RNA–Protein interactions for RNA: ENST00000524454.1

VPS11-201, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 626 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-201ENST00000524454 FRMD5Q7Z6J6 570 aa7.75□□□□□ -1.17
VPS11-201ENST00000524454 SLC9A9Q8IVB4 645 aa7.75□□□□□ -1.17
VPS11-201ENST00000524454 FMNL3Q8IVF7 1028 aa7.75□□□□□ -1.17
VPS11-201ENST00000524454 C12orf56Q8IXR9 622 aa7.75□□□□□ -1.17
VPS11-201ENST00000524454 ZNF397Q8NF99 534 aaPredicted RBP7.75□□□□□ -1.17
VPS11-201ENST00000524454 SCFD1Q8WVM8 642 aa7.75□□□□□ -1.17
VPS11-201ENST00000524454 SEPT1Q8WYJ6 367 aa7.75□□□□□ -1.17
VPS11-201ENST00000524454 DRC1Q96MC2 740 aa7.75□□□□□ -1.17
VPS11-201ENST00000524454 ZNF830Q96NB3 372 aaPredicted RBP7.75□□□□□ -1.17
VPS11-201ENST00000524454 TTYH3Q9C0H2 523 aa7.75□□□□□ -1.17
VPS11-201ENST00000524454 BHMT2Q9H2M3 363 aa7.75□□□□□ -1.17
VPS11-201ENST00000524454 SEMA6BQ9H3T3 888 aa7.75□□□□□ -1.17
VPS11-201ENST00000524454 UNC45AQ9H3U1 944 aa7.75□□□□□ -1.17
VPS11-201ENST00000524454 SLC39A2Q9NP94 309 aa7.75□□□□□ -1.17
VPS11-201ENST00000524454 TYW1Q9NV66 732 aaKnown RBP7.75□□□□□ -1.17
VPS11-201ENST00000524454 ZNHIT6Q9NWK9 470 aaKnown RBP7.75□□□□□ -1.17
VPS11-201ENST00000524454 LARSQ9P2J5 1176 aaKnown RBP7.75□□□□□ -1.17
VPS11-201ENST00000524454 ZNF215Q9UL58 517 aaPredicted RBP7.75□□□□□ -1.17
VPS11-201ENST00000524454 CAPN11Q9UMQ6 739 aa7.75□□□□□ -1.17
VPS11-201ENST00000524454 LAMA3Q16787 3333 aa7.75□□□□□ -1.17
VPS11-201ENST00000524454 GTPBP10A4D1E9 387 aaKnown RBP7.74□□□□□ -1.17
VPS11-201ENST00000524454 ARHGEF35A5YM69 484 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 TRIM49BA6NDI0 452 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 H0YCG3 227 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 BACH1O14867 736 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 CETN3O15182 167 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 MAPK13O15264 365 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 NBNO60934 754 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 LGR5O75473 907 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 SSBP05455 408 aaKnown RBP eCLIP7.74□□□□□ -1.17
VPS11-201ENST00000524454 CFHP08603 1231 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 MYOGP15173 224 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 ANXA13P27216 316 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 HOXC8P31273 242 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 MTIF2P46199 727 aaKnown RBP7.74□□□□□ -1.17
VPS11-201ENST00000524454 PSMC5P62195 406 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 ZBED6P86452 979 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 UBXN1Q04323 297 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 PPFIA1Q13136 1202 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 PLCB4Q15147 1175 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 PTPN14Q15678 1187 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 GRIK4Q16099 956 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 VWA3BQ502W6 1294 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 MIIPQ5JXC2 388 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 RASIP1Q5U651 963 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 E4F1Q66K89 784 aaPredicted RBP7.74□□□□□ -1.17
VPS11-201ENST00000524454 TRAF7Q6Q0C0 670 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 CYP26C1Q6V0L0 522 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 SERINC5Q86VE9 423 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 CCDC60Q8IWA6 550 aaPredicted RBP7.74□□□□□ -1.17
VPS11-201ENST00000524454 TRIM59Q8IWR1 403 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 CCDC170Q8IYT3 715 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 TXLNBQ8N3L3 684 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 CCDC155Q8N6L0 562 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 CAGE1Q8TC20 777 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 AFAP1L1Q8TED9 768 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 HERVK_113Q902F9 699 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 SYN2Q92777 582 aaPredicted RBP7.74□□□□□ -1.17
VPS11-201ENST00000524454 DYDC2Q96IM9 177 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 STRA6Q9BX79 667 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 TTYH1Q9H313 450 aaPredicted RBP7.74□□□□□ -1.17
VPS11-201ENST00000524454 NDST4Q9H3R1 872 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 ABHD10Q9NUJ1 306 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 ERAP1Q9NZ08 941 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 MYO1AQ9UBC5 1043 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 FBXL5Q9UKA1 691 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 MYO6Q9UM54 1294 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 YBX2Q9Y2T7 364 aaKnown RBP7.74□□□□□ -1.17
VPS11-201ENST00000524454 LUC7L2Q9Y383 392 aaKnown RBP7.74□□□□□ -1.17
VPS11-201ENST00000524454 PCDHA10Q9Y5I2 948 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 MICAL3Q7RTP6 2002 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 EVPLQ92817 2033 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 PHLPP2Q6ZVD8 1323 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 EMSYQ7Z589 1322 aa7.74□□□□□ -1.17
VPS11-201ENST00000524454 HSFX4A0A1B0GTS1 333 aaPredicted RBP7.73□□□□□ -1.17
VPS11-201ENST00000524454 HSFX3A0A1B0GWH4 333 aaPredicted RBP7.73□□□□□ -1.17
VPS11-201ENST00000524454 TEX33O43247 280 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 FAM13AO94988 1023 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 PSAPP07602 524 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 CCDC175P0C221 793 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 INSRRP14616 1297 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 CD46P15529 392 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 RFX1P22670 979 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 RARRES1P49788 294 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 STAT5BP51692 787 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 ADAM17P78536 824 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 DEFB103AP81534 67 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 SMAD3P84022 425 aaKnown RBP7.73□□□□□ -1.17
VPS11-201ENST00000524454 CYP4A11Q02928 519 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 TBC1D8BQ0IIM8 1120 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 TMEM62Q0P6H9 643 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 SYCP1Q15431 976 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 UGCGQ16739 394 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 MARCH8Q5T0T0 291 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 ZNF697Q5TEC3 545 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 SWSAP1Q6NVH7 229 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 ABHD15Q6UXT9 468 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 OTUD6AQ7L8S5 288 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 HS2ST1Q7LGA3 356 aa7.73□□□□□ -1.17
VPS11-201ENST00000524454 TPH2Q8IWU9 490 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms