RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 SMAD3P84022 425 aaKnown RBP4.14□□□□□ -1.75
CSDE1-208ENST00000524652 SQSTM1Q13501 440 aa4.14□□□□□ -1.75
CSDE1-208ENST00000524652 CNGB1Q14028 1251 aaPredicted RBP4.14□□□□□ -1.75
CSDE1-208ENST00000524652 MYBPC3Q14896 1274 aa4.14□□□□□ -1.75
CSDE1-208ENST00000524652 ACAP1Q15027 740 aa4.14□□□□□ -1.75
CSDE1-208ENST00000524652 ELAVL1Q15717 326 aaKnown RBP4.14□□□□□ -1.75
CSDE1-208ENST00000524652 KRT40Q6A162 431 aa4.14□□□□□ -1.75
CSDE1-208ENST00000524652 Q6ZRM9 215 aa4.14□□□□□ -1.75
CSDE1-208ENST00000524652 HTR3DQ70Z44 454 aa4.14□□□□□ -1.75
CSDE1-208ENST00000524652 UBE2R2Q712K3 238 aaPredicted RBP4.14□□□□□ -1.75
CSDE1-208ENST00000524652 KANSL1Q7Z3B3 1105 aa4.14□□□□□ -1.75
CSDE1-208ENST00000524652 ZZZ3Q8IYH5 903 aa4.14□□□□□ -1.75
CSDE1-208ENST00000524652 C7orf31Q8N865 590 aa4.14□□□□□ -1.75
CSDE1-208ENST00000524652 LARP4BQ92615 738 aaKnown RBP4.14□□□□□ -1.75
CSDE1-208ENST00000524652 DNAJC2Q99543 621 aaKnown RBP4.14□□□□□ -1.75
CSDE1-208ENST00000524652 ORAI3Q9BRQ5 295 aa4.14□□□□□ -1.75
CSDE1-208ENST00000524652 INTS7Q9NVH2 962 aaKnown RBP4.14□□□□□ -1.75
CSDE1-208ENST00000524652 RCAN3Q9UKA8 241 aa4.14□□□□□ -1.75
CSDE1-208ENST00000524652 SYNPO2Q9UMS6 1093 aa4.14□□□□□ -1.75
CSDE1-208ENST00000524652 SPO11Q9Y5K1 396 aa4.14□□□□□ -1.75
CSDE1-208ENST00000524652 RPGRIP1LQ68CZ1 1315 aa4.14□□□□□ -1.75
CSDE1-208ENST00000524652 USP32Q8NFA0 1604 aa4.13□□□□□ -1.75
CSDE1-208ENST00000524652 RALGAPBQ86X10 1494 aa4.13□□□□□ -1.75
CSDE1-208ENST00000524652 UBE2QL1A1L167 161 aa4.13□□□□□ -1.75
CSDE1-208ENST00000524652 RFPL3O75679 317 aa4.13□□□□□ -1.75
CSDE1-208ENST00000524652 IPO13O94829 963 aaKnown RBP4.13□□□□□ -1.75
CSDE1-208ENST00000524652 PTGS2P35354 604 aa4.13□□□□□ -1.75
CSDE1-208ENST00000524652 SCNN1GP51170 649 aa4.13□□□□□ -1.75
CSDE1-208ENST00000524652 ADCY2Q08462 1091 aa4.13□□□□□ -1.75
CSDE1-208ENST00000524652 TOB2Q14106 344 aaPredicted RBP4.13□□□□□ -1.75
CSDE1-208ENST00000524652 BMS1Q14692 1282 aaKnown RBP4.13□□□□□ -1.75
CSDE1-208ENST00000524652 FKBP15Q5T1M5 1219 aa4.13□□□□□ -1.75
CSDE1-208ENST00000524652 CREB3L3Q68CJ9 461 aa4.13□□□□□ -1.75
CSDE1-208ENST00000524652 ESRP1Q6NXG1 681 aaKnown RBP4.13□□□□□ -1.75
CSDE1-208ENST00000524652 MRGPRGQ86SM5 289 aa4.13□□□□□ -1.75
CSDE1-208ENST00000524652 GSPT2Q8IYD1 628 aaKnown RBP4.13□□□□□ -1.75
CSDE1-208ENST00000524652 SYNPOQ8N3V7 929 aa4.13□□□□□ -1.75
CSDE1-208ENST00000524652 SREK1Q8WXA9 508 aaKnown RBP4.13□□□□□ -1.75
CSDE1-208ENST00000524652 CLIP3Q96DZ5 547 aa4.13□□□□□ -1.75
CSDE1-208ENST00000524652 MRFAP1L1Q96HT8 127 aa4.13□□□□□ -1.75
CSDE1-208ENST00000524652 GPR87Q9BY21 358 aa4.13□□□□□ -1.75
CSDE1-208ENST00000524652 OSBPL6Q9BZF3 934 aa4.13□□□□□ -1.75
CSDE1-208ENST00000524652 TMEM260Q9NX78 707 aa4.13□□□□□ -1.75
CSDE1-208ENST00000524652 MAGEC2Q9UBF1 373 aaPredicted RBP4.13□□□□□ -1.75
CSDE1-208ENST00000524652 DNAI1Q9UI46 699 aa4.13□□□□□ -1.75
CSDE1-208ENST00000524652 REXO2Q9Y3B8 237 aaKnown RBP4.13□□□□□ -1.75
CSDE1-208ENST00000524652 ZNF335Q9H4Z2 1342 aaPredicted RBP4.13□□□□□ -1.75
CSDE1-208ENST00000524652 TONSLQ96HA7 1378 aa4.13□□□□□ -1.75
CSDE1-208ENST00000524652 FMN2Q9NZ56 1722 aa4.12□□□□□ -1.75
CSDE1-208ENST00000524652 A0A0A6YYJ9 748 aa4.12□□□□□ -1.75
CSDE1-208ENST00000524652 GOLGA6L6A8MZA4 724 aa4.12□□□□□ -1.75
CSDE1-208ENST00000524652 OPHN1O60890 802 aa4.12□□□□□ -1.75
CSDE1-208ENST00000524652 SLC9A1P19634 815 aa4.12□□□□□ -1.75
CSDE1-208ENST00000524652 KIR2DL3P43628 341 aa4.12□□□□□ -1.75
CSDE1-208ENST00000524652 RABGGTBP53611 331 aa4.12□□□□□ -1.75
CSDE1-208ENST00000524652 SLC25A3Q00325 362 aa4.12□□□□□ -1.75
CSDE1-208ENST00000524652 MAN2A1Q16706 1144 aa4.12□□□□□ -1.75
CSDE1-208ENST00000524652 CDCA2Q69YH5 1023 aaPredicted RBP4.12□□□□□ -1.75
CSDE1-208ENST00000524652 KIAA1841Q6NSI8 718 aa4.12□□□□□ -1.75
CSDE1-208ENST00000524652 TIGD7Q6NT04 549 aaPredicted RBP4.12□□□□□ -1.75
CSDE1-208ENST00000524652 PCSK4Q6UW60 755 aa4.12□□□□□ -1.75
CSDE1-208ENST00000524652 ULK2Q8IYT8 1036 aa4.12□□□□□ -1.75
CSDE1-208ENST00000524652 CMTM4Q8IZR5 234 aa4.12□□□□□ -1.75
CSDE1-208ENST00000524652 MDGA1Q8NFP4 955 aa4.12□□□□□ -1.75
CSDE1-208ENST00000524652 SH3TC2Q8TF17 1288 aa4.12□□□□□ -1.75
CSDE1-208ENST00000524652 ZNF512Q96ME7 567 aaPredicted RBP4.12□□□□□ -1.75
CSDE1-208ENST00000524652 ELF4Q99607 663 aaPredicted RBP4.12□□□□□ -1.75
CSDE1-208ENST00000524652 MTG2Q9H4K7 406 aa4.12□□□□□ -1.75
CSDE1-208ENST00000524652 SLC2A4RGQ9NR83 387 aa4.12□□□□□ -1.75
CSDE1-208ENST00000524652 MYOM1P52179 1685 aa4.12□□□□□ -1.75
CSDE1-208ENST00000524652 GPRASP1Q5JY77 1395 aa4.12□□□□□ -1.75
CSDE1-208ENST00000524652 PLEKHH1Q9ULM0 1364 aa4.12□□□□□ -1.75
CSDE1-208ENST00000524652 TECPR2O15040 1411 aa4.12□□□□□ -1.75
CSDE1-208ENST00000524652 YTHDC2Q9H6S0 1430 aaKnown RBP4.12□□□□□ -1.75
CSDE1-208ENST00000524652 LRRC7Q96NW7 1537 aa4.11□□□□□ -1.75
CSDE1-208ENST00000524652 DLC1Q96QB1 1528 aa4.11□□□□□ -1.75
CSDE1-208ENST00000524652 ADGRB2O60241 1585 aa4.11□□□□□ -1.75
CSDE1-208ENST00000524652 TOPAZ1Q8N9V7 1692 aa4.11□□□□□ -1.75
CSDE1-208ENST00000524652 KLRG2A4D1S0 409 aaPredicted RBP4.11□□□□□ -1.75
CSDE1-208ENST00000524652 NRP1O14786 923 aa4.11□□□□□ -1.75
CSDE1-208ENST00000524652 MFAP3LO75121 409 aa4.11□□□□□ -1.75
CSDE1-208ENST00000524652 PRPF6O94906 941 aaKnown RBP4.11□□□□□ -1.75
CSDE1-208ENST00000524652 FSBPO95073 299 aa4.11□□□□□ -1.75
CSDE1-208ENST00000524652 HNRNPLP14866 589 aaKnown RBP eCLIP4.11□□□□□ -1.755e-8■□□□□ 8.7
CSDE1-208ENST00000524652 SDSP20132 328 aa4.11□□□□□ -1.75
CSDE1-208ENST00000524652 PABPC4Q13310 644 aaKnown RBP eCLIP4.11□□□□□ -1.75
CSDE1-208ENST00000524652 SPIDRQ14159 915 aa4.11□□□□□ -1.75
CSDE1-208ENST00000524652 CFAP100Q494V2 611 aa4.11□□□□□ -1.75
CSDE1-208ENST00000524652 DCAF17Q5H9S7 520 aaPredicted RBP4.11□□□□□ -1.75
CSDE1-208ENST00000524652 NAIF1Q69YI7 327 aaPredicted RBP4.11□□□□□ -1.75
CSDE1-208ENST00000524652 ZNF627Q7L945 461 aa4.11□□□□□ -1.75
CSDE1-208ENST00000524652 KIF18BQ86Y91 864 aa4.11□□□□□ -1.75
CSDE1-208ENST00000524652 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.11□□□□□ -1.75
CSDE1-208ENST00000524652 PPP1R14CQ8TAE6 165 aa4.11□□□□□ -1.75
CSDE1-208ENST00000524652 ARL8AQ96BM9 186 aa4.11□□□□□ -1.75
CSDE1-208ENST00000524652 HIST1H2AHQ96KK5 128 aa4.11□□□□□ -1.75
CSDE1-208ENST00000524652 HIST1H2AJQ99878 128 aa4.11□□□□□ -1.75
CSDE1-208ENST00000524652 POFUT1Q9H488 388 aa4.11□□□□□ -1.75
CSDE1-208ENST00000524652 GPRC5BQ9NZH0 403 aa4.11□□□□□ -1.75
CSDE1-208ENST00000524652 USP36Q9P275 1121 aaKnown RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms