RNA–Protein interactions for RNA: ENST00000524927.1

NEDD8-203, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 2 BASIC

Gene NEDD8, Length 653 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-203ENST00000524927 RPGRIP1Q96KN7 1286 aa8.49□□□□□ -1.05
NEDD8-203ENST00000524927 HNRNPABQ99729 332 aaKnown RBP8.49□□□□□ -1.05
NEDD8-203ENST00000524927 SPATA9Q9BWV2 254 aa8.49□□□□□ -1.05
NEDD8-203ENST00000524927 ASPNQ9BXN1 380 aa8.49□□□□□ -1.05
NEDD8-203ENST00000524927 GBP3Q9H0R5 595 aa8.49□□□□□ -1.05
NEDD8-203ENST00000524927 MFSD1Q9H3U5 465 aa8.49□□□□□ -1.05
NEDD8-203ENST00000524927 KANSL2Q9H9L4 492 aa8.49□□□□□ -1.05
NEDD8-203ENST00000524927 DDX4Q9NQI0 724 aaKnown RBP8.49□□□□□ -1.05
NEDD8-203ENST00000524927 CNNM1Q9NRU3 951 aa8.49□□□□□ -1.05
NEDD8-203ENST00000524927 HERC5Q9UII4 1024 aaKnown RBP8.49□□□□□ -1.05
NEDD8-203ENST00000524927 MAP3K2Q9Y2U5 619 aa8.49□□□□□ -1.05
NEDD8-203ENST00000524927 MYO7AQ13402 2215 aa8.49□□□□□ -1.05
NEDD8-203ENST00000524927 PTPN13Q12923 2485 aa8.48□□□□□ -1.05
NEDD8-203ENST00000524927 EOMESO95936 686 aa8.48□□□□□ -1.05
NEDD8-203ENST00000524927 FCER1AP12319 257 aa8.48□□□□□ -1.05
NEDD8-203ENST00000524927 ATF7P17544 494 aaPredicted RBP8.48□□□□□ -1.05
NEDD8-203ENST00000524927 AOC1P19801 751 aa8.48□□□□□ -1.05
NEDD8-203ENST00000524927 RRP1P56182 461 aaKnown RBP8.48□□□□□ -1.05
NEDD8-203ENST00000524927 ZNF200P98182 395 aaPredicted RBP8.48□□□□□ -1.05
NEDD8-203ENST00000524927 COASYQ13057 564 aa8.48□□□□□ -1.05
NEDD8-203ENST00000524927 AUHQ13825 339 aaKnown RBP8.48□□□□□ -1.05
NEDD8-203ENST00000524927 EPC2Q52LR7 807 aa8.48□□□□□ -1.05
NEDD8-203ENST00000524927 C2orf27AQ580R0 203 aa8.48□□□□□ -1.05
NEDD8-203ENST00000524927 MSL3Q8N5Y2 521 aaKnown RBP8.48□□□□□ -1.05
NEDD8-203ENST00000524927 SPATC1LQ9H0A9 340 aa8.48□□□□□ -1.05
NEDD8-203ENST00000524927 FANCLQ9NW38 375 aa8.48□□□□□ -1.05
NEDD8-203ENST00000524927 ZNF451Q9Y4E5 1061 aa8.48□□□□□ -1.05
NEDD8-203ENST00000524927 PTPRSQ13332 1948 aa8.48□□□□□ -1.05
NEDD8-203ENST00000524927 CNOT1A5YKK6 2376 aaKnown RBP8.48□□□□□ -1.05
NEDD8-203ENST00000524927 ESYT3A0FGR9 886 aa8.47□□□□□ -1.05
NEDD8-203ENST00000524927 TMEM8BA6NDV4 472 aa8.47□□□□□ -1.05
NEDD8-203ENST00000524927 CHL1O00533 1208 aa8.47□□□□□ -1.05
NEDD8-203ENST00000524927 PPM1BO75688 479 aa8.47□□□□□ -1.05
NEDD8-203ENST00000524927 CBX7O95931 251 aa8.47□□□□□ -1.05
NEDD8-203ENST00000524927 CD247P20963 164 aa8.47□□□□□ -1.05
NEDD8-203ENST00000524927 ZEB1P37275 1124 aaPredicted RBP8.47□□□□□ -1.05
NEDD8-203ENST00000524927 ADAM15Q13444 863 aa8.47□□□□□ -1.05
NEDD8-203ENST00000524927 PICALMQ13492 652 aa8.47□□□□□ -1.05
NEDD8-203ENST00000524927 ANKRD39Q53RE8 183 aa8.47□□□□□ -1.05
NEDD8-203ENST00000524927 SFRP5Q5T4F7 317 aa8.47□□□□□ -1.05
NEDD8-203ENST00000524927 EGFLAMQ63HQ2 1017 aa8.47□□□□□ -1.05
NEDD8-203ENST00000524927 UNQ6494/PRO21346Q6UXR6 183 aa8.47□□□□□ -1.05
NEDD8-203ENST00000524927 TMCO2Q7Z6W1 182 aaPredicted RBP8.47□□□□□ -1.05
NEDD8-203ENST00000524927 HOMER1Q86YM7 354 aa8.47□□□□□ -1.05
NEDD8-203ENST00000524927 KREMEN2Q8NCW0 462 aa8.47□□□□□ -1.05
NEDD8-203ENST00000524927 LRRN4CLQ8ND94 238 aa8.47□□□□□ -1.05
NEDD8-203ENST00000524927 APPBP2Q92624 585 aa8.47□□□□□ -1.05
NEDD8-203ENST00000524927 BORCS6Q96GS4 357 aa8.47□□□□□ -1.05
NEDD8-203ENST00000524927 RTP3Q9BQQ7 232 aa8.47□□□□□ -1.05
NEDD8-203ENST00000524927 KLHL25Q9H0H3 589 aa8.47□□□□□ -1.05
NEDD8-203ENST00000524927 NCDNQ9UBB6 729 aa8.47□□□□□ -1.05
NEDD8-203ENST00000524927 SUSD2Q9UGT4 822 aa8.47□□□□□ -1.05
NEDD8-203ENST00000524927 SORCS3Q9UPU3 1222 aa8.47□□□□□ -1.05
NEDD8-203ENST00000524927 INSL6Q9Y581 213 aa8.47□□□□□ -1.05
NEDD8-203ENST00000524927 PCDHB12Q9Y5F1 795 aa8.47□□□□□ -1.05
NEDD8-203ENST00000524927 SCN5AQ14524 2016 aa8.47□□□□□ -1.05
NEDD8-203ENST00000524927 GRIN2DO15399 1336 aa8.47□□□□□ -1.05
NEDD8-203ENST00000524927 IGSF10Q6WRI0 2623 aa8.46□□□□□ -1.05
NEDD8-203ENST00000524927 TEP1Q99973 2627 aaKnown RBP8.46□□□□□ -1.05
NEDD8-203ENST00000524927 SRRM3A6NNA2 597 aaPredicted RBP8.46□□□□□ -1.06
NEDD8-203ENST00000524927 ENPP3O14638 875 aa8.46□□□□□ -1.06
NEDD8-203ENST00000524927 SLC30A4O14863 429 aa8.46□□□□□ -1.06
NEDD8-203ENST00000524927 CTAGE5O15320 804 aa8.46□□□□□ -1.06
NEDD8-203ENST00000524927 CBFA2T2O43439 604 aa8.46□□□□□ -1.06
NEDD8-203ENST00000524927 LRRN2O75325 713 aa8.46□□□□□ -1.06
NEDD8-203ENST00000524927 CDC45O75419 566 aa8.46□□□□□ -1.06
NEDD8-203ENST00000524927 ITGA4P13612 1032 aa8.46□□□□□ -1.06
NEDD8-203ENST00000524927 ADMP35318 185 aa8.46□□□□□ -1.06
NEDD8-203ENST00000524927 DEFB103AP81534 67 aa8.46□□□□□ -1.06
NEDD8-203ENST00000524927 ZNF792Q3KQV3 632 aa8.46□□□□□ -1.06
NEDD8-203ENST00000524927 CWF19L1Q69YN2 538 aaKnown RBP8.46□□□□□ -1.06
NEDD8-203ENST00000524927 OGFOD2Q6N063 350 aa8.46□□□□□ -1.06
NEDD8-203ENST00000524927 OGFOD3Q6PK18 319 aa8.46□□□□□ -1.06
NEDD8-203ENST00000524927 CXCL17Q6UXB2 119 aa8.46□□□□□ -1.06
NEDD8-203ENST00000524927 KSR2Q6VAB6 950 aa8.46□□□□□ -1.06
NEDD8-203ENST00000524927 DDX1Q92499 740 aaKnown RBP8.46□□□□□ -1.06
NEDD8-203ENST00000524927 PLEKHF1Q96S99 279 aa8.46□□□□□ -1.06
NEDD8-203ENST00000524927 LMAN2LQ9H0V9 348 aa8.46□□□□□ -1.06
NEDD8-203ENST00000524927 ALDH8A1Q9H2A2 487 aaPredicted RBP8.46□□□□□ -1.06
NEDD8-203ENST00000524927 INCENPQ9NQS7 918 aa8.46□□□□□ -1.06
NEDD8-203ENST00000524927 WHRNQ9P202 907 aa8.46□□□□□ -1.06
NEDD8-203ENST00000524927 CCDC39Q9UFE4 941 aa8.46□□□□□ -1.06
NEDD8-203ENST00000524927 GTF2IRD1Q9UHL9 959 aa8.46□□□□□ -1.06
NEDD8-203ENST00000524927 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.46□□□□□ -1.06
NEDD8-203ENST00000524927 USP15Q9Y4E8 981 aaPredicted RBP8.46□□□□□ -1.06
NEDD8-203ENST00000524927 ITPR1Q14643 2758 aa8.46□□□□□ -1.06
NEDD8-203ENST00000524927 ANKRD17O75179 2603 aaKnown RBP8.45□□□□□ -1.06
NEDD8-203ENST00000524927 ANKRD62A6NC57 917 aa8.45□□□□□ -1.06
NEDD8-203ENST00000524927 NOP56O00567 594 aaKnown RBP8.45□□□□□ -1.06
NEDD8-203ENST00000524927 EFCAB14O75071 495 aa8.45□□□□□ -1.06
NEDD8-203ENST00000524927 IQCF3P0C7M6 154 aa8.45□□□□□ -1.06
NEDD8-203ENST00000524927 PRDX5P30044 214 aa8.45□□□□□ -1.06
NEDD8-203ENST00000524927 NDUFV1P49821 464 aa8.45□□□□□ -1.06
NEDD8-203ENST00000524927 USP14P54578 494 aa8.45□□□□□ -1.06
NEDD8-203ENST00000524927 CYP27C1Q4G0S4 372 aa8.45□□□□□ -1.06
NEDD8-203ENST00000524927 TAF7LQ5H9L4 462 aa8.45□□□□□ -1.06
NEDD8-203ENST00000524927 ZNF662Q6ZS27 426 aa8.45□□□□□ -1.06
NEDD8-203ENST00000524927 CBLL1Q75N03 491 aa8.45□□□□□ -1.06
NEDD8-203ENST00000524927 ZAR1Q86SH2 424 aa8.45□□□□□ -1.06
NEDD8-203ENST00000524927 ADCY4Q8NFM4 1077 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms