RNA–Protein interactions for RNA: ENST00000524277.1

SPARC-206, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 2

Gene SPARC, Length 505 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-206ENST00000524277 SSBP05455 408 aaKnown RBP eCLIP13.12□□□□□ -0.31
SPARC-206ENST00000524277 MLH1P40692 756 aa13.12□□□□□ -0.31
SPARC-206ENST00000524277 SCNN1GP51170 649 aa13.12□□□□□ -0.31
SPARC-206ENST00000524277 TCF15Q12870 199 aa13.12□□□□□ -0.31
SPARC-206ENST00000524277 USP41Q3LFD5 358 aa13.12□□□□□ -0.31
SPARC-206ENST00000524277 PIGOQ8TEQ8 1089 aa13.12□□□□□ -0.31
SPARC-206ENST00000524277 NXPE3Q969Y0 559 aa13.12□□□□□ -0.31
SPARC-206ENST00000524277 POLR3FQ9H1D9 316 aaPredicted RBP13.12□□□□□ -0.31
SPARC-206ENST00000524277 RNF39Q9H2S5 420 aa13.12□□□□□ -0.31
SPARC-206ENST00000524277 FOXP1Q9H334 677 aaPredicted RBP13.12□□□□□ -0.31
SPARC-206ENST00000524277 CHST7Q9NS84 486 aa13.12□□□□□ -0.31
SPARC-206ENST00000524277 MARCH5Q9NX47 278 aa13.12□□□□□ -0.31
SPARC-206ENST00000524277 CDH22Q9UJ99 828 aa13.12□□□□□ -0.31
SPARC-206ENST00000524277 LIMCH1Q9UPQ0 1083 aa13.12□□□□□ -0.31
SPARC-206ENST00000524277 MYO10Q9HD67 2058 aa13.12□□□□□ -0.31
SPARC-206ENST00000524277 LRRIQ4A6NIV6 560 aa13.11□□□□□ -0.31
SPARC-206ENST00000524277 C2CD2LO14523 706 aa13.11□□□□□ -0.31
SPARC-206ENST00000524277 N4BP3O15049 544 aa13.11□□□□□ -0.31
SPARC-206ENST00000524277 TEX28O15482 410 aa13.11□□□□□ -0.31
SPARC-206ENST00000524277 GALR2O43603 387 aaPredicted RBP13.11□□□□□ -0.31
SPARC-206ENST00000524277 USO1O60763 962 aaKnown RBP13.11□□□□□ -0.31
SPARC-206ENST00000524277 LARGE1O95461 756 aa13.11□□□□□ -0.31
SPARC-206ENST00000524277 WEE2P0C1S8 567 aa13.11□□□□□ -0.31
SPARC-206ENST00000524277 SPATA31C1P0DKV0 1188 aa13.11□□□□□ -0.31
SPARC-206ENST00000524277 ATP2B1P20020 1258 aa13.11□□□□□ -0.31
SPARC-206ENST00000524277 RPA1P27694 616 aa13.11□□□□□ -0.31
SPARC-206ENST00000524277 TRAPPC10P48553 1259 aa13.11□□□□□ -0.31
SPARC-206ENST00000524277 CLCN5P51795 746 aa13.11□□□□□ -0.31
SPARC-206ENST00000524277 VCPP55072 806 aaKnown RBP13.11□□□□□ -0.31
SPARC-206ENST00000524277 HMGN5P82970 282 aaKnown RBP13.11□□□□□ -0.31
SPARC-206ENST00000524277 TDGQ13569 410 aa13.11□□□□□ -0.31
SPARC-206ENST00000524277 PPP2R5AQ15172 486 aa13.11□□□□□ -0.31
SPARC-206ENST00000524277 HAUS3Q68CZ6 603 aa13.11□□□□□ -0.31
SPARC-206ENST00000524277 CDCA2Q69YH5 1023 aaPredicted RBP13.11□□□□□ -0.31
SPARC-206ENST00000524277 CATSPER3Q86XQ3 398 aa13.11□□□□□ -0.31
SPARC-206ENST00000524277 ZFP42Q96MM3 310 aa13.11□□□□□ -0.31
SPARC-206ENST00000524277 MFSD1Q9H3U5 465 aa13.11□□□□□ -0.31
SPARC-206ENST00000524277 FZD8Q9H461 694 aa13.11□□□□□ -0.31
SPARC-206ENST00000524277 WDR6Q9NNW5 1121 aaKnown RBP13.11□□□□□ -0.31
SPARC-206ENST00000524277 MAN1C1Q9NR34 630 aa13.11□□□□□ -0.31
SPARC-206ENST00000524277 MIOSQ9NXC5 875 aa13.11□□□□□ -0.31
SPARC-206ENST00000524277 ZDHHC7Q9NXF8 308 aa13.11□□□□□ -0.31
SPARC-206ENST00000524277 PARP2Q9UGN5 583 aa13.11□□□□□ -0.31
SPARC-206ENST00000524277 ADAM28Q9UKQ2 775 aa13.11□□□□□ -0.31
SPARC-206ENST00000524277 HES2Q9Y543 173 aa13.11□□□□□ -0.31
SPARC-206ENST00000524277 CCDC195A0A1B0GUA6 201 aa13.1□□□□□ -0.31
SPARC-206ENST00000524277 POTEMA6NI47 508 aa13.1□□□□□ -0.31
SPARC-206ENST00000524277 JAK2O60674 1132 aa13.1□□□□□ -0.31
SPARC-206ENST00000524277 TADA2AO75478 443 aa13.1□□□□□ -0.31
SPARC-206ENST00000524277 NPTXRO95502 500 aa13.1□□□□□ -0.31
SPARC-206ENST00000524277 MCM7P33993 719 aa13.1□□□□□ -0.31
SPARC-206ENST00000524277 ELAVL2Q12926 359 aaKnown RBP13.1□□□□□ -0.31
SPARC-206ENST00000524277 MAPK6Q16659 721 aa13.1□□□□□ -0.31
SPARC-206ENST00000524277 ASTLQ6HA08 431 aaPredicted RBP13.1□□□□□ -0.31
SPARC-206ENST00000524277 KANK3Q6NY19 840 aa13.1□□□□□ -0.31
SPARC-206ENST00000524277 FUT10Q6P4F1 479 aa13.1□□□□□ -0.31
SPARC-206ENST00000524277 PDXDC1Q6P996 788 aa13.1□□□□□ -0.31
SPARC-206ENST00000524277 TAS1R1Q7RTX1 841 aa13.1□□□□□ -0.31
SPARC-206ENST00000524277 APBB1IPQ7Z5R6 666 aaPredicted RBP13.1□□□□□ -0.31
SPARC-206ENST00000524277 GSTCDQ8NEC7 633 aa13.1□□□□□ -0.31
SPARC-206ENST00000524277 C8orf76Q96K31 380 aa13.1□□□□□ -0.31
SPARC-206ENST00000524277 ZSCAN31Q96LW9 406 aaPredicted RBP13.1□□□□□ -0.31
SPARC-206ENST00000524277 ADPGKQ9BRR6 497 aa13.1□□□□□ -0.31
SPARC-206ENST00000524277 APOL6Q9BWW8 343 aa13.1□□□□□ -0.31
SPARC-206ENST00000524277 TMEM60Q9H2L4 133 aa13.1□□□□□ -0.31
SPARC-206ENST00000524277 NXF3Q9H4D5 531 aaKnown RBP13.1□□□□□ -0.31
SPARC-206ENST00000524277 ARHGEF35A5YM69 484 aa13.09□□□□□ -0.31
SPARC-206ENST00000524277 ST18O60284 1047 aa13.09□□□□□ -0.31
SPARC-206ENST00000524277 ASGR2P07307 311 aa13.09□□□□□ -0.31
SPARC-206ENST00000524277 OR52Z1P0C646 297 aa13.09□□□□□ -0.31
SPARC-206ENST00000524277 CYP11B2P19099 503 aa13.09□□□□□ -0.31
SPARC-206ENST00000524277 AKAP5P24588 427 aa13.09□□□□□ -0.31
SPARC-206ENST00000524277 NAMPTP43490 491 aa13.09□□□□□ -0.31
SPARC-206ENST00000524277 RBM25P49756 843 aaKnown RBP13.09□□□□□ -0.31
SPARC-206ENST00000524277 EFNA5P52803 228 aa13.09□□□□□ -0.31
SPARC-206ENST00000524277 TUSC3Q13454 348 aa13.09□□□□□ -0.31
SPARC-206ENST00000524277 HSP90AA2PQ14568 343 aaPredicted RBP13.09□□□□□ -0.31
SPARC-206ENST00000524277 PADI6Q6TGC4 694 aa13.09□□□□□ -0.31
SPARC-206ENST00000524277 ATOH1Q92858 354 aaPredicted RBP13.09□□□□□ -0.31
SPARC-206ENST00000524277 IFT74Q96LB3 600 aa13.09□□□□□ -0.31
SPARC-206ENST00000524277 RAB34Q9BZG1 259 aa13.09□□□□□ -0.31
SPARC-206ENST00000524277 KCNK12Q9HB15 430 aa13.09□□□□□ -0.31
SPARC-206ENST00000524277 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.09□□□□□ -0.31
SPARC-206ENST00000524277 NOL7Q9UMY1 257 aaKnown RBP13.09□□□□□ -0.31
SPARC-206ENST00000524277 DUSP12Q9UNI6 340 aa13.09□□□□□ -0.31
SPARC-206ENST00000524277 ZFP37Q9Y6Q3 630 aaPredicted RBP13.09□□□□□ -0.31
SPARC-206ENST00000524277 SF3B1O75533 1304 aaKnown RBP eCLIP13.09□□□□□ -0.31
SPARC-206ENST00000524277 ARID2Q68CP9 1835 aa13.09□□□□□ -0.31
SPARC-206ENST00000524277 ACKR2O00590 384 aa13.08□□□□□ -0.32
SPARC-206ENST00000524277 WNT7AO00755 349 aa13.08□□□□□ -0.32
SPARC-206ENST00000524277 B4GALT5O43286 388 aa13.08□□□□□ -0.32
SPARC-206ENST00000524277 DTNBO60941 627 aa13.08□□□□□ -0.32
SPARC-206ENST00000524277 MED24O75448 989 aa13.08□□□□□ -0.32
SPARC-206ENST00000524277 THP07101 528 aa13.08□□□□□ -0.32
SPARC-206ENST00000524277 PRPF4BQ13523 1007 aaKnown RBP13.08□□□□□ -0.32
SPARC-206ENST00000524277 GNL2Q13823 731 aaKnown RBP13.08□□□□□ -0.32
SPARC-206ENST00000524277 PDIA5Q14554 519 aa13.08□□□□□ -0.32
SPARC-206ENST00000524277 TMEM132AQ24JP5 1023 aa13.08□□□□□ -0.32
SPARC-206ENST00000524277 MAEAQ7L5Y9 396 aa13.08□□□□□ -0.32
SPARC-206ENST00000524277 FBXO18Q8NFZ0 1043 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms