RNA–Protein interactions for RNA: ENST00000524288.1

SKP1-213, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 1 (best)

Gene SKP1, Length 732 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-213ENST00000524288 SLC39A13Q96H72 371 aa7.4□□□□□ -1.22
SKP1-213ENST00000524288 POLR3BQ9NW08 1133 aaPredicted RBP7.4□□□□□ -1.22
SKP1-213ENST00000524288 TSC22D4Q9Y3Q8 395 aa7.4□□□□□ -1.22
SKP1-213ENST00000524288 PCDHA13Q9Y5I0 950 aa7.4□□□□□ -1.22
SKP1-213ENST00000524288 TPP1O14773 563 aa7.39□□□□□ -1.23
SKP1-213ENST00000524288 PMM2O15305 246 aa7.39□□□□□ -1.23
SKP1-213ENST00000524288 MAFGO15525 162 aa7.39□□□□□ -1.23
SKP1-213ENST00000524288 GPR42O15529 346 aa7.39□□□□□ -1.23
SKP1-213ENST00000524288 HNRNPLP14866 589 aaKnown RBP eCLIP7.39□□□□□ -1.23
SKP1-213ENST00000524288 MCAMP43121 646 aa7.39□□□□□ -1.23
SKP1-213ENST00000524288 CD69Q07108 199 aa7.39□□□□□ -1.23
SKP1-213ENST00000524288 PPP3CAQ08209 521 aa7.39□□□□□ -1.23
SKP1-213ENST00000524288 SAFBQ15424 915 aaKnown RBP eCLIP7.39□□□□□ -1.23
SKP1-213ENST00000524288 CCDC149Q6ZUS6 474 aa7.39□□□□□ -1.23
SKP1-213ENST00000524288 COL23A1Q86Y22 540 aaPredicted RBP7.39□□□□□ -1.23
SKP1-213ENST00000524288 DENND1CQ8IV53 801 aa7.39□□□□□ -1.23
SKP1-213ENST00000524288 GLB1L2Q8IW92 636 aa7.39□□□□□ -1.23
SKP1-213ENST00000524288 IFNL2Q8IZJ0 200 aa7.39□□□□□ -1.23
SKP1-213ENST00000524288 PRR18Q8N4B5 295 aa7.39□□□□□ -1.23
SKP1-213ENST00000524288 FAM156AQ8NDB6 213 aa7.39□□□□□ -1.23
SKP1-213ENST00000524288 SVIPQ8NHG7 77 aa7.39□□□□□ -1.23
SKP1-213ENST00000524288 MORC4Q8TE76 937 aa7.39□□□□□ -1.23
SKP1-213ENST00000524288 KATNBL1Q9H079 304 aa7.39□□□□□ -1.23
SKP1-213ENST00000524288 TMPRSS5Q9H3S3 457 aa7.39□□□□□ -1.23
SKP1-213ENST00000524288 GREM2Q9H772 168 aa7.39□□□□□ -1.23
SKP1-213ENST00000524288 SCOCQ9UIL1 159 aa7.39□□□□□ -1.23
SKP1-213ENST00000524288 ST6GALNAC2Q9UJ37 374 aa7.39□□□□□ -1.23
SKP1-213ENST00000524288 PCDHGB6Q9Y5F9 930 aa7.39□□□□□ -1.23
SKP1-213ENST00000524288 H0Y858 1186 aa7.38□□□□□ -1.23
SKP1-213ENST00000524288 MATN3O15232 486 aa7.38□□□□□ -1.23
SKP1-213ENST00000524288 NRP2O60462 931 aa7.38□□□□□ -1.23
SKP1-213ENST00000524288 CUTAO60888 179 aa7.38□□□□□ -1.23
SKP1-213ENST00000524288 TMEM127O75204 238 aa7.38□□□□□ -1.23
SKP1-213ENST00000524288 SEC24DO94855 1032 aaPredicted RBP7.38□□□□□ -1.23
SKP1-213ENST00000524288 UBXN7O94888 489 aa7.38□□□□□ -1.23
SKP1-213ENST00000524288 IFIT2P09913 472 aaKnown RBP7.38□□□□□ -1.23
SKP1-213ENST00000524288 GPR15P49685 360 aa7.38□□□□□ -1.23
SKP1-213ENST00000524288 KCNQ1P51787 676 aa7.38□□□□□ -1.23
SKP1-213ENST00000524288 NRG3P56975 720 aa7.38□□□□□ -1.23
SKP1-213ENST00000524288 MAP3K12Q12852 859 aa7.38□□□□□ -1.23
SKP1-213ENST00000524288 OS9Q13438 667 aaPredicted RBP7.38□□□□□ -1.23
SKP1-213ENST00000524288 PICALMQ13492 652 aa7.38□□□□□ -1.23
SKP1-213ENST00000524288 CYB5RLQ6IPT4 315 aa7.38□□□□□ -1.23
SKP1-213ENST00000524288 DPP8Q6V1X1 898 aaPredicted RBP7.38□□□□□ -1.23
SKP1-213ENST00000524288 BCL6BQ8N143 479 aaPredicted RBP7.38□□□□□ -1.23
SKP1-213ENST00000524288 FAM193BQ96PV7 902 aaPredicted RBP7.38□□□□□ -1.23
SKP1-213ENST00000524288 PCGF6Q9BYE7 350 aa7.38□□□□□ -1.23
SKP1-213ENST00000524288 B3GNT5Q9BYG0 378 aa7.38□□□□□ -1.23
SKP1-213ENST00000524288 MEGF9Q9H1U4 602 aa7.38□□□□□ -1.23
SKP1-213ENST00000524288 CD248Q9HCU0 757 aa7.38□□□□□ -1.23
SKP1-213ENST00000524288 SLC4A7Q9Y6M7 1214 aa7.38□□□□□ -1.23
SKP1-213ENST00000524288 PATE3B3GLJ2 98 aa7.37□□□□□ -1.23
SKP1-213ENST00000524288 PRAMEF4O60810 478 aa7.37□□□□□ -1.23
SKP1-213ENST00000524288 RHCEP18577 417 aa7.37□□□□□ -1.23
SKP1-213ENST00000524288 ADSLP30566 484 aaPredicted RBP7.37□□□□□ -1.23
SKP1-213ENST00000524288 CSF2RBP32927 897 aa7.37□□□□□ -1.23
SKP1-213ENST00000524288 RHDQ02161 417 aa7.37□□□□□ -1.23
SKP1-213ENST00000524288 ICAM4Q14773 271 aa7.37□□□□□ -1.23
SKP1-213ENST00000524288 GORABQ5T7V8 394 aa7.37□□□□□ -1.23
SKP1-213ENST00000524288 KLHDC10Q6PID8 442 aa7.37□□□□□ -1.23
SKP1-213ENST00000524288 TTC17Q96AE7 1141 aa7.37□□□□□ -1.23
SKP1-213ENST00000524288 C1GALT1C1Q96EU7 318 aa7.37□□□□□ -1.23
SKP1-213ENST00000524288 CGRRF1Q99675 332 aa7.37□□□□□ -1.23
SKP1-213ENST00000524288 MYH16Q9H6N6 1097 aa7.37□□□□□ -1.23
SKP1-213ENST00000524288 FAM204AQ9H8W3 233 aa7.37□□□□□ -1.23
SKP1-213ENST00000524288 SAE1Q9UBE0 346 aaPredicted RBP7.37□□□□□ -1.23
SKP1-213ENST00000524288 PTPN22Q9Y2R2 807 aa7.37□□□□□ -1.23
SKP1-213ENST00000524288 LOC102724159A0A0B4J2E5 919 aa7.36□□□□□ -1.23
SKP1-213ENST00000524288 A0A0G2JNJ9 132 aa7.36□□□□□ -1.23
SKP1-213ENST00000524288 PLEKHD1A6NEE1 506 aa7.36□□□□□ -1.23
SKP1-213ENST00000524288 LRRC14BA6NHZ5 514 aa7.36□□□□□ -1.23
SKP1-213ENST00000524288 B3GALT2O43825 422 aa7.36□□□□□ -1.23
SKP1-213ENST00000524288 AKR1B10O60218 316 aa7.36□□□□□ -1.23
SKP1-213ENST00000524288 TUSC2O75896 110 aa7.36□□□□□ -1.23
SKP1-213ENST00000524288 CNOT4O95628 575 aaKnown RBP7.36□□□□□ -1.23
SKP1-213ENST00000524288 LY86O95711 162 aa7.36□□□□□ -1.23
SKP1-213ENST00000524288 LDHAP00338 332 aaKnown RBP7.36□□□□□ -1.23
SKP1-213ENST00000524288 SELENOPP49908 381 aa7.36□□□□□ -1.23
SKP1-213ENST00000524288 USP10Q14694 798 aaKnown RBP7.36□□□□□ -1.23
SKP1-213ENST00000524288 SEPT2Q15019 361 aa7.36□□□□□ -1.23
SKP1-213ENST00000524288 PWP2Q15269 919 aaKnown RBP7.36□□□□□ -1.23
SKP1-213ENST00000524288 TMEM200BQ69YZ2 307 aa7.36□□□□□ -1.23
SKP1-213ENST00000524288 ABHD15Q6UXT9 468 aa7.36□□□□□ -1.23
SKP1-213ENST00000524288 MIGA2Q7L4E1 593 aa7.36□□□□□ -1.23
SKP1-213ENST00000524288 CHST15Q7LFX5 561 aaPredicted RBP7.36□□□□□ -1.23
SKP1-213ENST00000524288 RHOT1Q8IXI2 618 aa7.36□□□□□ -1.23
SKP1-213ENST00000524288 HDAC10Q969S8 669 aa7.36□□□□□ -1.23
SKP1-213ENST00000524288 LRFN3Q9BTN0 628 aa7.36□□□□□ -1.23
SKP1-213ENST00000524288 APOL5Q9BWW9 433 aa7.36□□□□□ -1.23
SKP1-213ENST00000524288 HAPLN2Q9GZV7 340 aa7.36□□□□□ -1.23
SKP1-213ENST00000524288 KLC2Q9H0B6 622 aa7.36□□□□□ -1.23
SKP1-213ENST00000524288 DDX21Q9NR30 783 aaKnown RBP eCLIP7.36□□□□□ -1.23
SKP1-213ENST00000524288 RBM12Q9NTZ6 932 aaKnown RBP7.36□□□□□ -1.23
SKP1-213ENST00000524288 Q9UFV3 132 aa7.36□□□□□ -1.23
SKP1-213ENST00000524288 H3BML4 177 aa7.35□□□□□ -1.23
SKP1-213ENST00000524288 HTR1BP28222 390 aa7.35□□□□□ -1.23
SKP1-213ENST00000524288 POLD1P28340 1107 aa7.35□□□□□ -1.23
SKP1-213ENST00000524288 KIAA0753Q2KHM9 967 aa7.35□□□□□ -1.23
SKP1-213ENST00000524288 ZNF568Q3ZCX4 644 aa7.35□□□□□ -1.23
SKP1-213ENST00000524288 CCDC157Q569K6 752 aa7.35□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms