RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 USP45Q70EL2 814 aa5.73□□□□□ -1.49
CSDE1-211ENST00000525970 CXXC5Q7LFL8 322 aaKnown RBP5.73□□□□□ -1.49
CSDE1-211ENST00000525970 OTOP2Q7RTS6 562 aa5.73□□□□□ -1.49
CSDE1-211ENST00000525970 RAX2Q96IS3 184 aa5.73□□□□□ -1.49
CSDE1-211ENST00000525970 SLC2A13Q96QE2 648 aa5.73□□□□□ -1.49
CSDE1-211ENST00000525970 LMF1Q96S06 567 aa5.73□□□□□ -1.49
CSDE1-211ENST00000525970 ANO3Q9BYT9 981 aa5.73□□□□□ -1.49
CSDE1-211ENST00000525970 KATNBL1Q9H079 304 aa5.73□□□□□ -1.49
CSDE1-211ENST00000525970 OR10A5Q9H207 317 aa5.73□□□□□ -1.49
CSDE1-211ENST00000525970 TMEM60Q9H2L4 133 aa5.73□□□□□ -1.49
CSDE1-211ENST00000525970 KCNG1Q9UIX4 513 aa5.73□□□□□ -1.49
CSDE1-211ENST00000525970 UBA6A0AVT1 1052 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-211ENST00000525970 FOSP01100 380 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-211ENST00000525970 MTHFD2P13995 350 aa5.72□□□□□ -1.49
CSDE1-211ENST00000525970 PDCP20941 246 aa5.72□□□□□ -1.49
CSDE1-211ENST00000525970 PAX3P23760 479 aa5.72□□□□□ -1.49
CSDE1-211ENST00000525970 POLD1P28340 1107 aa5.72□□□□□ -1.49
CSDE1-211ENST00000525970 TM4SF4P48230 202 aa5.72□□□□□ -1.49
CSDE1-211ENST00000525970 CD83Q01151 205 aa5.72□□□□□ -1.49
CSDE1-211ENST00000525970 SLC6A3Q01959 620 aa5.72□□□□□ -1.49
CSDE1-211ENST00000525970 MYBPC3Q14896 1274 aa5.72□□□□□ -1.49
CSDE1-211ENST00000525970 KRT72Q14CN4 511 aa5.72□□□□□ -1.49
CSDE1-211ENST00000525970 ZRSR2Q15696 482 aaKnown RBP5.72□□□□□ -1.49
CSDE1-211ENST00000525970 GRAMD1BQ3KR37 738 aa5.72□□□□□ -1.49
CSDE1-211ENST00000525970 INO80DQ53TQ3 878 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-211ENST00000525970 TCTN3Q6NUS6 607 aa5.72□□□□□ -1.49
CSDE1-211ENST00000525970 KANSL1Q7Z3B3 1105 aa5.72□□□□□ -1.49
CSDE1-211ENST00000525970 KIAA0319LQ8IZA0 1049 aa5.72□□□□□ -1.49
CSDE1-211ENST00000525970 THEMISQ8N1K5 641 aaPredicted RBP5.72□□□□□ -1.49
CSDE1-211ENST00000525970 PPP1R35Q8TAP8 253 aa5.72□□□□□ -1.49
CSDE1-211ENST00000525970 TSPEARQ8WU66 669 aa5.72□□□□□ -1.49
CSDE1-211ENST00000525970 C1GALT1C1Q96EU7 318 aa5.72□□□□□ -1.49
CSDE1-211ENST00000525970 MVB12AQ96EY5 273 aa5.72□□□□□ -1.49
CSDE1-211ENST00000525970 MAML3Q96JK9 1138 aa5.72□□□□□ -1.49
CSDE1-211ENST00000525970 TUBGCP5Q96RT8 1024 aa5.72□□□□□ -1.49
CSDE1-211ENST00000525970 UBA5Q9GZZ9 404 aa5.72□□□□□ -1.49
CSDE1-211ENST00000525970 POFUT1Q9H488 388 aa5.72□□□□□ -1.49
CSDE1-211ENST00000525970 CDC42EP3Q9UKI2 254 aa5.72□□□□□ -1.49
CSDE1-211ENST00000525970 EDARQ9UNE0 448 aa5.72□□□□□ -1.49
CSDE1-211ENST00000525970 HS3ST3A1Q9Y663 406 aa5.72□□□□□ -1.49
CSDE1-211ENST00000525970 NUMBLQ9Y6R0 609 aa5.72□□□□□ -1.49
CSDE1-211ENST00000525970 CCDC189A1A4V9 331 aa5.71□□□□□ -1.5
CSDE1-211ENST00000525970 FOXS1O43638 330 aa5.71□□□□□ -1.5
CSDE1-211ENST00000525970 CUTAO60888 179 aa5.71□□□□□ -1.5
CSDE1-211ENST00000525970 EDNRBP24530 442 aa5.71□□□□□ -1.5
CSDE1-211ENST00000525970 APEX1P27695 318 aaKnown RBP5.71□□□□□ -1.5
CSDE1-211ENST00000525970 KCNQ1P51787 676 aa5.71□□□□□ -1.5
CSDE1-211ENST00000525970 SLC5A3P53794 718 aa5.71□□□□□ -1.5
CSDE1-211ENST00000525970 KIF23Q02241 960 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-211ENST00000525970 ALDH6A1Q02252 535 aaKnown RBP5.71□□□□□ -1.5
CSDE1-211ENST00000525970 ROM1Q03395 351 aa5.71□□□□□ -1.5
CSDE1-211ENST00000525970 STILQ15468 1287 aa5.71□□□□□ -1.5
CSDE1-211ENST00000525970 ANO4Q32M45 955 aa5.71□□□□□ -1.5
CSDE1-211ENST00000525970 TMEM95Q3KNT9 176 aa5.71□□□□□ -1.5
CSDE1-211ENST00000525970 ZNF568Q3ZCX4 644 aa5.71□□□□□ -1.5
CSDE1-211ENST00000525970 TTC38Q5R3I4 469 aa5.71□□□□□ -1.5
CSDE1-211ENST00000525970 MBNL2Q5VZF2 373 aaKnown RBP5.71□□□□□ -1.5
CSDE1-211ENST00000525970 CCDC62Q6P9F0 684 aa5.71□□□□□ -1.5
CSDE1-211ENST00000525970 GPR155Q7Z3F1 870 aa5.71□□□□□ -1.5
CSDE1-211ENST00000525970 C7orf31Q8N865 590 aa5.71□□□□□ -1.5
CSDE1-211ENST00000525970 GIMAP8Q8ND71 665 aaPredicted RBP5.71□□□□□ -1.5
CSDE1-211ENST00000525970 FAM156AQ8NDB6 213 aa5.71□□□□□ -1.5
CSDE1-211ENST00000525970 AUTS2Q8WXX7 1259 aa5.71□□□□□ -1.5
CSDE1-211ENST00000525970 GNRHR2Q96P88 292 aa5.71□□□□□ -1.5
CSDE1-211ENST00000525970 MAP3K14Q99558 947 aa5.71□□□□□ -1.5
CSDE1-211ENST00000525970 FOXB1Q99853 325 aa5.71□□□□□ -1.5
CSDE1-211ENST00000525970 CARD11Q9BXL7 1154 aa5.71□□□□□ -1.5
CSDE1-211ENST00000525970 FAM204AQ9H8W3 233 aa5.71□□□□□ -1.5
CSDE1-211ENST00000525970 FBXO10Q9UK96 956 aa5.71□□□□□ -1.5
CSDE1-211ENST00000525970 FAM227AF5H4B4 570 aa5.7□□□□□ -1.5
CSDE1-211ENST00000525970 B3GALT2O43825 422 aa5.7□□□□□ -1.5
CSDE1-211ENST00000525970 PRPF6O94906 941 aaKnown RBP5.7□□□□□ -1.5
CSDE1-211ENST00000525970 APOL3O95236 402 aa5.7□□□□□ -1.5
CSDE1-211ENST00000525970 PRLP01236 227 aa5.7□□□□□ -1.5
CSDE1-211ENST00000525970 LPLP06858 475 aa5.7□□□□□ -1.5
CSDE1-211ENST00000525970 PFKMP08237 780 aa5.7□□□□□ -1.5
CSDE1-211ENST00000525970 MYBP10242 640 aa5.7□□□□□ -1.5
CSDE1-211ENST00000525970 WASP42768 502 aa5.7□□□□□ -1.5
CSDE1-211ENST00000525970 RGS3P49796 1198 aa5.7□□□□□ -1.5
CSDE1-211ENST00000525970 AK2P54819 239 aa5.7□□□□□ -1.5
CSDE1-211ENST00000525970 KLF10Q13118 480 aa5.7□□□□□ -1.5
CSDE1-211ENST00000525970 FOXE3Q13461 319 aa5.7□□□□□ -1.5
CSDE1-211ENST00000525970 TOP3AQ13472 1001 aaPredicted RBP5.7□□□□□ -1.5
CSDE1-211ENST00000525970 SEMA5AQ13591 1074 aa5.7□□□□□ -1.5
CSDE1-211ENST00000525970 TRIM25Q14258 630 aaKnown RBP5.7□□□□□ -1.5
CSDE1-211ENST00000525970 USP10Q14694 798 aaKnown RBP5.7□□□□□ -1.5
CSDE1-211ENST00000525970 MIIPQ5JXC2 388 aa5.7□□□□□ -1.5
CSDE1-211ENST00000525970 PRAMEF9Q5VWM5 478 aa5.7□□□□□ -1.5
CSDE1-211ENST00000525970 SLFN12LQ6IEE8 588 aa5.7□□□□□ -1.5
CSDE1-211ENST00000525970 GRAMD1CQ8IYS0 662 aa5.7□□□□□ -1.5
CSDE1-211ENST00000525970 EDAQ92838 391 aa5.7□□□□□ -1.5
CSDE1-211ENST00000525970 LRFN3Q9BTN0 628 aa5.7□□□□□ -1.5
CSDE1-211ENST00000525970 MYL10Q9BUA6 226 aa5.7□□□□□ -1.5
CSDE1-211ENST00000525970 MAF1Q9H063 256 aa5.7□□□□□ -1.5
CSDE1-211ENST00000525970 KCTD10Q9H3F6 313 aa5.7□□□□□ -1.5
CSDE1-211ENST00000525970 NLRC4Q9NPP4 1024 aa5.7□□□□□ -1.5
CSDE1-211ENST00000525970 PLCB1Q9NQ66 1216 aa5.7□□□□□ -1.5
CSDE1-211ENST00000525970 PUF60Q9UHX1 559 aaKnown RBP5.7□□□□□ -1.5
CSDE1-211ENST00000525970 L1RE1Q9UN81 338 aa5.7□□□□□ -1.5
CSDE1-211ENST00000525970 ZFR2Q9UPR6 939 aaKnown RBP5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms