RNA–Protein interactions for RNA: ENST00000523636.5

PABPC1-223, Transcript of poly(A) binding protein cytoplasmic 1, human

TSL 5

Gene PABPC1, Length 818 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPC1-223	ENST00000523636	SLC30A4	O14863	429 aa		6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	STRN	O43815	780 aa		6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	DHX16	O60231	1041 aa	Known RBP	6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	RNGTT	O60942	597 aa	Known RBP	6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	DUSP11	O75319	330 aa	Known RBP	6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	SNAI1	O95863	264 aa	Predicted RBP	6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	FOS	P01100	380 aa	Predicted RBP	6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	C6orf222	P0C671	652 aa	Predicted RBP	6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	IQCF3	P0C7M6	154 aa		6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	LINC00271	P0C7V0	271 aa		6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	HSPA5	P11021	654 aa	Known RBP	6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	BMP3	P12645	472 aa		6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	YARS	P54577	528 aa	Known RBP	6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	ARHGAP8	P85298	464 aa		6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	BEX3	Q00994	111 aa		6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	COASY	Q13057	564 aa		6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	ITGA7	Q13683	1181 aa		6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	CAMK1	Q14012	370 aa		6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	ZNF792	Q3KQV3	632 aa		6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	SYCP2L	Q5T4T6	812 aa		6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	CXCL17	Q6UXB2	119 aa		6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	ARMCX6	Q7L4S7	300 aa		6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	FERMT3	Q86UX7	667 aa		6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	CLEC10A	Q8IUN9	316 aa		6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	SLFN12	Q8IYM2	578 aa		6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	TAB3	Q8N5C8	712 aa	Predicted RBP	6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	TMEM40	Q8WWA1	233 aa		6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	ACSF2	Q96CM8	615 aa	Predicted RBP	6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	TMEM87B	Q96K49	555 aa		6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	C12orf42	Q96LP6	360 aa		6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	SEMA6C	Q9H3T2	930 aa		6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	CHMP4B	Q9H444	224 aa	Known RBP	6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	DNAJC18	Q9H819	358 aa		6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	TRMT13	Q9NUP7	481 aa	Known RBP	6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	CTNNA3	Q9UI47	895 aa		6.05	□□□□□ -1.44
PABPC1-223	ENST00000523636	RALGAPA1	Q6GYQ0	2036 aa		6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	SLC22A31	A6NKX4	558 aa		6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	C19orf81	C9J6K1	198 aa		6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	TIMM44	O43615	452 aa		6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	C1QL1	O75973	258 aa		6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	BAIAP3	O94812	1187 aa		6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	CST3	P01034	146 aa	Predicted RBP	6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	PGK2	P07205	417 aa		6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	FAM163B	P0C2L3	166 aa		6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	SP9	P0CG40	484 aa		6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	ACTN1	P12814	892 aa		6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	MAP4	P27816	1152 aa	Known RBP	6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	PSMC6	P62333	389 aa		6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	FOXO4	P98177	505 aa		6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	SRSF1	Q07955	248 aa	Known RBP eCLIP	6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	GPM6B	Q13491	265 aa		6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	PICALM	Q13492	652 aa		6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	SERINC3	Q13530	473 aa		6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	ZRSR2	Q15696	482 aa	Known RBP	6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	PLA2G4E	Q3MJ16	856 aa		6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	SGO2	Q562F6	1265 aa		6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	CC2D1B	Q5T0F9	858 aa	Known RBP	6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	CDCP2	Q5VXM1	449 aa		6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	WDR75	Q8IWA0	830 aa	Known RBP	6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	MAML2	Q8IZL2	1156 aa	Predicted RBP	6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	C19orf47	Q8N9M1	422 aa	Known RBP	6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	SHCBP1	Q8NEM2	672 aa		6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	SVIP	Q8NHG7	77 aa		6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	FBLIM1	Q8WUP2	373 aa		6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	GATA6	Q92908	595 aa		6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	TM9SF2	Q99805	663 aa		6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	PUS3	Q9BZE2	481 aa	Known RBP	6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	SPATC1L	Q9H0A9	340 aa		6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	ALDH8A1	Q9H2A2	487 aa	Predicted RBP	6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	SSU72	Q9NP77	194 aa	Known RBP	6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	CHST12	Q9NRB3	414 aa		6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	TJP2	Q9UDY2	1190 aa		6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	APC2	O95996	2303 aa		6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	ACACA	Q13085	2346 aa		6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	PATJ	Q8NI35	1801 aa		6.04	□□□□□ -1.44
PABPC1-223	ENST00000523636	MROH5	Q6ZUA9	1318 aa		6.03	□□□□□ -1.44
PABPC1-223	ENST00000523636	SETD2	Q9BYW2	2564 aa	Predicted RBP	6.03	□□□□□ -1.44
PABPC1-223	ENST00000523636	FAM95C	A0A1B0GW59	222 aa		6.03	□□□□□ -1.44
PABPC1-223	ENST00000523636	ANKRD18B	A2A2Z9	1011 aa		6.03	□□□□□ -1.44
PABPC1-223	ENST00000523636	GOLGA6C	A6NDK9	693 aa		6.03	□□□□□ -1.44
PABPC1-223	ENST00000523636	GOLGA6B	A6NDN3	693 aa		6.03	□□□□□ -1.44
PABPC1-223	ENST00000523636	GRM6	O15303	877 aa		6.03	□□□□□ -1.44
PABPC1-223	ENST00000523636	NCK2	O43639	380 aa		6.03	□□□□□ -1.44
PABPC1-223	ENST00000523636	LRIG2	O94898	1065 aa		6.03	□□□□□ -1.44
PABPC1-223	ENST00000523636	NFIC	P08651	508 aa		6.03	□□□□□ -1.44
PABPC1-223	ENST00000523636	GOLGA6D	P0CG33	693 aa		6.03	□□□□□ -1.44
PABPC1-223	ENST00000523636	VDR	P11473	427 aa		6.03	□□□□□ -1.44
PABPC1-223	ENST00000523636	RAB6A	P20340	208 aa		6.03	□□□□□ -1.44
PABPC1-223	ENST00000523636	HTRA4	P83105	476 aa	Predicted RBP	6.03	□□□□□ -1.44
PABPC1-223	ENST00000523636	SLBP	Q14493	270 aa	Known RBP eCLIP	6.03	□□□□□ -1.44
PABPC1-223	ENST00000523636	MAPRE1	Q15691	268 aa	Known RBP	6.03	□□□□□ -1.44
PABPC1-223	ENST00000523636	TNNI3K	Q59H18	835 aa		6.03	□□□□□ -1.44
PABPC1-223	ENST00000523636	FBXW10	Q5XX13	1052 aa		6.03	□□□□□ -1.44
PABPC1-223	ENST00000523636	PAOX	Q6QHF9	649 aa		6.03	□□□□□ -1.44
PABPC1-223	ENST00000523636	SEZ6L2	Q6UXD5	910 aa		6.03	□□□□□ -1.44
PABPC1-223	ENST00000523636	LSR	Q86X29	649 aa	Predicted RBP	6.03	□□□□□ -1.44
PABPC1-223	ENST00000523636	ABRA	Q8N0Z2	381 aa		6.03	□□□□□ -1.44
PABPC1-223	ENST00000523636	SAMD3	Q8N6K7	520 aa		6.03	□□□□□ -1.44
PABPC1-223	ENST00000523636	MFSD2A	Q8NA29	543 aa		6.03	□□□□□ -1.44
PABPC1-223	ENST00000523636	PCSK9	Q8NBP7	692 aa	Known RBP	6.03	□□□□□ -1.44

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