RNA–Protein interactions for RNA: ENST00000521167.1

TRAPPC9-209, Transcript of trafficking protein particle complex 9, humanhuman

TSL 4

Gene TRAPPC9, Length 545 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-209ENST00000521167 LONRF3Q496Y0 759 aa11.48□□□□□ -0.57
TRAPPC9-209ENST00000521167 TMEM119Q4V9L6 283 aa11.48□□□□□ -0.57
TRAPPC9-209ENST00000521167 KCNK18Q7Z418 384 aa11.48□□□□□ -0.57
TRAPPC9-209ENST00000521167 HSCBQ8IWL3 235 aa11.48□□□□□ -0.57
TRAPPC9-209ENST00000521167 EFHBQ8N7U6 833 aa11.48□□□□□ -0.57
TRAPPC9-209ENST00000521167 ADAMTS19Q8TE59 1207 aa11.48□□□□□ -0.57
TRAPPC9-209ENST00000521167 DRC1Q96MC2 740 aa11.48□□□□□ -0.57
TRAPPC9-209ENST00000521167 FAM193BQ96PV7 902 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC9-209ENST00000521167 CDCA3Q99618 268 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC9-209ENST00000521167 TMEM175Q9BSA9 504 aa11.48□□□□□ -0.57
TRAPPC9-209ENST00000521167 EIF2AQ9BY44 585 aaKnown RBP11.48□□□□□ -0.57
TRAPPC9-209ENST00000521167 ADAM33Q9BZ11 813 aa11.48□□□□□ -0.57
TRAPPC9-209ENST00000521167 TRIM6Q9C030 488 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC9-209ENST00000521167 CCDC113Q9H0I3 377 aa11.48□□□□□ -0.57
TRAPPC9-209ENST00000521167 TMEM134Q9H6X4 195 aa11.48□□□□□ -0.57
TRAPPC9-209ENST00000521167 CLDND1Q9NY35 253 aa11.48□□□□□ -0.57
TRAPPC9-209ENST00000521167 STK39Q9UEW8 545 aa11.48□□□□□ -0.57
TRAPPC9-209ENST00000521167 MTMR6Q9Y217 621 aa11.48□□□□□ -0.57
TRAPPC9-209ENST00000521167 INPP5FQ9Y2H2 1132 aa11.48□□□□□ -0.57
TRAPPC9-209ENST00000521167 RBM19Q9Y4C8 960 aaKnown RBP11.48□□□□□ -0.57
TRAPPC9-209ENST00000521167 MORC2Q9Y6X9 1032 aaPredicted RBP11.48□□□□□ -0.57
TRAPPC9-209ENST00000521167 K7ERI5 159 aa11.47□□□□□ -0.57
TRAPPC9-209ENST00000521167 B4GALT5O43286 388 aa11.47□□□□□ -0.57
TRAPPC9-209ENST00000521167 HIP1RO75146 1068 aa11.47□□□□□ -0.57
TRAPPC9-209ENST00000521167 ZC3H11AO75152 810 aaKnown RBP eCLIP11.47□□□□□ -0.57
TRAPPC9-209ENST00000521167 NPTXRO95502 500 aa11.47□□□□□ -0.57
TRAPPC9-209ENST00000521167 GUCY2CP25092 1073 aa11.47□□□□□ -0.57
TRAPPC9-209ENST00000521167 LTBRP36941 435 aa11.47□□□□□ -0.57
TRAPPC9-209ENST00000521167 PTPAQ15257 358 aa11.47□□□□□ -0.57
TRAPPC9-209ENST00000521167 DDX53Q86TM3 631 aaKnown RBP11.47□□□□□ -0.57
TRAPPC9-209ENST00000521167 DAW1Q8N136 415 aa11.47□□□□□ -0.57
TRAPPC9-209ENST00000521167 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.47□□□□□ -0.57
TRAPPC9-209ENST00000521167 TMEM169Q96HH4 297 aa11.47□□□□□ -0.57
TRAPPC9-209ENST00000521167 IGSF21Q96ID5 467 aa11.47□□□□□ -0.57
TRAPPC9-209ENST00000521167 ADPGKQ9BRR6 497 aa11.47□□□□□ -0.57
TRAPPC9-209ENST00000521167 NTPCRQ9BSD7 190 aaKnown RBP11.47□□□□□ -0.57
TRAPPC9-209ENST00000521167 RUSC1Q9BVN2 902 aa11.47□□□□□ -0.57
TRAPPC9-209ENST00000521167 IGFLR1Q9H665 355 aa11.47□□□□□ -0.57
TRAPPC9-209ENST00000521167 TLE6Q9H808 572 aa11.47□□□□□ -0.57
TRAPPC9-209ENST00000521167 POLD4Q9HCU8 107 aa11.47□□□□□ -0.57
TRAPPC9-209ENST00000521167 FAM50BQ9Y247 325 aa11.47□□□□□ -0.57
TRAPPC9-209ENST00000521167 VPS9D1Q9Y2B5 631 aa11.47□□□□□ -0.57
TRAPPC9-209ENST00000521167 PCDHGA10Q9Y5H3 936 aa11.47□□□□□ -0.57
TRAPPC9-209ENST00000521167 CLIC4Q9Y696 253 aa11.47□□□□□ -0.57
TRAPPC9-209ENST00000521167 GRXCR2A6NFK2 248 aa11.46□□□□□ -0.57
TRAPPC9-209ENST00000521167 ARL5CA6NH57 179 aa11.46□□□□□ -0.57
TRAPPC9-209ENST00000521167 CCDC169A6NNP5 214 aa11.46□□□□□ -0.57
TRAPPC9-209ENST00000521167 DPYSL4O14531 572 aa11.46□□□□□ -0.57
TRAPPC9-209ENST00000521167 PLA2G4BP0C869 781 aa11.46□□□□□ -0.57
TRAPPC9-209ENST00000521167 PBX3P40426 434 aa11.46□□□□□ -0.57
TRAPPC9-209ENST00000521167 NPTX2P47972 431 aa11.46□□□□□ -0.57
TRAPPC9-209ENST00000521167 NRIP1P48552 1158 aa11.46□□□□□ -0.57
TRAPPC9-209ENST00000521167 SLC12A3P55017 1021 aa11.46□□□□□ -0.57
TRAPPC9-209ENST00000521167 PEX3P56589 373 aa11.46□□□□□ -0.57
TRAPPC9-209ENST00000521167 MAPK7Q13164 816 aa11.46□□□□□ -0.57
TRAPPC9-209ENST00000521167 DMP1Q13316 513 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC9-209ENST00000521167 TMEM132AQ24JP5 1023 aa11.46□□□□□ -0.57
TRAPPC9-209ENST00000521167 EP400NLQ6ZTU2 488 aa11.46□□□□□ -0.57
TRAPPC9-209ENST00000521167 TMC7Q7Z402 723 aa11.46□□□□□ -0.57
TRAPPC9-209ENST00000521167 APBB1IPQ7Z5R6 666 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC9-209ENST00000521167 ADGRD2Q7Z7M1 963 aa11.46□□□□□ -0.57
TRAPPC9-209ENST00000521167 ZNF280BQ86YH2 543 aa11.46□□□□□ -0.57
TRAPPC9-209ENST00000521167 SPIRE2Q8WWL2 714 aa11.46□□□□□ -0.57
TRAPPC9-209ENST00000521167 UHRF1Q96T88 793 aaPredicted RBP11.46□□□□□ -0.57
TRAPPC9-209ENST00000521167 GAD1Q99259 594 aa11.46□□□□□ -0.57
TRAPPC9-209ENST00000521167 PLIN2Q99541 437 aa11.46□□□□□ -0.57
TRAPPC9-209ENST00000521167 TCF25Q9BQ70 676 aa11.46□□□□□ -0.57
TRAPPC9-209ENST00000521167 CCSER1Q9C0I3 900 aa11.46□□□□□ -0.57
TRAPPC9-209ENST00000521167 PDZD7Q9H5P4 517 aa11.46□□□□□ -0.57
TRAPPC9-209ENST00000521167 KMT5AQ9NQR1 393 aa11.46□□□□□ -0.57
TRAPPC9-209ENST00000521167 ENTPD7Q9NQZ7 604 aa11.46□□□□□ -0.57
TRAPPC9-209ENST00000521167 FAN1Q9Y2M0 1017 aa11.46□□□□□ -0.57
TRAPPC9-209ENST00000521167 HES2Q9Y543 173 aa11.46□□□□□ -0.57
TRAPPC9-209ENST00000521167 SRPRBQ9Y5M8 271 aaKnown RBP11.46□□□□□ -0.57
TRAPPC9-209ENST00000521167 MTCL1Q9Y4B5 1905 aaKnown RBP11.45□□□□□ -0.58
TRAPPC9-209ENST00000521167 NT5C1B-RDH14C9J2C7 533 aa11.45□□□□□ -0.58
TRAPPC9-209ENST00000521167 TNFRSF10AO00220 468 aa11.45□□□□□ -0.58
TRAPPC9-209ENST00000521167 DDHD2O94830 711 aa11.45□□□□□ -0.58
TRAPPC9-209ENST00000521167 POMCP01189 267 aa11.45□□□□□ -0.58
TRAPPC9-209ENST00000521167 SSBP05455 408 aaKnown RBP eCLIP11.45□□□□□ -0.58
TRAPPC9-209ENST00000521167 PLS3P13797 630 aa11.45□□□□□ -0.58
TRAPPC9-209ENST00000521167 SCP2P22307 547 aa11.45□□□□□ -0.58
TRAPPC9-209ENST00000521167 GTF2F1P35269 517 aaKnown RBP eCLIP11.45□□□□□ -0.58
TRAPPC9-209ENST00000521167 SLC11A1P49279 550 aa11.45□□□□□ -0.58
TRAPPC9-209ENST00000521167 AFF1P51825 1210 aaKnown RBP11.45□□□□□ -0.58
TRAPPC9-209ENST00000521167 SMTNP53814 917 aa11.45□□□□□ -0.58
TRAPPC9-209ENST00000521167 GIT2Q14161 759 aa11.45□□□□□ -0.58
TRAPPC9-209ENST00000521167 SMC1AQ14683 1233 aaKnown RBP11.45□□□□□ -0.58
TRAPPC9-209ENST00000521167 SLC39A14Q15043 492 aa11.45□□□□□ -0.58
TRAPPC9-209ENST00000521167 DUSP6Q16828 381 aa11.45□□□□□ -0.58
TRAPPC9-209ENST00000521167 DCAF4L1Q3SXM0 396 aa11.45□□□□□ -0.58
TRAPPC9-209ENST00000521167 NT5DC1Q5TFE4 455 aa11.45□□□□□ -0.58
TRAPPC9-209ENST00000521167 PTCRAQ6ISU1 281 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC9-209ENST00000521167 TMEM184AQ6ZMB5 413 aa11.45□□□□□ -0.58
TRAPPC9-209ENST00000521167 CDR2LQ86X02 465 aaPredicted RBP11.45□□□□□ -0.58
TRAPPC9-209ENST00000521167 COLGALT2Q8IYK4 626 aa11.45□□□□□ -0.58
TRAPPC9-209ENST00000521167 MRPL43Q8N983 215 aaKnown RBP11.45□□□□□ -0.58
TRAPPC9-209ENST00000521167 APOL6Q9BWW8 343 aa11.45□□□□□ -0.58
TRAPPC9-209ENST00000521167 GBP3Q9H0R5 595 aa11.45□□□□□ -0.58
TRAPPC9-209ENST00000521167 NXF3Q9H4D5 531 aaKnown RBP11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms