RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 SUGP1Q8IWZ8 645 aaKnown RBP7.87□□□□□ -1.15
SDCBP-210ENST00000522843 LRRC47Q8N1G4 583 aaKnown RBP7.87□□□□□ -1.15
SDCBP-210ENST00000522843 CAGE1Q8TC20 777 aa7.87□□□□□ -1.15
SDCBP-210ENST00000522843 STK35Q8TDR2 534 aa7.87□□□□□ -1.15
SDCBP-210ENST00000522843 ARHGAP45Q92619 1136 aa7.87□□□□□ -1.15
SDCBP-210ENST00000522843 KAT2BQ92831 832 aa7.87□□□□□ -1.15
SDCBP-210ENST00000522843 MKL1Q969V6 931 aa7.87□□□□□ -1.15
SDCBP-210ENST00000522843 KIRREL1Q96J84 757 aa7.87□□□□□ -1.15
SDCBP-210ENST00000522843 OSBPL7Q9BZF2 842 aa7.87□□□□□ -1.15
SDCBP-210ENST00000522843 PPP4R2Q9NY27 417 aa7.87□□□□□ -1.15
SDCBP-210ENST00000522843 CLIP2Q9UDT6 1046 aa7.87□□□□□ -1.15
SDCBP-210ENST00000522843 CTNNA3Q9UI47 895 aa7.87□□□□□ -1.15
SDCBP-210ENST00000522843 INSL6Q9Y581 213 aa7.87□□□□□ -1.15
SDCBP-210ENST00000522843 NCANO14594 1321 aa7.86□□□□□ -1.15
SDCBP-210ENST00000522843 GOLIM4O00461 696 aa7.86□□□□□ -1.15
SDCBP-210ENST00000522843 GRM6O15303 877 aa7.86□□□□□ -1.15
SDCBP-210ENST00000522843 ARIH2O95376 493 aa7.86□□□□□ -1.15
SDCBP-210ENST00000522843 C1QTNF9P0C862 333 aa7.86□□□□□ -1.15
SDCBP-210ENST00000522843 ALAS1P13196 640 aa7.86□□□□□ -1.15
SDCBP-210ENST00000522843 TRIM27P14373 513 aa7.86□□□□□ -1.15
SDCBP-210ENST00000522843 ARNTP27540 789 aa7.86□□□□□ -1.15
SDCBP-210ENST00000522843 ADD2P35612 726 aa7.86□□□□□ -1.15
SDCBP-210ENST00000522843 NBL1P41271 181 aa7.86□□□□□ -1.15
SDCBP-210ENST00000522843 ALDH5A1P51649 535 aaPredicted RBP7.86□□□□□ -1.15
SDCBP-210ENST00000522843 CLCN7P51798 805 aa7.86□□□□□ -1.15
SDCBP-210ENST00000522843 RARSP54136 660 aaKnown RBP7.86□□□□□ -1.15
SDCBP-210ENST00000522843 KCNA1Q09470 495 aa7.86□□□□□ -1.15
SDCBP-210ENST00000522843 RASGRP2Q7LDG7 609 aa7.86□□□□□ -1.15
SDCBP-210ENST00000522843 SESTD1Q86VW0 696 aa7.86□□□□□ -1.15
SDCBP-210ENST00000522843 SULF2Q8IWU5 870 aa7.86□□□□□ -1.15
SDCBP-210ENST00000522843 TMEM192Q8IY95 271 aa7.86□□□□□ -1.15
SDCBP-210ENST00000522843 GMCL1P1Q8NEA9 526 aa7.86□□□□□ -1.15
SDCBP-210ENST00000522843 MSLNLQ96KJ4 702 aa7.86□□□□□ -1.15
SDCBP-210ENST00000522843 CRBNQ96SW2 442 aa7.86□□□□□ -1.15
SDCBP-210ENST00000522843 CTDP1Q9Y5B0 961 aaPredicted RBP7.86□□□□□ -1.15
SDCBP-210ENST00000522843 CFAP47Q6ZTR5 3102 aa7.86□□□□□ -1.15
SDCBP-210ENST00000522843 B8ZZF3 427 aa7.85□□□□□ -1.15
SDCBP-210ENST00000522843 TMEM232C9JQI7 657 aa7.85□□□□□ -1.15
SDCBP-210ENST00000522843 NFIBO00712 420 aa7.85□□□□□ -1.15
SDCBP-210ENST00000522843 EYA4O95677 639 aa7.85□□□□□ -1.15
SDCBP-210ENST00000522843 KRT1P04264 644 aa7.85□□□□□ -1.15
SDCBP-210ENST00000522843 CHMP4BP1P59074 171 aa7.85□□□□□ -1.15
SDCBP-210ENST00000522843 SIGLEC14Q08ET2 396 aa7.85□□□□□ -1.15
SDCBP-210ENST00000522843 ADAM15Q13444 863 aa7.85□□□□□ -1.15
SDCBP-210ENST00000522843 CAMK1Q14012 370 aa7.85□□□□□ -1.15
SDCBP-210ENST00000522843 BAATQ14032 418 aaPredicted RBP7.85□□□□□ -1.15
SDCBP-210ENST00000522843 TTF1Q15361 905 aaPredicted RBP7.85□□□□□ -1.15
SDCBP-210ENST00000522843 TKFCQ3LXA3 575 aa7.85□□□□□ -1.15
SDCBP-210ENST00000522843 ZNF618Q5T7W0 954 aa7.85□□□□□ -1.15
SDCBP-210ENST00000522843 SLFN13Q68D06 897 aa7.85□□□□□ -1.15
SDCBP-210ENST00000522843 AACSQ86V21 672 aa7.85□□□□□ -1.15
SDCBP-210ENST00000522843 RPAP2Q8IXW5 612 aaPredicted RBP7.85□□□□□ -1.15
SDCBP-210ENST00000522843 MYOCDQ8IZQ8 938 aa7.85□□□□□ -1.15
SDCBP-210ENST00000522843 DBF4BQ8NFT6 615 aa7.85□□□□□ -1.15
SDCBP-210ENST00000522843 CHMP4CQ96CF2 233 aa7.85□□□□□ -1.15
SDCBP-210ENST00000522843 CEP95Q96GE4 821 aa7.85□□□□□ -1.15
SDCBP-210ENST00000522843 YTHDC1Q96MU7 727 aaKnown RBP7.85□□□□□ -1.15
SDCBP-210ENST00000522843 CLEC1BQ9P126 229 aa7.85□□□□□ -1.15
SDCBP-210ENST00000522843 CD207Q9UJ71 328 aa7.85□□□□□ -1.15
SDCBP-210ENST00000522843 RALGAPA2Q2PPJ7 1873 aa7.85□□□□□ -1.15
SDCBP-210ENST00000522843 ACACBO00763 2458 aa7.85□□□□□ -1.15
SDCBP-210ENST00000522843 CEP250Q9BV73 2442 aa7.84□□□□□ -1.15
SDCBP-210ENST00000522843 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.84□□□□□ -1.15
SDCBP-210ENST00000522843 EFCAB14O75071 495 aa7.84□□□□□ -1.15
SDCBP-210ENST00000522843 ARP10275 920 aa7.84□□□□□ -1.15
SDCBP-210ENST00000522843 EDNRBP24530 442 aa7.84□□□□□ -1.15
SDCBP-210ENST00000522843 RRP1P56182 461 aaKnown RBP7.84□□□□□ -1.15
SDCBP-210ENST00000522843 ZNF200P98182 395 aaPredicted RBP7.84□□□□□ -1.15
SDCBP-210ENST00000522843 NSMFQ6X4W1 530 aa7.84□□□□□ -1.15
SDCBP-210ENST00000522843 SLC30A10Q6XR72 485 aa7.84□□□□□ -1.15
SDCBP-210ENST00000522843 TTLL10Q6ZVT0 673 aa7.84□□□□□ -1.15
SDCBP-210ENST00000522843 C3orf58Q8NDZ4 430 aa7.84□□□□□ -1.15
SDCBP-210ENST00000522843 STAG1Q8WVM7 1258 aa7.84□□□□□ -1.15
SDCBP-210ENST00000522843 TOP1MTQ969P6 601 aa7.84□□□□□ -1.15
SDCBP-210ENST00000522843 ASB16Q96NS5 453 aa7.84□□□□□ -1.15
SDCBP-210ENST00000522843 SAMD11Q96NU1 681 aa7.84□□□□□ -1.15
SDCBP-210ENST00000522843 DNAJC2Q99543 621 aaKnown RBP7.84□□□□□ -1.15
SDCBP-210ENST00000522843 EMILIN2Q9BXX0 1053 aa7.84□□□□□ -1.15
SDCBP-210ENST00000522843 PUS7LQ9H0K6 701 aaKnown RBP7.84□□□□□ -1.15
SDCBP-210ENST00000522843 MTMR4Q9NYA4 1195 aa7.84□□□□□ -1.15
SDCBP-210ENST00000522843 HDAC6Q9UBN7 1215 aa7.84□□□□□ -1.15
SDCBP-210ENST00000522843 SLC4A4Q9Y6R1 1079 aa7.84□□□□□ -1.15
SDCBP-210ENST00000522843 C5orf67F2Z3F1 127 aa7.83□□□□□ -1.16
SDCBP-210ENST00000522843 NCK2O43639 380 aa7.83□□□□□ -1.16
SDCBP-210ENST00000522843 KPNA6O60684 536 aa7.83□□□□□ -1.16
SDCBP-210ENST00000522843 PRDM1O75626 825 aa7.83□□□□□ -1.16
SDCBP-210ENST00000522843 PARNO95453 639 aaKnown RBP7.83□□□□□ -1.16
SDCBP-210ENST00000522843 GLP2RO95838 553 aa7.83□□□□□ -1.16
SDCBP-210ENST00000522843 AMHP03971 560 aa7.83□□□□□ -1.16
SDCBP-210ENST00000522843 MMP3P08254 477 aa7.83□□□□□ -1.16
SDCBP-210ENST00000522843 DNAJB1P25685 340 aa7.83□□□□□ -1.16
SDCBP-210ENST00000522843 STAT2P52630 851 aa7.83□□□□□ -1.16
SDCBP-210ENST00000522843 PPP2R5BQ15173 497 aa7.83□□□□□ -1.16
SDCBP-210ENST00000522843 SBK1Q52WX2 424 aa7.83□□□□□ -1.16
SDCBP-210ENST00000522843 PLEKHG4Q58EX7 1191 aa7.83□□□□□ -1.16
SDCBP-210ENST00000522843 CCDC62Q6P9F0 684 aa7.83□□□□□ -1.16
SDCBP-210ENST00000522843 FRMD5Q7Z6J6 570 aa7.83□□□□□ -1.16
SDCBP-210ENST00000522843 ADSSL1Q8N142 457 aa7.83□□□□□ -1.16
SDCBP-210ENST00000522843 TMEM57Q8N5G2 664 aa7.83□□□□□ -1.16
SDCBP-210ENST00000522843 TMEM105Q8N8V8 129 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 97.4 ms