RNA–Protein interactions for RNA: ENST00000522987.1

MRPS28-209, Transcript of mitochondrial ribosomal protein S28, humanhuman

TSL 3

Gene MRPS28, Length 487 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28-209ENST00000522987 ARL2P36404 184 aa17.13■□□□□ 0.33
MRPS28-209ENST00000522987 RARRES1P49788 294 aa17.13■□□□□ 0.33
MRPS28-209ENST00000522987 NCBP1Q09161 790 aaKnown RBP17.13■□□□□ 0.33
MRPS28-209ENST00000522987 ANKRD1Q15327 319 aa17.13■□□□□ 0.33
MRPS28-209ENST00000522987 PLCD3Q8N3E9 789 aa17.13■□□□□ 0.33
MRPS28-209ENST00000522987 CNNM3Q8NE01 707 aa17.13■□□□□ 0.33
MRPS28-209ENST00000522987 HASPINQ8TF76 798 aa17.13■□□□□ 0.33
MRPS28-209ENST00000522987 RSAD2Q8WXG1 361 aa17.13■□□□□ 0.33
MRPS28-209ENST00000522987 ACSF2Q96CM8 615 aaPredicted RBP17.13■□□□□ 0.33
MRPS28-209ENST00000522987 POLD4Q9HCU8 107 aa17.13■□□□□ 0.33
MRPS28-209ENST00000522987 ANKEF1Q9NU02 776 aa17.13■□□□□ 0.33
MRPS28-209ENST00000522987 MYH15Q9Y2K3 1946 aa17.13■□□□□ 0.33
MRPS28-209ENST00000522987 TTLL13PA6NNM8 815 aa17.12■□□□□ 0.33
MRPS28-209ENST00000522987 INPPL1O15357 1258 aa17.12■□□□□ 0.33
MRPS28-209ENST00000522987 NARSO43776 548 aaKnown RBP17.12■□□□□ 0.33
MRPS28-209ENST00000522987 GFRA3O60609 400 aa17.12■□□□□ 0.33
MRPS28-209ENST00000522987 N4BP1O75113 896 aaKnown RBP17.12■□□□□ 0.33
MRPS28-209ENST00000522987 DGAT1O75907 488 aa17.12■□□□□ 0.33
MRPS28-209ENST00000522987 ADH1AP07327 375 aa17.12■□□□□ 0.33
MRPS28-209ENST00000522987 AXLP30530 894 aa17.12■□□□□ 0.33
MRPS28-209ENST00000522987 NEK4P51957 841 aa17.12■□□□□ 0.33
MRPS28-209ENST00000522987 DSC1Q08554 894 aa17.12■□□□□ 0.33
MRPS28-209ENST00000522987 ST3GAL1Q11201 340 aa17.12■□□□□ 0.33
MRPS28-209ENST00000522987 TRIM29Q14134 588 aa17.12■□□□□ 0.33
MRPS28-209ENST00000522987 OTOP3Q7RTS5 596 aa17.12■□□□□ 0.33
MRPS28-209ENST00000522987 GPR62Q9BZJ7 368 aa17.12■□□□□ 0.33
MRPS28-209ENST00000522987 UBN1Q9NPG3 1134 aa17.12■□□□□ 0.33
MRPS28-209ENST00000522987 USTQ9Y2C2 406 aa17.12■□□□□ 0.33
MRPS28-209ENST00000522987 GALR2O43603 387 aaPredicted RBP17.11■□□□□ 0.33
MRPS28-209ENST00000522987 LYPLA2O95372 231 aa17.11■□□□□ 0.33
MRPS28-209ENST00000522987 GLUD1P00367 558 aa17.11■□□□□ 0.33
MRPS28-209ENST00000522987 TMEM132AQ24JP5 1023 aa17.11■□□□□ 0.33
MRPS28-209ENST00000522987 KIAA0319Q5VV43 1072 aa17.11■□□□□ 0.33
MRPS28-209ENST00000522987 FUT10Q6P4F1 479 aa17.11■□□□□ 0.33
MRPS28-209ENST00000522987 RIN2Q8WYP3 895 aaPredicted RBP17.11■□□□□ 0.33
MRPS28-209ENST00000522987 SMG7Q92540 1137 aaKnown RBP17.11■□□□□ 0.33
MRPS28-209ENST00000522987 PAAF1Q9BRP4 392 aa17.11■□□□□ 0.33
MRPS28-209ENST00000522987 CXCL16Q9H2A7 254 aa17.11■□□□□ 0.33
MRPS28-209ENST00000522987 KCNK12Q9HB15 430 aa17.11■□□□□ 0.33
MRPS28-209ENST00000522987 FBXL21Q9UKT6 434 aa17.11■□□□□ 0.33
MRPS28-209ENST00000522987 ZFHX2Q9C0A1 2572 aaPredicted RBP17.1■□□□□ 0.33
MRPS28-209ENST00000522987 CASTOR2A6NHX0 329 aa17.1■□□□□ 0.33
MRPS28-209ENST00000522987 PI15O43692 258 aa17.1■□□□□ 0.33
MRPS28-209ENST00000522987 MED24O75448 989 aa17.1■□□□□ 0.33
MRPS28-209ENST00000522987 CFHP08603 1231 aa17.1■□□□□ 0.33
MRPS28-209ENST00000522987 ANAPC15P60006 121 aa17.1■□□□□ 0.33
MRPS28-209ENST00000522987 CWF19L1Q69YN2 538 aaKnown RBP17.1■□□□□ 0.33
MRPS28-209ENST00000522987 ASTLQ6HA08 431 aaPredicted RBP17.1■□□□□ 0.33
MRPS28-209ENST00000522987 SLC27A1Q6PCB7 646 aa17.1■□□□□ 0.33
MRPS28-209ENST00000522987 POTEGQ6S5H5 508 aa17.1■□□□□ 0.33
MRPS28-209ENST00000522987 PRSS55Q6UWB4 352 aaPredicted RBP17.1■□□□□ 0.33
MRPS28-209ENST00000522987 IFNLR1Q8IU57 520 aaPredicted RBP17.1■□□□□ 0.33
MRPS28-209ENST00000522987 GSTCDQ8NEC7 633 aa17.1■□□□□ 0.33
MRPS28-209ENST00000522987 CCDC51Q96ER9 411 aa17.1■□□□□ 0.33
MRPS28-209ENST00000522987 MTMR9Q96QG7 549 aa17.1■□□□□ 0.33
MRPS28-209ENST00000522987 COLEC11Q9BWP8 271 aa17.1■□□□□ 0.33
MRPS28-209ENST00000522987 PIDD1Q9HB75 910 aa17.1■□□□□ 0.33
MRPS28-209ENST00000522987 GIT1Q9Y2X7 761 aa17.1■□□□□ 0.33
MRPS28-209ENST00000522987 MYH11P35749 1972 aa17.09■□□□□ 0.33
MRPS28-209ENST00000522987 NR1I2O75469 434 aa17.09■□□□□ 0.33
MRPS28-209ENST00000522987 SPATA31C1P0DKV0 1188 aa17.09■□□□□ 0.33
MRPS28-209ENST00000522987 DSG1Q02413 1049 aa17.09■□□□□ 0.33
MRPS28-209ENST00000522987 TDGQ13569 410 aa17.09■□□□□ 0.33
MRPS28-209ENST00000522987 ZNF174Q15697 407 aa17.09■□□□□ 0.33
MRPS28-209ENST00000522987 CATSPER3Q86XQ3 398 aa17.09■□□□□ 0.33
MRPS28-209ENST00000522987 HACE1Q8IYU2 909 aa17.09■□□□□ 0.33
MRPS28-209ENST00000522987 RNF168Q8IYW5 571 aaPredicted RBP17.09■□□□□ 0.33
MRPS28-209ENST00000522987 BSNDQ8WZ55 320 aa17.09■□□□□ 0.33
MRPS28-209ENST00000522987 MYADMQ96S97 322 aa17.09■□□□□ 0.33
MRPS28-209ENST00000522987 ADAM28Q9UKQ2 775 aa17.09■□□□□ 0.33
MRPS28-209ENST00000522987 CLUHO75153 1309 aa17.09■□□□□ 0.33
MRPS28-209ENST00000522987 STK25O00506 426 aa17.08■□□□□ 0.32
MRPS28-209ENST00000522987 TGM5O43548 720 aa17.08■□□□□ 0.32
MRPS28-209ENST00000522987 TADA2AO75478 443 aa17.08■□□□□ 0.32
MRPS28-209ENST00000522987 SEC24BO95487 1268 aa17.08■□□□□ 0.32
MRPS28-209ENST00000522987 EFEMP2O95967 443 aa17.08■□□□□ 0.32
MRPS28-209ENST00000522987 C15orf39Q6ZRI6 1047 aa17.08■□□□□ 0.32
MRPS28-209ENST00000522987 GET4Q7L5D6 327 aaPredicted RBP17.08■□□□□ 0.32
MRPS28-209ENST00000522987 ASCL5Q7RTU5 278 aa17.08■□□□□ 0.32
MRPS28-209ENST00000522987 CEP57Q86XR8 500 aa17.08■□□□□ 0.32
MRPS28-209ENST00000522987 NOSTRINQ8IVI9 506 aa17.08■□□□□ 0.32
MRPS28-209ENST00000522987 CCDC83Q8IWF9 413 aa17.08■□□□□ 0.32
MRPS28-209ENST00000522987 SIX5Q8N196 739 aa17.08■□□□□ 0.32
MRPS28-209ENST00000522987 ZNF707Q96C28 371 aaPredicted RBP17.08■□□□□ 0.32
MRPS28-209ENST00000522987 KIFC3Q9BVG8 833 aa17.08■□□□□ 0.32
MRPS28-209ENST00000522987 RXFP1Q9HBX9 757 aa17.08■□□□□ 0.32
MRPS28-209ENST00000522987 SNTG2Q9NY99 539 aa17.08■□□□□ 0.32
MRPS28-209ENST00000522987 STK39Q9UEW8 545 aa17.08■□□□□ 0.32
MRPS28-209ENST00000522987 SSX2IPQ9Y2D8 614 aa17.08■□□□□ 0.32
MRPS28-209ENST00000522987 COL4A3Q01955 1670 aa17.07■□□□□ 0.32
MRPS28-209ENST00000522987 USP34Q70CQ2 3546 aa17.07■□□□□ 0.32
MRPS28-209ENST00000522987 A0A1B0GUA9 196 aa17.07■□□□□ 0.32
MRPS28-209ENST00000522987 EDN1P05305 212 aa17.07■□□□□ 0.32
MRPS28-209ENST00000522987 NPR3P17342 541 aa17.07■□□□□ 0.32
MRPS28-209ENST00000522987 POU5F1BQ06416 359 aa17.07■□□□□ 0.32
MRPS28-209ENST00000522987 GRIK3Q13003 919 aa17.07■□□□□ 0.32
MRPS28-209ENST00000522987 NBR1Q14596 966 aa17.07■□□□□ 0.32
MRPS28-209ENST00000522987 PCBP1Q15365 356 aaKnown RBP eCLIP17.07■□□□□ 0.32
MRPS28-209ENST00000522987 USP41Q3LFD5 358 aa17.07■□□□□ 0.32
MRPS28-209ENST00000522987 EEF1DP3Q658K8 133 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms