RNA–Protein interactions for RNA: ENST00000523952.5

PTPN12-216, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 4

Gene PTPN12, Length 500 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-216ENST00000523952 COL9A3Q14050 684 aaPredicted RBP10.43□□□□□ -0.74
PTPN12-216ENST00000523952 UGCGQ16739 394 aa10.43□□□□□ -0.74
PTPN12-216ENST00000523952 USP41Q3LFD5 358 aa10.43□□□□□ -0.74
PTPN12-216ENST00000523952 XKR3Q5GH77 459 aa10.43□□□□□ -0.74
PTPN12-216ENST00000523952 PPM1LQ5SGD2 360 aa10.43□□□□□ -0.74
PTPN12-216ENST00000523952 LRCH2Q5VUJ6 765 aa10.43□□□□□ -0.74
PTPN12-216ENST00000523952 LAIR1Q6GTX8 287 aa10.43□□□□□ -0.74
PTPN12-216ENST00000523952 TPRG1Q6ZUI0 275 aa10.43□□□□□ -0.74
PTPN12-216ENST00000523952 TAS1R1Q7RTX1 841 aa10.43□□□□□ -0.74
PTPN12-216ENST00000523952 KSR1Q8IVT5 923 aa10.43□□□□□ -0.74
PTPN12-216ENST00000523952 HACE1Q8IYU2 909 aa10.43□□□□□ -0.74
PTPN12-216ENST00000523952 DDX1Q92499 740 aaKnown RBP10.43□□□□□ -0.74
PTPN12-216ENST00000523952 MAP4K1Q92918 833 aa10.43□□□□□ -0.74
PTPN12-216ENST00000523952 KXD1Q9BQD3 176 aa10.43□□□□□ -0.74
PTPN12-216ENST00000523952 SH2D3AQ9BRG2 576 aa10.43□□□□□ -0.74
PTPN12-216ENST00000523952 RPP25Q9BUL9 199 aaKnown RBP10.43□□□□□ -0.74
PTPN12-216ENST00000523952 RXFP1Q9HBX9 757 aa10.43□□□□□ -0.74
PTPN12-216ENST00000523952 ANGPTL2Q9UKU9 493 aa10.43□□□□□ -0.74
PTPN12-216ENST00000523952 MTF2Q9Y483 593 aaPredicted RBP10.43□□□□□ -0.74
PTPN12-216ENST00000523952 DYNC1LI1Q9Y6G9 523 aaKnown RBP10.43□□□□□ -0.74
PTPN12-216ENST00000523952 CNOT1A5YKK6 2376 aaKnown RBP10.43□□□□□ -0.74
PTPN12-216ENST00000523952 SLC30A4O14863 429 aa10.42□□□□□ -0.74
PTPN12-216ENST00000523952 ZMYND10O75800 440 aa10.42□□□□□ -0.74
PTPN12-216ENST00000523952 C1RP00736 705 aa10.42□□□□□ -0.74
PTPN12-216ENST00000523952 SRGAP2CP0DJJ0 459 aa10.42□□□□□ -0.74
PTPN12-216ENST00000523952 GNA11P29992 359 aa10.42□□□□□ -0.74
PTPN12-216ENST00000523952 FGD1P98174 961 aa10.42□□□□□ -0.74
PTPN12-216ENST00000523952 IL31Q6EBC2 164 aa10.42□□□□□ -0.74
PTPN12-216ENST00000523952 APOA5Q6Q788 366 aa10.42□□□□□ -0.74
PTPN12-216ENST00000523952 ZNF852Q6ZMS4 543 aa10.42□□□□□ -0.74
PTPN12-216ENST00000523952 ARHGAP30Q7Z6I6 1101 aaPredicted RBP10.42□□□□□ -0.74
PTPN12-216ENST00000523952 MRPL10Q7Z7H8 261 aaKnown RBP10.42□□□□□ -0.74
PTPN12-216ENST00000523952 SGMS1Q86VZ5 419 aa10.42□□□□□ -0.74
PTPN12-216ENST00000523952 COLGALT2Q8IYK4 626 aa10.42□□□□□ -0.74
PTPN12-216ENST00000523952 EXOC6Q8TAG9 804 aa10.42□□□□□ -0.74
PTPN12-216ENST00000523952 BICD2Q8TD16 824 aa10.42□□□□□ -0.74
PTPN12-216ENST00000523952 B3GALT6Q96L58 329 aa10.42□□□□□ -0.74
PTPN12-216ENST00000523952 DDX23Q9BUQ8 820 aaKnown RBP10.42□□□□□ -0.74
PTPN12-216ENST00000523952 APOL6Q9BWW8 343 aa10.42□□□□□ -0.74
PTPN12-216ENST00000523952 NIFKQ9BYG3 293 aaKnown RBP10.42□□□□□ -0.74
PTPN12-216ENST00000523952 TRIM6Q9C030 488 aaPredicted RBP10.42□□□□□ -0.74
PTPN12-216ENST00000523952 FAM217BQ9NTX9 383 aaPredicted RBP10.42□□□□□ -0.74
PTPN12-216ENST00000523952 MARCH5Q9NX47 278 aa10.42□□□□□ -0.74
PTPN12-216ENST00000523952 FNIP2Q9P278 1114 aa10.42□□□□□ -0.74
PTPN12-216ENST00000523952 COL4A3BPQ9Y5P4 624 aa10.42□□□□□ -0.74
PTPN12-216ENST00000523952 ATG2BQ96BY7 2078 aa10.42□□□□□ -0.74
PTPN12-216ENST00000523952 CITO14578 2027 aa10.41□□□□□ -0.74
PTPN12-216ENST00000523952 TMEM150BA6NC51 233 aa10.41□□□□□ -0.74
PTPN12-216ENST00000523952 ARL5CA6NH57 179 aa10.41□□□□□ -0.74
PTPN12-216ENST00000523952 CCL16O15467 120 aa10.41□□□□□ -0.74
PTPN12-216ENST00000523952 LILRB5O75023 590 aa10.41□□□□□ -0.74
PTPN12-216ENST00000523952 LRP3O75074 770 aa10.41□□□□□ -0.74
PTPN12-216ENST00000523952 MAFO75444 373 aaPredicted RBP10.41□□□□□ -0.74
PTPN12-216ENST00000523952 TADA2AO75478 443 aa10.41□□□□□ -0.74
PTPN12-216ENST00000523952 IGHDP01880 384 aa10.41□□□□□ -0.74
PTPN12-216ENST00000523952 HNRNPA1P09651 372 aaKnown RBP eCLIP10.41□□□□□ -0.74
PTPN12-216ENST00000523952 GSPT1P15170 499 aaKnown RBP10.41□□□□□ -0.74
PTPN12-216ENST00000523952 RPL17P18621 184 aaKnown RBP10.41□□□□□ -0.74
PTPN12-216ENST00000523952 NCLP19338 710 aaKnown RBP10.41□□□□□ -0.74
PTPN12-216ENST00000523952 MLH1P40692 756 aa10.41□□□□□ -0.74
PTPN12-216ENST00000523952 RPS9P46781 194 aaKnown RBP10.41□□□□□ -0.74
PTPN12-216ENST00000523952 AFF1P51825 1210 aaKnown RBP10.41□□□□□ -0.74
PTPN12-216ENST00000523952 AKAP17AQ02040 695 aaKnown RBP10.41□□□□□ -0.74
PTPN12-216ENST00000523952 TARBP2Q15633 366 aaKnown RBP10.41□□□□□ -0.74
PTPN12-216ENST00000523952 FUT10Q6P4F1 479 aa10.41□□□□□ -0.74
PTPN12-216ENST00000523952 SRGAP1Q7Z6B7 1085 aa10.41□□□□□ -0.74
PTPN12-216ENST00000523952 EXOC8Q8IYI6 725 aa10.41□□□□□ -0.74
PTPN12-216ENST00000523952 CELF5Q8N6W0 485 aaKnown RBP10.41□□□□□ -0.74
PTPN12-216ENST00000523952 RDM1Q8NG50 284 aa10.41□□□□□ -0.74
PTPN12-216ENST00000523952 SLC7A3Q8WY07 619 aa10.41□□□□□ -0.74
PTPN12-216ENST00000523952 FGF13Q92913 245 aa10.41□□□□□ -0.74
PTPN12-216ENST00000523952 CCDC136Q96JN2 1154 aa10.41□□□□□ -0.74
PTPN12-216ENST00000523952 GAD1Q99259 594 aa10.41□□□□□ -0.74
PTPN12-216ENST00000523952 RIT2Q99578 217 aa10.41□□□□□ -0.74
PTPN12-216ENST00000523952 UNC45AQ9H3U1 944 aa10.41□□□□□ -0.74
PTPN12-216ENST00000523952 PARD6AQ9NPB6 346 aa10.41□□□□□ -0.74
PTPN12-216ENST00000523952 NDRG2Q9UN36 371 aaKnown RBP10.41□□□□□ -0.74
PTPN12-216ENST00000523952 EML5Q05BV3 1969 aa10.41□□□□□ -0.74
PTPN12-216ENST00000523952 NUP205Q92621 2012 aa10.4□□□□□ -0.74
PTPN12-216ENST00000523952 SLC27A2O14975 620 aa10.4□□□□□ -0.74
PTPN12-216ENST00000523952 SNPHO15079 494 aa10.4□□□□□ -0.74
PTPN12-216ENST00000523952 MSH4O15457 936 aa10.4□□□□□ -0.74
PTPN12-216ENST00000523952 FOXD2O60548 495 aaPredicted RBP10.4□□□□□ -0.74
PTPN12-216ENST00000523952 C8AP07357 584 aa10.4□□□□□ -0.74
PTPN12-216ENST00000523952 RETP07949 1114 aa10.4□□□□□ -0.74
PTPN12-216ENST00000523952 TARSP26639 723 aaKnown RBP10.4□□□□□ -0.74
PTPN12-216ENST00000523952 SCNN1GP51170 649 aa10.4□□□□□ -0.74
PTPN12-216ENST00000523952 NTHL1P78549 312 aa10.4□□□□□ -0.74
PTPN12-216ENST00000523952 ADCY1Q08828 1119 aa10.4□□□□□ -0.74
PTPN12-216ENST00000523952 MTAPQ13126 283 aa10.4□□□□□ -0.74
PTPN12-216ENST00000523952 COL9A2Q14055 689 aaPredicted RBP10.4□□□□□ -0.74
PTPN12-216ENST00000523952 SIM2Q14190 667 aaPredicted RBP10.4□□□□□ -0.74
PTPN12-216ENST00000523952 PFKFB3Q16875 520 aaPredicted RBP10.4□□□□□ -0.74
PTPN12-216ENST00000523952 RNF20Q5VTR2 975 aa10.4□□□□□ -0.74
PTPN12-216ENST00000523952 CEP57Q86XR8 500 aa10.4□□□□□ -0.74
PTPN12-216ENST00000523952 PSPC1Q8WXF1 523 aaKnown RBP10.4□□□□□ -0.74
PTPN12-216ENST00000523952 CRYGNQ8WXF5 182 aa10.4□□□□□ -0.74
PTPN12-216ENST00000523952 ZMYND12Q9H0C1 365 aa10.4□□□□□ -0.74
PTPN12-216ENST00000523952 SLKQ9H2G2 1235 aaPredicted RBP10.4□□□□□ -0.74
PTPN12-216ENST00000523952 RALYQ9UKM9 306 aaKnown RBP10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms