RNA–Protein interactions for RNA: ENST00000521713.1

USP42-207, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 5

Gene USP42, Length 5,017 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-207ENST00000521713 PRDM5Q9NQX1 630 aaPredicted RBP17.22■□□□□ 0.35
USP42-207ENST00000521713 LRRC53A6NM62 1247 aa17.21■□□□□ 0.35
USP42-207ENST00000521713 M0QYV0 167 aa17.21■□□□□ 0.35
USP42-207ENST00000521713 PLS3P13797 630 aa17.21■□□□□ 0.35
USP42-207ENST00000521713 PDCLQ13371 301 aa17.21■□□□□ 0.35
USP42-207ENST00000521713 THOC5Q13769 683 aaKnown RBP17.21■□□□□ 0.35
USP42-207ENST00000521713 DRAP1Q14919 205 aaPredicted RBP17.21■□□□□ 0.35
USP42-207ENST00000521713 EMSYQ7Z589 1322 aa17.21■□□□□ 0.35
USP42-207ENST00000521713 HOXA10P31260 410 aaPredicted RBP17.21■□□□□ 0.35
USP42-207ENST00000521713 KPNA2P52292 529 aaKnown RBP17.21■□□□□ 0.35
USP42-207ENST00000521713 PRKCEQ02156 737 aa17.21■□□□□ 0.35
USP42-207ENST00000521713 RNF219Q5W0B1 726 aaPredicted RBP17.21■□□□□ 0.35
USP42-207ENST00000521713 TARSL2A2RTX5 802 aaKnown RBP17.21■□□□□ 0.35
USP42-207ENST00000521713 GMNCA6NCL1 334 aa17.21■□□□□ 0.35
USP42-207ENST00000521713 RPA1P27694 616 aa17.21■□□□□ 0.35
USP42-207ENST00000521713 PPARGP37231 505 aaPredicted RBP17.21■□□□□ 0.35
USP42-207ENST00000521713 EMC2Q15006 297 aa17.21■□□□□ 0.35
USP42-207ENST00000521713 NRBF2Q96F24 287 aa17.21■□□□□ 0.35
USP42-207ENST00000521713 OLFM3Q96PB7 478 aa17.21■□□□□ 0.35
USP42-207ENST00000521713 SERPINI1Q99574 410 aa17.21■□□□□ 0.35
USP42-207ENST00000521713 ABHD10Q9NUJ1 306 aa17.21■□□□□ 0.35
USP42-207ENST00000521713 A0A1W2PQC6 194 aa17.21■□□□□ 0.34
USP42-207ENST00000521713 PPP6R3Q5H9R7 873 aaPredicted RBP17.21■□□□□ 0.34
USP42-207ENST00000521713 GNASQ5JWF2 1037 aa17.21■□□□□ 0.34
USP42-207ENST00000521713 TXNRD3Q86VQ6 643 aa17.21■□□□□ 0.34
USP42-207ENST00000521713 GFM2Q969S9 779 aaKnown RBP17.21■□□□□ 0.34
USP42-207ENST00000521713 TMEM143Q96AN5 459 aa17.21■□□□□ 0.34
USP42-207ENST00000521713 C11orf70Q9BRQ4 267 aa17.21■□□□□ 0.34
USP42-207ENST00000521713 ZWILCHQ9H900 591 aa17.21■□□□□ 0.34
USP42-207ENST00000521713 TMX2Q9Y320 296 aa17.21■□□□□ 0.34
USP42-207ENST00000521713 RBP5P82980 135 aa17.2■□□□□ 0.34
USP42-207ENST00000521713 TMED1Q13445 227 aa17.2■□□□□ 0.34
USP42-207ENST00000521713 PDIK1LQ8N165 341 aa17.2■□□□□ 0.34
USP42-207ENST00000521713 DAGLBQ8NCG7 672 aa17.2■□□□□ 0.34
USP42-207ENST00000521713 GMCL1Q96IK5 515 aa17.2■□□□□ 0.34
USP42-207ENST00000521713 GLT1D1Q96MS3 346 aa17.2■□□□□ 0.34
USP42-207ENST00000521713 NWD1Q149M9 1564 aa17.2■□□□□ 0.34
USP42-207ENST00000521713 POC1B-GALNT4F8VUJ3 575 aa17.2■□□□□ 0.34
USP42-207ENST00000521713 MYBL1P10243 752 aa17.2■□□□□ 0.34
USP42-207ENST00000521713 CPB1P15086 417 aa17.2■□□□□ 0.34
USP42-207ENST00000521713 CAPRIN2Q6IMN6 1127 aaKnown RBP17.2■□□□□ 0.34
USP42-207ENST00000521713 RNF180Q86T96 592 aa17.2■□□□□ 0.34
USP42-207ENST00000521713 ACER1Q8TDN7 264 aa17.2■□□□□ 0.34
USP42-207ENST00000521713 KCNH7Q9NS40 1196 aa17.2■□□□□ 0.34
USP42-207ENST00000521713 PRMT7Q9NVM4 692 aaPredicted RBP17.2■□□□□ 0.34
USP42-207ENST00000521713 GAS2O43903 313 aaKnown RBP17.2■□□□□ 0.34
USP42-207ENST00000521713 ESRRAP11474 423 aaPredicted RBP17.2■□□□□ 0.34
USP42-207ENST00000521713 CYP2C9P11712 490 aa17.2■□□□□ 0.34
USP42-207ENST00000521713 NR1H3Q13133 447 aa17.2■□□□□ 0.34
USP42-207ENST00000521713 RAB44Q7Z6P3 723 aaPredicted RBP17.2■□□□□ 0.34
USP42-207ENST00000521713 PXDNQ92626 1479 aa17.2■□□□□ 0.34
USP42-207ENST00000521713 RAPH1Q70E73 1250 aa17.2■□□□□ 0.34
USP42-207ENST00000521713 TEX2Q8IWB9 1127 aa17.2■□□□□ 0.34
USP42-207ENST00000521713 TRIM56Q9BRZ2 755 aaKnown RBP17.2■□□□□ 0.34
USP42-207ENST00000521713 MAD2L2Q9UI95 211 aa17.2■□□□□ 0.34
USP42-207ENST00000521713 SYNGAP1Q96PV0 1343 aa17.19■□□□□ 0.34
USP42-207ENST00000521713 FAM205CA6NFA0 338 aa17.19■□□□□ 0.34
USP42-207ENST00000521713 TRIM49P0CI25 452 aa17.19■□□□□ 0.34
USP42-207ENST00000521713 TRIM49CP0CI26 452 aa17.19■□□□□ 0.34
USP42-207ENST00000521713 FXR2P51116 673 aaKnown RBP eCLIP17.19■□□□□ 0.34
USP42-207ENST00000521713 SNRPFP62306 86 aaKnown RBP17.19■□□□□ 0.34
USP42-207ENST00000521713 STILQ15468 1287 aa17.19■□□□□ 0.34
USP42-207ENST00000521713 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP17.19■□□□□ 0.34
USP42-207ENST00000521713 PDZD8Q8NEN9 1154 aa17.19■□□□□ 0.34
USP42-207ENST00000521713 HSPH1Q92598 858 aa17.19■□□□□ 0.34
USP42-207ENST00000521713 PIDD1Q9HB75 910 aa17.19■□□□□ 0.34
USP42-207ENST00000521713 PODXLO00592 558 aa17.19■□□□□ 0.34
USP42-207ENST00000521713 TADA3O75528 432 aa17.19■□□□□ 0.34
USP42-207ENST00000521713 PSMC1P62191 440 aaKnown RBP17.19■□□□□ 0.34
USP42-207ENST00000521713 NXNQ6DKJ4 435 aa17.19■□□□□ 0.34
USP42-207ENST00000521713 ZNF746Q6NUN9 644 aaPredicted RBP17.19■□□□□ 0.34
USP42-207ENST00000521713 TMEM60Q9H2L4 133 aa17.19■□□□□ 0.34
USP42-207ENST00000521713 PLAAQ9Y263 795 aa17.19■□□□□ 0.34
USP42-207ENST00000521713 BRD2P25440 801 aaKnown RBP17.19■□□□□ 0.34
USP42-207ENST00000521713 LLGL1Q15334 1064 aa17.19■□□□□ 0.34
USP42-207ENST00000521713 PLEKHH3Q7Z736 793 aa17.19■□□□□ 0.34
USP42-207ENST00000521713 PRPF31Q8WWY3 499 aaKnown RBP17.19■□□□□ 0.34
USP42-207ENST00000521713 KLC4Q9NSK0 619 aa17.19■□□□□ 0.34
USP42-207ENST00000521713 FBXO28Q9NVF7 368 aa17.19■□□□□ 0.34
USP42-207ENST00000521713 RPS6KA5O75582 802 aa17.19■□□□□ 0.34
USP42-207ENST00000521713 KRT80Q6KB66 452 aa17.19■□□□□ 0.34
USP42-207ENST00000521713 PASD1Q8IV76 773 aa17.19■□□□□ 0.34
USP42-207ENST00000521713 CXorf38Q8TB03 319 aa17.19■□□□□ 0.34
USP42-207ENST00000521713 LBHD1Q9BQE6 289 aaPredicted RBP17.19■□□□□ 0.34
USP42-207ENST00000521713 REEP2Q9BRK0 252 aa17.19■□□□□ 0.34
USP42-207ENST00000521713 HSPBP1Q9NZL4 362 aa17.19■□□□□ 0.34
USP42-207ENST00000521713 MMEP08473 750 aa17.18■□□□□ 0.34
USP42-207ENST00000521713 KRT7P08729 469 aa17.18■□□□□ 0.34
USP42-207ENST00000521713 GGCXP38435 758 aa17.18■□□□□ 0.34
USP42-207ENST00000521713 MSH2P43246 934 aa17.18■□□□□ 0.34
USP42-207ENST00000521713 RCN2Q14257 317 aa17.18■□□□□ 0.34
USP42-207ENST00000521713 TAAR1Q96RJ0 339 aa17.18■□□□□ 0.34
USP42-207ENST00000521713 RASSF10A6NK89 507 aa17.18■□□□□ 0.34
USP42-207ENST00000521713 CXCR5P32302 372 aa17.18■□□□□ 0.34
USP42-207ENST00000521713 MMEL1Q495T6 779 aa17.18■□□□□ 0.34
USP42-207ENST00000521713 GMCL1P1Q8NEA9 526 aa17.18■□□□□ 0.34
USP42-207ENST00000521713 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP17.18■□□□□ 0.34
USP42-207ENST00000521713 DPF2Q92785 391 aa17.18■□□□□ 0.34
USP42-207ENST00000521713 SLC38A7Q9NVC3 462 aa17.18■□□□□ 0.34
USP42-207ENST00000521713 ZKSCAN7Q9P0L1 754 aaPredicted RBP17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms