RNA–Protein interactions for RNA: ENST00000520804.1

PABPC1-215, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 493 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-215ENST00000520804 AKAP5P24588 427 aa21.77■■□□□ 1.08
PABPC1-215ENST00000520804 PPP4R3CPQ6ZMV5 832 aa21.77■■□□□ 1.08
PABPC1-215ENST00000520804 PLCD3Q8N3E9 789 aa21.77■■□□□ 1.08
PABPC1-215ENST00000520804 COLEC11Q9BWP8 271 aa21.77■■□□□ 1.08
PABPC1-215ENST00000520804 FOXP1Q9H334 677 aaPredicted RBP21.77■■□□□ 1.08
PABPC1-215ENST00000520804 ZMYM2Q9UBW7 1377 aa21.76■■□□□ 1.07
PABPC1-215ENST00000520804 BRD1O95696 1058 aa21.76■■□□□ 1.07
PABPC1-215ENST00000520804 OR52Z1P0C646 297 aa21.76■■□□□ 1.07
PABPC1-215ENST00000520804 RPA1P27694 616 aa21.76■■□□□ 1.07
PABPC1-215ENST00000520804 GLUD2P49448 558 aa21.76■■□□□ 1.07
PABPC1-215ENST00000520804 MRE11P49959 708 aa21.76■■□□□ 1.07
PABPC1-215ENST00000520804 VCPP55072 806 aaKnown RBP21.76■■□□□ 1.07
PABPC1-215ENST00000520804 ZNF174Q15697 407 aa21.76■■□□□ 1.07
PABPC1-215ENST00000520804 KIAA0319Q5VV43 1072 aa21.76■■□□□ 1.07
PABPC1-215ENST00000520804 CDCA2Q69YH5 1023 aaPredicted RBP21.76■■□□□ 1.07
PABPC1-215ENST00000520804 POTEGQ6S5H5 508 aa21.76■■□□□ 1.07
PABPC1-215ENST00000520804 ERMNQ8TAM6 284 aa21.76■■□□□ 1.07
PABPC1-215ENST00000520804 PRIMPOLQ96LW4 560 aa21.76■■□□□ 1.07
PABPC1-215ENST00000520804 FZD8Q9H461 694 aa21.76■■□□□ 1.07
PABPC1-215ENST00000520804 PRMT7Q9NVM4 692 aaPredicted RBP21.76■■□□□ 1.07
PABPC1-215ENST00000520804 F8W810 466 aa21.75■■□□□ 1.07
PABPC1-215ENST00000520804 TEX28O15482 410 aa21.75■■□□□ 1.07
PABPC1-215ENST00000520804 ADH1AP07327 375 aa21.75■■□□□ 1.07
PABPC1-215ENST00000520804 PTPN5P54829 565 aa21.75■■□□□ 1.07
PABPC1-215ENST00000520804 FAM187BQ17R55 369 aa21.75■■□□□ 1.07
PABPC1-215ENST00000520804 C15orf39Q6ZRI6 1047 aa21.75■■□□□ 1.07
PABPC1-215ENST00000520804 ZBTB8OSQ8IWT0 167 aa21.75■■□□□ 1.07
PABPC1-215ENST00000520804 FBXO18Q8NFZ0 1043 aa21.75■■□□□ 1.07
PABPC1-215ENST00000520804 RXFP1Q9HBX9 757 aa21.75■■□□□ 1.07
PABPC1-215ENST00000520804 CHST7Q9NS84 486 aa21.75■■□□□ 1.07
PABPC1-215ENST00000520804 KLK14Q9P0G3 267 aa21.75■■□□□ 1.07
PABPC1-215ENST00000520804 LIMD1Q9UGP4 676 aa21.75■■□□□ 1.07
PABPC1-215ENST00000520804 MYO10Q9HD67 2058 aa21.75■■□□□ 1.07
PABPC1-215ENST00000520804 ASGR2P07307 311 aa21.74■■□□□ 1.07
PABPC1-215ENST00000520804 AVPR2P30518 371 aa21.74■■□□□ 1.07
PABPC1-215ENST00000520804 HMGN5P82970 282 aaKnown RBP21.74■■□□□ 1.07
PABPC1-215ENST00000520804 DSG1Q02413 1049 aa21.74■■□□□ 1.07
PABPC1-215ENST00000520804 GRIK3Q13003 919 aa21.74■■□□□ 1.07
PABPC1-215ENST00000520804 TTC38Q5R3I4 469 aa21.74■■□□□ 1.07
PABPC1-215ENST00000520804 PADI6Q6TGC4 694 aa21.74■■□□□ 1.07
PABPC1-215ENST00000520804 CCDC149Q6ZUS6 474 aa21.74■■□□□ 1.07
PABPC1-215ENST00000520804 ZSCAN31Q96LW9 406 aaPredicted RBP21.74■■□□□ 1.07
PABPC1-215ENST00000520804 C2orf40Q9H1Z8 148 aa21.74■■□□□ 1.07
PABPC1-215ENST00000520804 SMOC2Q9H3U7 446 aa21.74■■□□□ 1.07
PABPC1-215ENST00000520804 MAN1C1Q9NR34 630 aa21.74■■□□□ 1.07
PABPC1-215ENST00000520804 PARP2Q9UGN5 583 aa21.74■■□□□ 1.07
PABPC1-215ENST00000520804 PLXNA3P51805 1871 aa21.74■■□□□ 1.07
PABPC1-215ENST00000520804 PDGFBP01127 241 aaPredicted RBP21.73■■□□□ 1.07
PABPC1-215ENST00000520804 CYP11B2P19099 503 aa21.73■■□□□ 1.07
PABPC1-215ENST00000520804 RBM25P49756 843 aaKnown RBP21.73■■□□□ 1.07
PABPC1-215ENST00000520804 TCF15Q12870 199 aa21.73■■□□□ 1.07
PABPC1-215ENST00000520804 CMASQ8NFW8 434 aaPredicted RBP21.73■■□□□ 1.07
PABPC1-215ENST00000520804 BSNDQ8WZ55 320 aa21.73■■□□□ 1.07
PABPC1-215ENST00000520804 ACSF2Q96CM8 615 aaPredicted RBP21.73■■□□□ 1.07
PABPC1-215ENST00000520804 DPP7Q9UHL4 492 aa21.73■■□□□ 1.07
PABPC1-215ENST00000520804 C2orf16Q68DN1 1984 aa21.73■■□□□ 1.07
PABPC1-215ENST00000520804 PIEZO1Q92508 2521 aa21.73■■□□□ 1.07
PABPC1-215ENST00000520804 ARHGEF35A5YM69 484 aa21.72■■□□□ 1.07
PABPC1-215ENST00000520804 TTLL13PA6NNM8 815 aa21.72■■□□□ 1.07
PABPC1-215ENST00000520804 GLUD1P00367 558 aa21.72■■□□□ 1.07
PABPC1-215ENST00000520804 MUTP22033 750 aa21.72■■□□□ 1.07
PABPC1-215ENST00000520804 TRAPPC10P48553 1259 aa21.72■■□□□ 1.07
PABPC1-215ENST00000520804 HAUS3Q68CZ6 603 aa21.72■■□□□ 1.07
PABPC1-215ENST00000520804 FUT10Q6P4F1 479 aa21.72■■□□□ 1.07
PABPC1-215ENST00000520804 ELMSAN1Q6PJG2 1045 aa21.72■■□□□ 1.07
PABPC1-215ENST00000520804 OTOP3Q7RTS5 596 aa21.72■■□□□ 1.07
PABPC1-215ENST00000520804 NOSTRINQ8IVI9 506 aa21.72■■□□□ 1.07
PABPC1-215ENST00000520804 FAM184AQ8NB25 1140 aa21.72■■□□□ 1.07
PABPC1-215ENST00000520804 GPR62Q9BZJ7 368 aa21.72■■□□□ 1.07
PABPC1-215ENST00000520804 PDZD7Q9H5P4 517 aa21.72■■□□□ 1.07
PABPC1-215ENST00000520804 ADAM28Q9UKQ2 775 aa21.72■■□□□ 1.07
PABPC1-215ENST00000520804 N4BP3O15049 544 aa21.71■■□□□ 1.07
PABPC1-215ENST00000520804 NAMPTP43490 491 aa21.71■■□□□ 1.07
PABPC1-215ENST00000520804 PRPF4BQ13523 1007 aaKnown RBP21.71■■□□□ 1.07
PABPC1-215ENST00000520804 GNL2Q13823 731 aaKnown RBP21.71■■□□□ 1.07
PABPC1-215ENST00000520804 MAPK6Q16659 721 aa21.71■■□□□ 1.07
PABPC1-215ENST00000520804 USP41Q3LFD5 358 aa21.71■■□□□ 1.07
PABPC1-215ENST00000520804 CYP26C1Q6V0L0 522 aa21.71■■□□□ 1.07
PABPC1-215ENST00000520804 GPR65Q8IYL9 337 aa21.71■■□□□ 1.07
PABPC1-215ENST00000520804 C4orf32Q8N8J7 132 aa21.71■■□□□ 1.07
PABPC1-215ENST00000520804 B3GALT6Q96L58 329 aa21.71■■□□□ 1.07
PABPC1-215ENST00000520804 KIF2CQ99661 725 aa21.71■■□□□ 1.07
PABPC1-215ENST00000520804 RHOBTB2Q9BYZ6 727 aa21.71■■□□□ 1.07
PABPC1-215ENST00000520804 SH2B1Q9NRF2 756 aaPredicted RBP21.71■■□□□ 1.07
PABPC1-215ENST00000520804 ZDBF2Q9HCK1 2354 aa21.71■■□□□ 1.07
PABPC1-215ENST00000520804 CCDC195A0A1B0GUA6 201 aa21.7■■□□□ 1.06
PABPC1-215ENST00000520804 ACKR2O00590 384 aa21.7■■□□□ 1.06
PABPC1-215ENST00000520804 C1RP00736 705 aa21.7■■□□□ 1.06
PABPC1-215ENST00000520804 FXR2P51116 673 aaKnown RBP eCLIP21.7■■□□□ 1.06
PABPC1-215ENST00000520804 ECM1Q16610 540 aa21.7■■□□□ 1.06
PABPC1-215ENST00000520804 DEPTORQ8TB45 409 aa21.7■■□□□ 1.06
PABPC1-215ENST00000520804 HDAC7Q8WUI4 952 aa21.7■■□□□ 1.06
PABPC1-215ENST00000520804 RABGGTAQ92696 567 aa21.7■■□□□ 1.06
PABPC1-215ENST00000520804 PHOX2BQ99453 314 aa21.7■■□□□ 1.06
PABPC1-215ENST00000520804 CCDC113Q9H0I3 377 aa21.7■■□□□ 1.06
PABPC1-215ENST00000520804 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP21.7■■□□□ 1.064e-14■■□□□ 11.8
PABPC1-215ENST00000520804 SNTG2Q9NY99 539 aa21.7■■□□□ 1.06
PABPC1-215ENST00000520804 NOL7Q9UMY1 257 aaKnown RBP21.7■■□□□ 1.06
PABPC1-215ENST00000520804 TADA2AO75478 443 aa21.69■■□□□ 1.06
PABPC1-215ENST00000520804 PRKCBP05771 671 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms