST00000526877 KCNQ1P51787 676 aa13.88□□□□□ -0.19
SSSCA1-203ENST00000526877 PMS1P54277 932 aaKnown RBP13.88□□□□□ -0.19
SSSCA1-203ENST00000526877 DRP2Q13474 957 aa13.88□□□□□ -0.19
SSSCA1-203ENST00000526877 BTG3Q14201 252 aaPredicted RBP13.88□□□□□ -0.19
SSSCA1-203ENST00000526877 TTI2Q6NXR4 508 aa13.88□□□□□ -0.19
SSSCA1-203ENST00000526877 CMTR2Q8IYT2 770 aaKnown RBP13.88□□□□□ -0.19
SSSCA1-203ENST00000526877 ZNF710Q8N1W2 664 aa13.88□□□□□ -0.19
SSSCA1-203ENST00000526877 CSGALNACT2Q8N6G5 542 aa13.88□□□□□ -0.19
SSSCA1-203ENST00000526877 ASAP3Q8TDY4 903 aa13.88□□□□□ -0.19
SSSCA1-203ENST00000526877 PRPF31Q8WWY3 499 aaKnown RBP13.88□□□□□ -0.19
SSSCA1-203ENST00000526877 BSNDQ8WZ55 320 aa13.88□□□□□ -0.19
SSSCA1-203ENST00000526877 HLA-CQ95604 372 aa13.88□□□□□ -0.19
SSSCA1-203ENST00000526877 MED15Q96RN5 788 aa13.88□□□□□ -0.19
SSSCA1-203ENST00000526877 ADAM2Q99965 735 aa13.88□□□□□ -0.19
SSSCA1-203ENST00000526877 STRA6Q9BX79 667 aa13.88□□□□□ -0.19
SSSCA1-203ENST00000526877 XIRP2A4UGR9 3374 aa13.88□□□□□ -0.19
SSSCA1-203ENST00000526877 DENND3A2RUS2 1198 aa13.87□□□□□ -0.19
SSSCA1-203ENST00000526877 GRM6O15303 877 aa13.87□□□□□ -0.19
SSSCA1-203ENST00000526877 PPP1R37O75864 691 aa13.87□□□□□ -0.19
SSSCA1-203ENST00000526877 EIF4BP23588 611 aaKnown RBP13.87□□□□□ -0.19
SSSCA1-203ENST00000526877 GATMP50440 423 aa13.87□□□□□ -0.19
SSSCA1-203ENST00000526877 GPC3P51654 580 aa13.87□□□□□ -0.19
SSSCA1-203ENST00000526877 FKBP3Q00688 224 aaKnown RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms