RNA–Protein interactions for RNA: ENST00000521640.5

CTNNA1-228, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-228ENST00000521640 ARHGEF16Q5VV41 709 aa7.32□□□□□ -1.24
CTNNA1-228ENST00000521640 PAPD7Q5XG87 772 aaKnown RBP7.32□□□□□ -1.24
CTNNA1-228ENST00000521640 LYPD4Q6UWN0 246 aa7.32□□□□□ -1.24
CTNNA1-228ENST00000521640 RSRC2Q7L4I2 434 aaKnown RBP7.32□□□□□ -1.24
CTNNA1-228ENST00000521640 SRGAP1Q7Z6B7 1085 aa7.32□□□□□ -1.24
CTNNA1-228ENST00000521640 KIAA1328Q86T90 577 aa7.32□□□□□ -1.24
CTNNA1-228ENST00000521640 NELFCDQ8IXH7 590 aa7.32□□□□□ -1.24
CTNNA1-228ENST00000521640 MYCT1Q8N699 235 aa7.32□□□□□ -1.24
CTNNA1-228ENST00000521640 IL31RAQ8NI17 732 aa7.32□□□□□ -1.24
CTNNA1-228ENST00000521640 UBE2Q2Q8WVN8 375 aa7.32□□□□□ -1.24
CTNNA1-228ENST00000521640 RUBCNQ92622 972 aa7.32□□□□□ -1.24
CTNNA1-228ENST00000521640 GOLGA1Q92805 767 aa7.32□□□□□ -1.24
CTNNA1-228ENST00000521640 ATP6V0A1Q93050 837 aa7.32□□□□□ -1.24
CTNNA1-228ENST00000521640 SLC35C1Q96A29 364 aa7.32□□□□□ -1.24
CTNNA1-228ENST00000521640 JAKMIP2Q96AA8 810 aa7.32□□□□□ -1.24
CTNNA1-228ENST00000521640 ATG4CQ96DT6 458 aa7.32□□□□□ -1.24
CTNNA1-228ENST00000521640 CCDC94Q9BW85 323 aaPredicted RBP7.32□□□□□ -1.24
CTNNA1-228ENST00000521640 FGFBP2Q9BYJ0 223 aa7.32□□□□□ -1.24
CTNNA1-228ENST00000521640 GBP3Q9H0R5 595 aa7.32□□□□□ -1.24
CTNNA1-228ENST00000521640 GANQ9H2C0 597 aa7.32□□□□□ -1.24
CTNNA1-228ENST00000521640 ZHX3Q9H4I2 956 aa7.32□□□□□ -1.24
CTNNA1-228ENST00000521640 LZTFL1Q9NQ48 299 aa7.32□□□□□ -1.24
CTNNA1-228ENST00000521640 FAM207AQ9NSI2 230 aaPredicted RBP7.32□□□□□ -1.24
CTNNA1-228ENST00000521640 ARHGAP20Q9P2F6 1191 aa7.32□□□□□ -1.24
CTNNA1-228ENST00000521640 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.32□□□□□ -1.24
CTNNA1-228ENST00000521640 USP20Q9Y2K6 914 aa7.32□□□□□ -1.24
CTNNA1-228ENST00000521640 PPME1Q9Y570 386 aa7.32□□□□□ -1.24
CTNNA1-228ENST00000521640 ZHX2Q9Y6X8 837 aa7.32□□□□□ -1.24
CTNNA1-228ENST00000521640 ARID2Q68CP9 1835 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 MYH11P35749 1972 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 ASTN2O75129 1339 aaPredicted RBP7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 LRRC53A6NM62 1247 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 RSPH10B2B2RC85 870 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 CHMP2AO43633 222 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 AKAP3O75969 853 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 NOL4O94818 638 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 PRPF6O94906 941 aaKnown RBP7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 RSPH10BP0C881 870 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 FGFR3P22607 806 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 KLK7P49862 253 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 NCKAP1LP55160 1127 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 GTF2BQ00403 316 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 PDE4CQ08493 712 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 ELF2Q15723 593 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 OCLNQ16625 522 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 EXOC3L4Q17RC7 722 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 ODR4Q5SWX8 454 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 CCDC122Q5T0U0 273 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 HGSNATQ68CP4 663 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 SNRNP48Q6IEG0 339 aaKnown RBP7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 FIGNL1Q6PIW4 674 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 SLC30A10Q6XR72 485 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 GBP6Q6ZN66 633 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 INTS8Q75QN2 995 aaKnown RBP7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 RRAGAQ7L523 313 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 OTUD6AQ7L8S5 288 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 TRAPPC11Q7Z392 1133 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 FAM186BQ8IYM0 893 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 CPXCR1Q8N123 301 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 SLC35F6Q8N357 371 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 TRPM4Q8TD43 1214 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 PIGOQ8TEQ8 1089 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 KIFAP3Q92845 792 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 ALS2CR12Q96Q35 445 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 ACCSQ96QU6 501 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 TAAR1Q96RJ0 339 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 LSM14BQ9BX40 385 aaKnown RBP7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 CARD6Q9BX69 1037 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 MOV10L1Q9BXT6 1211 aaKnown RBP7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 IFIH1Q9BYX4 1025 aaKnown RBP7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 DEF6Q9H4E7 631 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 SPON1Q9HCB6 807 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 AGPAT3Q9NRZ7 376 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 CYP39A1Q9NYL5 469 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 TBC1D7Q9P0N9 293 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 WRAP73Q9P2S5 460 aaPredicted RBP7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 INTUQ9ULD6 942 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 EXOC7Q9UPT5 735 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 USTQ9Y2C2 406 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 PCDHA10Q9Y5I2 948 aa7.31□□□□□ -1.24
CTNNA1-228ENST00000521640 LRRC37A2A6NM11 1700 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 CARNS1A5YM72 827 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 CXCL11O14625 94 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 KHNYNO15037 678 aaKnown RBP7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 KIAA0391O15091 583 aaKnown RBP7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 EPHB6O15197 1021 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 AKR1B10O60218 316 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 HIP1RO75146 1068 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 TACC1O75410 805 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 PSAPP07602 524 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 CCDC172P0C7W6 258 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 UCHL3P15374 230 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 KCNA2P16389 499 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 EIF2AK2P19525 551 aaKnown RBP7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 CD33P20138 364 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 MCM3P25205 808 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 YWHABP31946 246 aaKnown RBP7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 EIF4A3P38919 411 aaKnown RBP7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 HMGCS2P54868 508 aa7.3□□□□□ -1.24
CTNNA1-228ENST00000521640 CHMP4BP1P59074 171 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms