RNA–Protein interactions for RNA: ENST00000522136.5

CLK4-210, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,955 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-210ENST00000522136 CCDC155Q8N6L0 562 aa14.61□□□□□ -0.07
CLK4-210ENST00000522136 CEP120Q8N960 986 aa14.61□□□□□ -0.07
CLK4-210ENST00000522136 FAM213AQ9BRX8 229 aa14.61□□□□□ -0.07
CLK4-210ENST00000522136 ERVK-5Q9HDB9 667 aa14.61□□□□□ -0.07
CLK4-210ENST00000522136 TMEM39AQ9NV64 488 aa14.61□□□□□ -0.07
CLK4-210ENST00000522136 MAGEC2Q9UBF1 373 aaPredicted RBP14.61□□□□□ -0.07
CLK4-210ENST00000522136 PADI3Q9ULW8 664 aa14.61□□□□□ -0.07
CLK4-210ENST00000522136 FRMD4BQ9Y2L6 1034 aa14.61□□□□□ -0.07
CLK4-210ENST00000522136 ADRB2P07550 413 aa14.6□□□□□ -0.07
CLK4-210ENST00000522136 CYP2C18P33260 490 aa14.6□□□□□ -0.07
CLK4-210ENST00000522136 NCBP1Q09161 790 aaKnown RBP14.6□□□□□ -0.07
CLK4-210ENST00000522136 MYBPC2Q14324 1141 aa14.6□□□□□ -0.07
CLK4-210ENST00000522136 NOLC1Q14978 699 aaKnown RBP eCLIP14.6□□□□□ -0.07
CLK4-210ENST00000522136 KRT31Q15323 416 aa14.6□□□□□ -0.07
CLK4-210ENST00000522136 CCDC40Q4G0X9 1142 aa14.6□□□□□ -0.07
CLK4-210ENST00000522136 CRELD2Q6UXH1 353 aaPredicted RBP14.6□□□□□ -0.07
CLK4-210ENST00000522136 FAM186BQ8IYM0 893 aa14.6□□□□□ -0.07
CLK4-210ENST00000522136 THNSL1Q8IYQ7 743 aa14.6□□□□□ -0.07
CLK4-210ENST00000522136 TET1Q8NFU7 2136 aa14.6□□□□□ -0.07
CLK4-210ENST00000522136 ABHD8Q96I13 439 aa14.6□□□□□ -0.07
CLK4-210ENST00000522136 SCLYQ96I15 445 aa14.6□□□□□ -0.07
CLK4-210ENST00000522136 EIF2AQ9BY44 585 aaKnown RBP14.6□□□□□ -0.07
CLK4-210ENST00000522136 TAB2Q9NYJ8 693 aa14.6□□□□□ -0.07
CLK4-210ENST00000522136 TBX21Q9UL17 535 aa14.6□□□□□ -0.07
CLK4-210ENST00000522136 MKI67P46013 3256 aaKnown RBP14.6□□□□□ -0.07
CLK4-210ENST00000522136 ALPK3Q96L96 1907 aa14.6□□□□□ -0.07
CLK4-210ENST00000522136 PITPNM1O00562 1244 aa14.6□□□□□ -0.07
CLK4-210ENST00000522136 GPR182O15218 404 aa14.6□□□□□ -0.07
CLK4-210ENST00000522136 NPTXRO95502 500 aa14.6□□□□□ -0.07
CLK4-210ENST00000522136 CLTBP09497 229 aa14.6□□□□□ -0.07
CLK4-210ENST00000522136 PSMC2P35998 433 aaKnown RBP14.6□□□□□ -0.07
CLK4-210ENST00000522136 TNFSF9P41273 254 aa14.6□□□□□ -0.07
CLK4-210ENST00000522136 OSTNP61366 133 aa14.6□□□□□ -0.07
CLK4-210ENST00000522136 FANCCQ00597 558 aa14.6□□□□□ -0.07
CLK4-210ENST00000522136 PAK2Q13177 524 aa14.6□□□□□ -0.07
CLK4-210ENST00000522136 PCBP1Q15365 356 aaKnown RBP eCLIP14.6□□□□□ -0.07
CLK4-210ENST00000522136 APTXQ7Z2E3 356 aaKnown RBP14.6□□□□□ -0.07
CLK4-210ENST00000522136 FAM114A1Q8IWE2 563 aa14.6□□□□□ -0.07
CLK4-210ENST00000522136 TMEM192Q8IY95 271 aa14.6□□□□□ -0.07
CLK4-210ENST00000522136 GPD1LQ8N335 351 aa14.6□□□□□ -0.07
CLK4-210ENST00000522136 TMEM174Q8WUU8 243 aa14.6□□□□□ -0.07
CLK4-210ENST00000522136 BORCS6Q96GS4 357 aa14.6□□□□□ -0.07
CLK4-210ENST00000522136 WNT8AQ9H1J5 351 aa14.6□□□□□ -0.07
CLK4-210ENST00000522136 N4BP3O15049 544 aa14.59□□□□□ -0.07
CLK4-210ENST00000522136 EXTL3O43909 919 aa14.59□□□□□ -0.07
CLK4-210ENST00000522136 FAM189A1O60320 539 aa14.59□□□□□ -0.07
CLK4-210ENST00000522136 NBNO60934 754 aa14.59□□□□□ -0.07
CLK4-210ENST00000522136 EPB41P11171 864 aaKnown RBP14.59□□□□□ -0.07
CLK4-210ENST00000522136 AXLP30530 894 aa14.59□□□□□ -0.07
CLK4-210ENST00000522136 MTIF2P46199 727 aaKnown RBP14.59□□□□□ -0.07
CLK4-210ENST00000522136 MRE11P49959 708 aa14.59□□□□□ -0.07
CLK4-210ENST00000522136 SNRNP35Q16560 246 aaKnown RBP14.59□□□□□ -0.07
CLK4-210ENST00000522136 UBXN11Q5T124 520 aa14.59□□□□□ -0.07
CLK4-210ENST00000522136 NOTUMQ6P988 496 aa14.59□□□□□ -0.07
CLK4-210ENST00000522136 FBXL18Q96ME1 805 aa14.59□□□□□ -0.07
CLK4-210ENST00000522136 NAP1L5Q96NT1 182 aaPredicted RBP14.59□□□□□ -0.07
CLK4-210ENST00000522136 VPS16Q9H269 839 aa14.59□□□□□ -0.07
CLK4-210ENST00000522136 TMX1Q9H3N1 280 aa14.59□□□□□ -0.07
CLK4-210ENST00000522136 LIMA1Q9UHB6 759 aaKnown RBP14.59□□□□□ -0.07
CLK4-210ENST00000522136 TRIM43BA6NCK2 446 aa14.58□□□□□ -0.07
CLK4-210ENST00000522136 OGTO15294 1046 aa14.58□□□□□ -0.07
CLK4-210ENST00000522136 SLC16A3O15427 465 aaKnown RBP14.58□□□□□ -0.07
CLK4-210ENST00000522136 MGEA5O60502 916 aa14.58□□□□□ -0.07
CLK4-210ENST00000522136 SERPINC1P01008 464 aa14.58□□□□□ -0.07
CLK4-210ENST00000522136 EEF1GP26641 437 aaKnown RBP14.58□□□□□ -0.07
CLK4-210ENST00000522136 WNT7BP56706 349 aa14.58□□□□□ -0.07
CLK4-210ENST00000522136 SLC27A1Q6PCB7 646 aa14.58□□□□□ -0.07
CLK4-210ENST00000522136 PLEKHO2Q8TD55 490 aa14.58□□□□□ -0.07
CLK4-210ENST00000522136 TRIM43Q96BQ3 446 aaPredicted RBP14.58□□□□□ -0.07
CLK4-210ENST00000522136 TUBGCP2Q9BSJ2 902 aa14.58□□□□□ -0.07
CLK4-210ENST00000522136 MKNK1Q9BUB5 465 aa14.58□□□□□ -0.07
CLK4-210ENST00000522136 PRDM5Q9NQX1 630 aaPredicted RBP14.58□□□□□ -0.07
CLK4-210ENST00000522136 IFNKQ9P0W0 207 aa14.58□□□□□ -0.07
CLK4-210ENST00000522136 ARMCX3Q9UH62 379 aaPredicted RBP14.58□□□□□ -0.07
CLK4-210ENST00000522136 HES2Q9Y543 173 aa14.58□□□□□ -0.07
CLK4-210ENST00000522136 GNA14O95837 355 aa14.58□□□□□ -0.08
CLK4-210ENST00000522136 MCF2P10911 925 aa14.58□□□□□ -0.08
CLK4-210ENST00000522136 ITGB8P26012 769 aa14.58□□□□□ -0.08
CLK4-210ENST00000522136 COPB1P53618 953 aaKnown RBP14.58□□□□□ -0.08
CLK4-210ENST00000522136 MARSP56192 900 aaKnown RBP14.58□□□□□ -0.08
CLK4-210ENST00000522136 SPAG1Q07617 926 aa14.58□□□□□ -0.08
CLK4-210ENST00000522136 TWF2Q6IBS0 349 aaKnown RBP14.58□□□□□ -0.08
CLK4-210ENST00000522136 FRMD5Q7Z6J6 570 aa14.58□□□□□ -0.08
CLK4-210ENST00000522136 TRIM59Q8IWR1 403 aa14.58□□□□□ -0.08
CLK4-210ENST00000522136 USP38Q8NB14 1042 aa14.58□□□□□ -0.08
CLK4-210ENST00000522136 ADPGKQ9BRR6 497 aa14.58□□□□□ -0.08
CLK4-210ENST00000522136 IFIH1Q9BYX4 1025 aaKnown RBP14.58□□□□□ -0.08
CLK4-210ENST00000522136 SQORQ9Y6N5 450 aa14.58□□□□□ -0.08
CLK4-210ENST00000522136 TANC1Q9C0D5 1861 aa14.57□□□□□ -0.08
CLK4-210ENST00000522136 ZNF233A6NK53 670 aa14.57□□□□□ -0.08
CLK4-210ENST00000522136 CCDC85CA6NKD9 419 aa14.57□□□□□ -0.08
CLK4-210ENST00000522136 LDHAP00338 332 aaKnown RBP14.57□□□□□ -0.08
CLK4-210ENST00000522136 STAG3L1P0CL83 205 aa14.57□□□□□ -0.08
CLK4-210ENST00000522136 PRKCSHP14314 528 aaPredicted RBP14.57□□□□□ -0.08
CLK4-210ENST00000522136 DLG4P78352 724 aa14.57□□□□□ -0.08
CLK4-210ENST00000522136 PTPN21Q16825 1174 aa14.57□□□□□ -0.08
CLK4-210ENST00000522136 TRIP11Q15643 1979 aa14.57□□□□□ -0.08
CLK4-210ENST00000522136 LRRC10BA6NIK2 292 aa14.56□□□□□ -0.08
CLK4-210ENST00000522136 KIAA0391O15091 583 aaKnown RBP14.56□□□□□ -0.08
CLK4-210ENST00000522136 TRIM49P0CI25 452 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms