RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 PHC1P78364 1004 aa2.57□□□□□ -2
CD44-212ENST00000524922 BMS1Q14692 1282 aaKnown RBP2.57□□□□□ -2
CD44-212ENST00000524922 ZNF174Q15697 407 aa2.57□□□□□ -2
CD44-212ENST00000524922 VPS72Q15906 364 aa2.57□□□□□ -2
CD44-212ENST00000524922 SEPT7Q16181 437 aaKnown RBP2.57□□□□□ -2
CD44-212ENST00000524922 TKFCQ3LXA3 575 aa2.57□□□□□ -2
CD44-212ENST00000524922 PLEKHG4Q58EX7 1191 aa2.57□□□□□ -2
CD44-212ENST00000524922 GPR158Q5T848 1215 aa2.57□□□□□ -2
CD44-212ENST00000524922 LRCH2Q5VUJ6 765 aa2.57□□□□□ -2
CD44-212ENST00000524922 Q6YL49 198 aa2.57□□□□□ -2
CD44-212ENST00000524922 TAS1R1Q7RTX1 841 aa2.57□□□□□ -2
CD44-212ENST00000524922 FAM9AQ8IZU1 332 aaPredicted RBP2.57□□□□□ -2
CD44-212ENST00000524922 NXPE1Q8N323 547 aa2.57□□□□□ -2
CD44-212ENST00000524922 C7orf31Q8N865 590 aa2.57□□□□□ -2
CD44-212ENST00000524922 SMC1BQ8NDV3 1235 aa2.57□□□□□ -2
CD44-212ENST00000524922 CHTF18Q8WVB6 975 aa2.57□□□□□ -2
CD44-212ENST00000524922 RPGRQ92834 1020 aaKnown RBP2.57□□□□□ -2
CD44-212ENST00000524922 MYEOVQ96EZ4 313 aa2.57□□□□□ -2
CD44-212ENST00000524922 ZNF764Q96H86 408 aaPredicted RBP2.57□□□□□ -2
CD44-212ENST00000524922 RNPC3Q96LT9 517 aaKnown RBP2.57□□□□□ -2
CD44-212ENST00000524922 CRAMP1Q96RY5 1269 aa2.57□□□□□ -2
CD44-212ENST00000524922 NOL10Q9BSC4 688 aaKnown RBP2.57□□□□□ -2
CD44-212ENST00000524922 TEX101Q9BY14 249 aa2.57□□□□□ -2
CD44-212ENST00000524922 TOR3AQ9H497 397 aa2.57□□□□□ -2
CD44-212ENST00000524922 CABP5Q9NP86 173 aa2.57□□□□□ -2
CD44-212ENST00000524922 PODXL2Q9NZ53 605 aa2.57□□□□□ -2
CD44-212ENST00000524922 MAGEC2Q9UBF1 373 aaPredicted RBP2.57□□□□□ -2
CD44-212ENST00000524922 PCDHB6Q9Y5E3 794 aa2.57□□□□□ -2
CD44-212ENST00000524922 ATP10AO60312 1499 aa2.57□□□□□ -2
CD44-212ENST00000524922 MLH3Q9UHC1 1453 aa2.57□□□□□ -2
CD44-212ENST00000524922 KDM5CP41229 1560 aa2.57□□□□□ -2
CD44-212ENST00000524922 STRCQ7RTU9 1775 aa2.56□□□□□ -2
CD44-212ENST00000524922 PRSS38A1L453 326 aa2.56□□□□□ -2
CD44-212ENST00000524922 ZNF185O15231 689 aa2.56□□□□□ -2
CD44-212ENST00000524922 DAPK3O43293 454 aa2.56□□□□□ -2
CD44-212ENST00000524922 DNAJC6O75061 913 aa2.56□□□□□ -2
CD44-212ENST00000524922 TMEM127O75204 238 aa2.56□□□□□ -2
CD44-212ENST00000524922 PCDH8O95206 1070 aa2.56□□□□□ -2
CD44-212ENST00000524922 ASMTLO95671 621 aa2.56□□□□□ -2
CD44-212ENST00000524922 APOBEC3AP31941 199 aaPredicted RBP2.56□□□□□ -2
CD44-212ENST00000524922 ZEB1P37275 1124 aaPredicted RBP2.56□□□□□ -2
CD44-212ENST00000524922 WNT3AP56704 352 aa2.56□□□□□ -2
CD44-212ENST00000524922 SCAPQ12770 1279 aa2.56□□□□□ -2
CD44-212ENST00000524922 FSTL1Q12841 308 aa2.56□□□□□ -2
CD44-212ENST00000524922 TRIM25Q14258 630 aaKnown RBP2.56□□□□□ -2
CD44-212ENST00000524922 PCBP1Q15365 356 aaKnown RBP eCLIP2.56□□□□□ -2
CD44-212ENST00000524922 BEAN1Q3B7T3 259 aa2.56□□□□□ -2
CD44-212ENST00000524922 CFAP100Q494V2 611 aa2.56□□□□□ -2
CD44-212ENST00000524922 KRT40Q6A162 431 aa2.56□□□□□ -2
CD44-212ENST00000524922 ZZZ3Q8IYH5 903 aa2.56□□□□□ -2
CD44-212ENST00000524922 FAM98AQ8NCA5 519 aaKnown RBP2.56□□□□□ -2
CD44-212ENST00000524922 CPT1CQ8TCG5 803 aa2.56□□□□□ -2
CD44-212ENST00000524922 PROKR1Q8TCW9 393 aa2.56□□□□□ -2
CD44-212ENST00000524922 NEU1Q99519 415 aa2.56□□□□□ -2
CD44-212ENST00000524922 ADAM2Q99965 735 aa2.56□□□□□ -2
CD44-212ENST00000524922 NDC1Q9BTX1 674 aa2.56□□□□□ -2
CD44-212ENST00000524922 SLC46A2Q9BY10 475 aa2.56□□□□□ -2
CD44-212ENST00000524922 PIF1Q9H611 641 aa2.56□□□□□ -2
CD44-212ENST00000524922 TOMM22Q9NS69 142 aa2.56□□□□□ -2
CD44-212ENST00000524922 USP36Q9P275 1121 aaKnown RBP2.56□□□□□ -2
CD44-212ENST00000524922 EVLQ9UI08 416 aaPredicted RBP2.56□□□□□ -2
CD44-212ENST00000524922 SORCS3Q9UPU3 1222 aa2.56□□□□□ -2
CD44-212ENST00000524922 CD2APQ9Y5K6 639 aa2.56□□□□□ -2
CD44-212ENST00000524922 PPP2R3BQ9Y5P8 575 aa2.56□□□□□ -2
CD44-212ENST00000524922 EPN1Q9Y6I3 576 aaPredicted RBP2.56□□□□□ -2
CD44-212ENST00000524922 MED14O60244 1454 aa2.56□□□□□ -2
CD44-212ENST00000524922 ZNF518AQ6AHZ1 1483 aa2.56□□□□□ -2
CD44-212ENST00000524922 CDK12Q9NYV4 1490 aaPredicted RBP2.56□□□□□ -2
CD44-212ENST00000524922 ZNF142P52746 1687 aaPredicted RBP2.56□□□□□ -2
CD44-212ENST00000524922 RICTORQ6R327 1708 aa2.56□□□□□ -2
CD44-212ENST00000524922 MROH2AA6NES4 1674 aa2.55□□□□□ -2
CD44-212ENST00000524922 SYNMO15061 1565 aa2.55□□□□□ -2
CD44-212ENST00000524922 SCAF4O95104 1147 aaKnown RBP2.55□□□□□ -2
CD44-212ENST00000524922 ABHD16AO95870 558 aa2.55□□□□□ -2
CD44-212ENST00000524922 GNAT2P19087 354 aa2.55□□□□□ -2
CD44-212ENST00000524922 RANGAP1P46060 587 aaPredicted RBP2.55□□□□□ -2
CD44-212ENST00000524922 MANFP55145 182 aaKnown RBP2.55□□□□□ -2
CD44-212ENST00000524922 UBE3CQ15386 1083 aa2.55□□□□□ -2
CD44-212ENST00000524922 TERF2Q15554 542 aa2.55□□□□□ -2
CD44-212ENST00000524922 MAN2A1Q16706 1144 aa2.55□□□□□ -2
CD44-212ENST00000524922 CCDC142Q17RM4 750 aa2.55□□□□□ -2
CD44-212ENST00000524922 LY6G5CQ5SRR4 150 aa2.55□□□□□ -2
CD44-212ENST00000524922 ANKS6Q68DC2 871 aa2.55□□□□□ -2
CD44-212ENST00000524922 TIGD7Q6NT04 549 aaPredicted RBP2.55□□□□□ -2
CD44-212ENST00000524922 DPY19L2P1Q6NXN4 242 aa2.55□□□□□ -2
CD44-212ENST00000524922 DRICH1Q6PGQ1 229 aaPredicted RBP2.55□□□□□ -2
CD44-212ENST00000524922 OLFML1Q6UWY5 402 aa2.55□□□□□ -2
CD44-212ENST00000524922 LRRTM3Q86VH5 581 aa2.55□□□□□ -2
CD44-212ENST00000524922 XYLT1Q86Y38 959 aa2.55□□□□□ -2
CD44-212ENST00000524922 ARHGEF19Q8IW93 802 aa2.55□□□□□ -2
CD44-212ENST00000524922 CDYL2Q8N8U2 506 aa2.55□□□□□ -2
CD44-212ENST00000524922 ZNF610Q8N9Z0 462 aa2.55□□□□□ -2
CD44-212ENST00000524922 LINC00476Q8WZB0 136 aa2.55□□□□□ -2
CD44-212ENST00000524922 HIST1H2AHQ96KK5 128 aa2.55□□□□□ -2
CD44-212ENST00000524922 UIMC1Q96RL1 719 aa2.55□□□□□ -2
CD44-212ENST00000524922 HIST1H2AJQ99878 128 aa2.55□□□□□ -2
CD44-212ENST00000524922 R3HDMLQ9H3Y0 253 aa2.55□□□□□ -2
CD44-212ENST00000524922 SERHL2Q9H4I8 314 aa2.55□□□□□ -2
CD44-212ENST00000524922 SPTLC3Q9NUV7 552 aa2.55□□□□□ -2
CD44-212ENST00000524922 THG1LQ9NWX6 298 aaKnown RBP2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms