RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 ZC2HC1CQ53FD0 456 aaPredicted RBP7.5□□□□□ -1.21
CSMD1-211ENST00000523062 XKR3Q5GH77 459 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 LCE1DQ5T752 114 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 FAM102BQ5T8I3 360 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 UTP14CQ5TAP6 766 aaKnown RBP7.5□□□□□ -1.21
CSMD1-211ENST00000523062 MAP1SQ66K74 1059 aaPredicted RBP7.5□□□□□ -1.21
CSMD1-211ENST00000523062 KCNV1Q6PIU1 500 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 ABHD15Q6UXT9 468 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 SEPT14Q6ZU15 432 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 ANO5Q75V66 913 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 SLC9A9Q8IVB4 645 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 SYCP3Q8IZU3 236 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 MCPH1Q8NEM0 835 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 SMCR8Q8TEV9 937 aaPredicted RBP7.5□□□□□ -1.21
CSMD1-211ENST00000523062 ZNF592Q92610 1267 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 KIFAP3Q92845 792 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 CEP170P1Q96L14 293 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 ACCSQ96QU6 501 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 DESI2Q9BSY9 194 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 LSM14BQ9BX40 385 aaKnown RBP7.5□□□□□ -1.21
CSMD1-211ENST00000523062 BCAS3Q9H6U6 928 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 MMRN2Q9H8L6 949 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 ATP6V0A4Q9HBG4 840 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 GBA2Q9HCG7 927 aaPredicted RBP7.5□□□□□ -1.21
CSMD1-211ENST00000523062 POLD4Q9HCU8 107 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 TXNRD2Q9NNW7 524 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 RAB6BQ9NRW1 208 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 AGPAT3Q9NRZ7 376 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 FAM207AQ9NSI2 230 aaPredicted RBP7.5□□□□□ -1.21
CSMD1-211ENST00000523062 CEP72Q9P209 647 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 RBPJLQ9UBG7 517 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 EXOC7Q9UPT5 735 aa7.5□□□□□ -1.21
CSMD1-211ENST00000523062 DNAJC25-GNG10A0A024R161 153 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 CCL15-CCL14A0A0B4J2E2 113 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 GTPBP10A4D1E9 387 aaKnown RBP7.49□□□□□ -1.21
CSMD1-211ENST00000523062 TMEM150BA6NC51 233 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 RASSF10A6NK89 507 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 ZNF862O60290 1169 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 AKAP3O75969 853 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 STBD1O95210 358 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 NDUFA10O95299 355 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 ATG7O95352 703 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 IPO7O95373 1038 aaKnown RBP7.49□□□□□ -1.21
CSMD1-211ENST00000523062 TGFB3P10600 412 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 ABCD1P33897 745 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 GTF2F1P35269 517 aaKnown RBP eCLIP7.49□□□□□ -1.21
CSMD1-211ENST00000523062 SMTNP53814 917 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 NPEPPSP55786 919 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 RTP1P59025 263 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 KCNA1Q09470 495 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 DMP1Q13316 513 aaPredicted RBP7.49□□□□□ -1.21
CSMD1-211ENST00000523062 CCL15Q16663 113 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 DCAF17Q5H9S7 520 aaPredicted RBP7.49□□□□□ -1.21
CSMD1-211ENST00000523062 WDR78Q5VTH9 848 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 FAM160B1Q5W0V3 765 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 SWSAP1Q6NVH7 229 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 PDXDC1Q6P996 788 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 FIGNL1Q6PIW4 674 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 SYT10Q6XYQ8 523 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 CYFIP1Q7L576 1253 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 MAEAQ7L5Y9 396 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 CACNA2D4Q7Z3S7 1137 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 ANKRD23Q86SG2 305 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 CCDC60Q8IWA6 550 aaPredicted RBP7.49□□□□□ -1.21
CSMD1-211ENST00000523062 C12orf56Q8IXR9 622 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 FAM186BQ8IYM0 893 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 CCDC170Q8IYT3 715 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 C2orf69Q8N8R5 385 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 C17orf75Q9HAS0 396 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 AVENQ9NQS1 362 aaPredicted RBP7.49□□□□□ -1.21
CSMD1-211ENST00000523062 ZNF302Q9NR11 478 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 AGPAT5Q9NUQ2 364 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 DMAC2Q9NW81 257 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 FRMD4BQ9Y2L6 1034 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 PPME1Q9Y570 386 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 PCDHB9Q9Y5E1 797 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 LRRC37A2A6NM11 1700 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 SYNGAP1Q96PV0 1343 aa7.49□□□□□ -1.21
CSMD1-211ENST00000523062 KIAA1217Q5T5P2 1943 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 ASB14A6NK59 587 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 EIF3CLB5ME19 914 aaKnown RBP7.48□□□□□ -1.21
CSMD1-211ENST00000523062 H0YCG3 227 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 PDHXO00330 501 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 DYNC1I1O14576 645 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 EPHB6O15197 1021 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 SLC16A4O15374 487 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 KIF5CO60282 957 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 FARP2O94887 1054 aaPredicted RBP7.48□□□□□ -1.21
CSMD1-211ENST00000523062 GNRH1P01148 92 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 SCP2P22307 547 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 GCLCP48506 637 aaPredicted RBP7.48□□□□□ -1.21
CSMD1-211ENST00000523062 CASP4P49662 377 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 CYP2J2P51589 502 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 PEX3P56589 373 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 GNG11P61952 73 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 KRT83P78385 493 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 GTF2BQ00403 316 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 SP2Q02086 613 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 PPP2R5AQ15172 486 aa7.48□□□□□ -1.21
CSMD1-211ENST00000523062 EXOC3L4Q17RC7 722 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms