RNA–Protein interactions for RNA: ENST00000525141.1

SMCO4-202, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMCO4, Length 889 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-202ENST00000525141 NPTXRO95502 500 aa13.86□□□□□ -0.19
SMCO4-202ENST00000525141 ZSCAN22P10073 491 aaPredicted RBP13.86□□□□□ -0.19
SMCO4-202ENST00000525141 EPCAMP16422 314 aa13.86□□□□□ -0.19
SMCO4-202ENST00000525141 MLH1P40692 756 aa13.86□□□□□ -0.19
SMCO4-202ENST00000525141 SCNN1GP51170 649 aa13.86□□□□□ -0.19
SMCO4-202ENST00000525141 PTPN14Q15678 1187 aa13.86□□□□□ -0.19
SMCO4-202ENST00000525141 NT5DC1Q5TFE4 455 aa13.86□□□□□ -0.19
SMCO4-202ENST00000525141 DTHD1Q6ZMT9 781 aa13.86□□□□□ -0.19
SMCO4-202ENST00000525141 MCPH1Q8NEM0 835 aa13.86□□□□□ -0.19
SMCO4-202ENST00000525141 ERMNQ8TAM6 284 aa13.86□□□□□ -0.19
SMCO4-202ENST00000525141 URGCPQ8TCY9 931 aa13.86□□□□□ -0.19
SMCO4-202ENST00000525141 KLHL5Q96PQ7 755 aa13.86□□□□□ -0.19
SMCO4-202ENST00000525141 APOL6Q9BWW8 343 aa13.86□□□□□ -0.19
SMCO4-202ENST00000525141 PHF7Q9BWX1 381 aaPredicted RBP13.86□□□□□ -0.19
SMCO4-202ENST00000525141 BHMT2Q9H2M3 363 aa13.86□□□□□ -0.19
SMCO4-202ENST00000525141 DDX19AQ9NUU7 478 aaKnown RBP13.86□□□□□ -0.19
SMCO4-202ENST00000525141 KLK14Q9P0G3 267 aa13.86□□□□□ -0.19
SMCO4-202ENST00000525141 MUTYHQ9UIF7 546 aa13.86□□□□□ -0.19
SMCO4-202ENST00000525141 GIT1Q9Y2X7 761 aa13.86□□□□□ -0.19
SMCO4-202ENST00000525141 TECTAO75443 2155 aa13.85□□□□□ -0.19
SMCO4-202ENST00000525141 ARHGEF35A5YM69 484 aa13.85□□□□□ -0.19
SMCO4-202ENST00000525141 CNPP09543 421 aaKnown RBP13.85□□□□□ -0.19
SMCO4-202ENST00000525141 HOXB8P17481 243 aaPredicted RBP13.85□□□□□ -0.19
SMCO4-202ENST00000525141 IGFBP6P24592 240 aaPredicted RBP13.85□□□□□ -0.19
SMCO4-202ENST00000525141 NCBP1Q09161 790 aaKnown RBP13.85□□□□□ -0.19
SMCO4-202ENST00000525141 HERC4Q5GLZ8 1057 aaPredicted RBP13.85□□□□□ -0.19
SMCO4-202ENST00000525141 KIAA0319Q5VV43 1072 aa13.85□□□□□ -0.19
SMCO4-202ENST00000525141 EEF1DP3Q658K8 133 aa13.85□□□□□ -0.19
SMCO4-202ENST00000525141 SLC27A1Q6PCB7 646 aa13.85□□□□□ -0.19
SMCO4-202ENST00000525141 DAW1Q8N136 415 aa13.85□□□□□ -0.19
SMCO4-202ENST00000525141 RABGGTAQ92696 567 aa13.85□□□□□ -0.19
SMCO4-202ENST00000525141 RPGRIP1Q96KN7 1286 aa13.85□□□□□ -0.19
SMCO4-202ENST00000525141 PNMA5Q96PV4 448 aa13.85□□□□□ -0.19
SMCO4-202ENST00000525141 KIFC3Q9BVG8 833 aa13.85□□□□□ -0.19
SMCO4-202ENST00000525141 PDZD7Q9H5P4 517 aa13.85□□□□□ -0.19
SMCO4-202ENST00000525141 PRMT7Q9NVM4 692 aaPredicted RBP13.85□□□□□ -0.19
SMCO4-202ENST00000525141 MYH15Q9Y2K3 1946 aa13.84□□□□□ -0.19
SMCO4-202ENST00000525141 ACKR2O00590 384 aa13.84□□□□□ -0.19
SMCO4-202ENST00000525141 SSBP05455 408 aaKnown RBP eCLIP13.84□□□□□ -0.19
SMCO4-202ENST00000525141 WEE2P0C1S8 567 aa13.84□□□□□ -0.19
SMCO4-202ENST00000525141 NAMPTP43490 491 aa13.84□□□□□ -0.19
SMCO4-202ENST00000525141 OR1G1P47890 313 aa13.84□□□□□ -0.19
SMCO4-202ENST00000525141 SF3A1Q15459 793 aaKnown RBP13.84□□□□□ -0.19
SMCO4-202ENST00000525141 C1orf186Q6ZWK4 172 aa13.84□□□□□ -0.19
SMCO4-202ENST00000525141 CASP10Q92851 521 aa13.84□□□□□ -0.19
SMCO4-202ENST00000525141 PRIMPOLQ96LW4 560 aa13.84□□□□□ -0.19
SMCO4-202ENST00000525141 FAM193BQ96PV7 902 aaPredicted RBP13.84□□□□□ -0.19
SMCO4-202ENST00000525141 POP1Q99575 1024 aaKnown RBP13.84□□□□□ -0.19
SMCO4-202ENST00000525141 PAAF1Q9BRP4 392 aa13.84□□□□□ -0.19
SMCO4-202ENST00000525141 GPR62Q9BZJ7 368 aa13.84□□□□□ -0.19
SMCO4-202ENST00000525141 ADAM7Q9H2U9 754 aa13.84□□□□□ -0.19
SMCO4-202ENST00000525141 SNTG2Q9NY99 539 aa13.84□□□□□ -0.19
SMCO4-202ENST00000525141 CACNG4Q9UBN1 327 aa13.84□□□□□ -0.19
SMCO4-202ENST00000525141 PRG3Q9Y2Y8 225 aaPredicted RBP13.84□□□□□ -0.19
SMCO4-202ENST00000525141 MORC2Q9Y6X9 1032 aaPredicted RBP13.84□□□□□ -0.19
SMCO4-202ENST00000525141 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.83□□□□□ -0.2
SMCO4-202ENST00000525141 FSD2A1L4K1 749 aa13.83□□□□□ -0.2
SMCO4-202ENST00000525141 CARNS1A5YM72 827 aa13.83□□□□□ -0.2
SMCO4-202ENST00000525141 PRR33A8MZF0 331 aa13.83□□□□□ -0.2
SMCO4-202ENST00000525141 PTGESO14684 152 aa13.83□□□□□ -0.2
SMCO4-202ENST00000525141 F13A1P00488 732 aa13.83□□□□□ -0.2
SMCO4-202ENST00000525141 MAPK7Q13164 816 aa13.83□□□□□ -0.2
SMCO4-202ENST00000525141 GIT2Q14161 759 aa13.83□□□□□ -0.2
SMCO4-202ENST00000525141 NAB2Q15742 525 aa13.83□□□□□ -0.2
SMCO4-202ENST00000525141 HAUS3Q68CZ6 603 aa13.83□□□□□ -0.2
SMCO4-202ENST00000525141 ATL3Q6DD88 541 aa13.83□□□□□ -0.2
SMCO4-202ENST00000525141 RINT1Q6NUQ1 792 aa13.83□□□□□ -0.2
SMCO4-202ENST00000525141 FAM173BQ6P4H8 233 aa13.83□□□□□ -0.2
SMCO4-202ENST00000525141 TAS1R3Q7RTX0 852 aa13.83□□□□□ -0.2
SMCO4-202ENST00000525141 SNX29Q8TEQ0 813 aa13.83□□□□□ -0.2
SMCO4-202ENST00000525141 LRRC15Q8TF66 581 aa13.83□□□□□ -0.2
SMCO4-202ENST00000525141 EDAQ92838 391 aa13.83□□□□□ -0.2
SMCO4-202ENST00000525141 CCDC43Q96MW1 224 aaKnown RBP13.83□□□□□ -0.2
SMCO4-202ENST00000525141 ZNF396Q96N95 335 aaPredicted RBP13.83□□□□□ -0.2
SMCO4-202ENST00000525141 RUSC1Q9BVN2 902 aa13.83□□□□□ -0.2
SMCO4-202ENST00000525141 RXFP1Q9HBX9 757 aa13.83□□□□□ -0.2
SMCO4-202ENST00000525141 CHST7Q9NS84 486 aa13.83□□□□□ -0.2
SMCO4-202ENST00000525141 PARP2Q9UGN5 583 aa13.83□□□□□ -0.2
SMCO4-202ENST00000525141 TDRD15B5MCY1 1934 aaKnown RBP13.83□□□□□ -0.2
SMCO4-202ENST00000525141 TRIP11Q15643 1979 aa13.82□□□□□ -0.2
SMCO4-202ENST00000525141 SFI1A8K8P3 1242 aa13.82□□□□□ -0.2
SMCO4-202ENST00000525141 SOD2P04179 222 aa13.82□□□□□ -0.2
SMCO4-202ENST00000525141 PRKCBP05771 671 aa13.82□□□□□ -0.2
SMCO4-202ENST00000525141 CA8P35219 290 aa13.82□□□□□ -0.2
SMCO4-202ENST00000525141 CLCN4P51793 760 aa13.82□□□□□ -0.2
SMCO4-202ENST00000525141 PRPF4BQ13523 1007 aaKnown RBP13.82□□□□□ -0.2
SMCO4-202ENST00000525141 PTPAQ15257 358 aa13.82□□□□□ -0.2
SMCO4-202ENST00000525141 HYIQ5T013 277 aa13.82□□□□□ -0.2
SMCO4-202ENST00000525141 CD300LGQ6UXG3 332 aa13.82□□□□□ -0.2
SMCO4-202ENST00000525141 ZBTB8OSQ8IWT0 167 aa13.82□□□□□ -0.2
SMCO4-202ENST00000525141 KCTD17Q8N5Z5 321 aa13.82□□□□□ -0.2
SMCO4-202ENST00000525141 DEPTORQ8TB45 409 aa13.82□□□□□ -0.2
SMCO4-202ENST00000525141 B3GALT6Q96L58 329 aa13.82□□□□□ -0.2
SMCO4-202ENST00000525141 AK8Q96MA6 479 aa13.82□□□□□ -0.2
SMCO4-202ENST00000525141 RPS6KC1Q96S38 1066 aa13.82□□□□□ -0.2
SMCO4-202ENST00000525141 HERC2P3Q9BVR0 1158 aa13.82□□□□□ -0.2
SMCO4-202ENST00000525141 TRIM6Q9C030 488 aaPredicted RBP13.82□□□□□ -0.2
SMCO4-202ENST00000525141 C2orf40Q9H1Z8 148 aa13.82□□□□□ -0.2
SMCO4-202ENST00000525141 POMKQ9H5K3 350 aa13.82□□□□□ -0.2
SMCO4-202ENST00000525141 PTPRHQ9HD43 1115 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms