RNA–Protein interactions for RNA: ENST00000520142.1

PABPC1-214, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 754 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-214ENST00000520142 CXCL16Q9H2A7 254 aa12.23□□□□□ -0.45
PABPC1-214ENST00000520142 KMT5AQ9NQR1 393 aa12.23□□□□□ -0.45
PABPC1-214ENST00000520142 SPG21Q9NZD8 308 aa12.23□□□□□ -0.45
PABPC1-214ENST00000520142 KANSL3Q9P2N6 904 aa12.23□□□□□ -0.45
PABPC1-214ENST00000520142 THEGQ9P2T0 379 aa12.23□□□□□ -0.45
PABPC1-214ENST00000520142 CCDC39Q9UFE4 941 aa12.23□□□□□ -0.45
PABPC1-214ENST00000520142 KCNG1Q9UIX4 513 aa12.23□□□□□ -0.45
PABPC1-214ENST00000520142 COG5Q9UP83 839 aa12.23□□□□□ -0.45
PABPC1-214ENST00000520142 CCDC169A6NNP5 214 aa12.22□□□□□ -0.45
PABPC1-214ENST00000520142 SLC16A4O15374 487 aa12.22□□□□□ -0.45
PABPC1-214ENST00000520142 CUTAO60888 179 aa12.22□□□□□ -0.45
PABPC1-214ENST00000520142 AKAP5P24588 427 aa12.22□□□□□ -0.45
PABPC1-214ENST00000520142 LTBRP36941 435 aa12.22□□□□□ -0.45
PABPC1-214ENST00000520142 MLH1P40692 756 aa12.22□□□□□ -0.45
PABPC1-214ENST00000520142 SLC11A1P49279 550 aa12.22□□□□□ -0.45
PABPC1-214ENST00000520142 DNM1Q05193 864 aaKnown RBP12.22□□□□□ -0.45
PABPC1-214ENST00000520142 HYAL1Q12794 435 aa12.22□□□□□ -0.45
PABPC1-214ENST00000520142 NAB2Q15742 525 aa12.22□□□□□ -0.45
PABPC1-214ENST00000520142 SPOUT1Q5T280 376 aaKnown RBP12.22□□□□□ -0.45
PABPC1-214ENST00000520142 ATF7IP2Q5U623 682 aa12.22□□□□□ -0.45
PABPC1-214ENST00000520142 THNSL1Q8IYQ7 743 aa12.22□□□□□ -0.45
PABPC1-214ENST00000520142 TMEM175Q9BSA9 504 aa12.22□□□□□ -0.45
PABPC1-214ENST00000520142 TARS2Q9BW92 718 aaKnown RBP12.22□□□□□ -0.45
PABPC1-214ENST00000520142 VN1R3Q9BXE9 311 aa12.22□□□□□ -0.45
PABPC1-214ENST00000520142 LARSQ9P2J5 1176 aaKnown RBP12.22□□□□□ -0.45
PABPC1-214ENST00000520142 PCDHA7Q9UN72 937 aa12.22□□□□□ -0.45
PABPC1-214ENST00000520142 INPP5FQ9Y2H2 1132 aa12.22□□□□□ -0.45
PABPC1-214ENST00000520142 PCDHGC5Q9Y5F6 944 aa12.22□□□□□ -0.45
PABPC1-214ENST00000520142 VCANP13611 3396 aa12.22□□□□□ -0.45
PABPC1-214ENST00000520142 MYO7AQ13402 2215 aa12.22□□□□□ -0.45
PABPC1-214ENST00000520142 CARNS1A5YM72 827 aa12.21□□□□□ -0.45
PABPC1-214ENST00000520142 MYMKA6NI61 221 aa12.21□□□□□ -0.45
PABPC1-214ENST00000520142 NT5C1B-RDH14C9J2C7 533 aa12.21□□□□□ -0.45
PABPC1-214ENST00000520142 PTGESO14684 152 aa12.21□□□□□ -0.45
PABPC1-214ENST00000520142 MEFVO15553 781 aaPredicted RBP12.21□□□□□ -0.45
PABPC1-214ENST00000520142 POMCP01189 267 aa12.21□□□□□ -0.45
PABPC1-214ENST00000520142 SCP2P22307 547 aa12.21□□□□□ -0.45
PABPC1-214ENST00000520142 MCM4P33991 863 aa12.21□□□□□ -0.45
PABPC1-214ENST00000520142 ALDH7A1P49419 539 aaKnown RBP12.21□□□□□ -0.45
PABPC1-214ENST00000520142 SCNN1GP51170 649 aa12.21□□□□□ -0.45
PABPC1-214ENST00000520142 SMTNP53814 917 aa12.21□□□□□ -0.45
PABPC1-214ENST00000520142 TFF2Q03403 129 aa12.21□□□□□ -0.45
PABPC1-214ENST00000520142 KCNC3Q14003 757 aa12.21□□□□□ -0.45
PABPC1-214ENST00000520142 DHX8Q14562 1220 aaKnown RBP12.21□□□□□ -0.45
PABPC1-214ENST00000520142 DCAF4L1Q3SXM0 396 aa12.21□□□□□ -0.45
PABPC1-214ENST00000520142 XKR4Q5GH76 650 aa12.21□□□□□ -0.45
PABPC1-214ENST00000520142 RRAGBQ5VZM2 374 aa12.21□□□□□ -0.45
PABPC1-214ENST00000520142 PDE12Q6L8Q7 609 aaKnown RBP12.21□□□□□ -0.45
PABPC1-214ENST00000520142 ZPBP2Q6X784 338 aa12.21□□□□□ -0.45
PABPC1-214ENST00000520142 CCDC73Q6ZRK6 1079 aa12.21□□□□□ -0.45
PABPC1-214ENST00000520142 HAUS6Q7Z4H7 955 aa12.21□□□□□ -0.45
PABPC1-214ENST00000520142 ADGRD2Q7Z7M1 963 aa12.21□□□□□ -0.45
PABPC1-214ENST00000520142 RNF168Q8IYW5 571 aaPredicted RBP12.21□□□□□ -0.45
PABPC1-214ENST00000520142 URGCPQ8TCY9 931 aa12.21□□□□□ -0.45
PABPC1-214ENST00000520142 HLA-CQ95604 372 aa12.21□□□□□ -0.45
PABPC1-214ENST00000520142 PABPC5Q96DU9 382 aaKnown RBP12.21□□□□□ -0.45
PABPC1-214ENST00000520142 IGSF21Q96ID5 467 aa12.21□□□□□ -0.45
PABPC1-214ENST00000520142 CHAMP1Q96JM3 812 aa12.21□□□□□ -0.45
PABPC1-214ENST00000520142 SPATA32Q96LK8 384 aa12.21□□□□□ -0.45
PABPC1-214ENST00000520142 ASB2Q96Q27 587 aa12.21□□□□□ -0.45
PABPC1-214ENST00000520142 STRA6Q9BX79 667 aa12.21□□□□□ -0.45
PABPC1-214ENST00000520142 MRPL4Q9BYD3 311 aaKnown RBP12.21□□□□□ -0.45
PABPC1-214ENST00000520142 TRIM6Q9C030 488 aaPredicted RBP12.21□□□□□ -0.45
PABPC1-214ENST00000520142 CDT1Q9H211 546 aa12.21□□□□□ -0.45
PABPC1-214ENST00000520142 ST6GALNAC4Q9H4F1 302 aa12.21□□□□□ -0.45
PABPC1-214ENST00000520142 PARVGQ9HBI0 331 aa12.21□□□□□ -0.45
PABPC1-214ENST00000520142 TLR9Q9NR96 1032 aa12.21□□□□□ -0.45
PABPC1-214ENST00000520142 KBTBD4Q9NVX7 518 aa12.21□□□□□ -0.45
PABPC1-214ENST00000520142 SNTG2Q9NY99 539 aa12.21□□□□□ -0.45
PABPC1-214ENST00000520142 BRWD1Q9NSI6 2320 aa12.2□□□□□ -0.46
PABPC1-214ENST00000520142 FRMD3A2A2Y4 597 aa12.2□□□□□ -0.46
PABPC1-214ENST00000520142 NRP1O14786 923 aa12.2□□□□□ -0.46
PABPC1-214ENST00000520142 TRAK2O60296 914 aa12.2□□□□□ -0.46
PABPC1-214ENST00000520142 ZC3H11AO75152 810 aaKnown RBP eCLIP12.2□□□□□ -0.46
PABPC1-214ENST00000520142 PPP1R37O75864 691 aa12.2□□□□□ -0.46
PABPC1-214ENST00000520142 PIGRP01833 764 aa12.2□□□□□ -0.46
PABPC1-214ENST00000520142 BMP1P13497 986 aa12.2□□□□□ -0.46
PABPC1-214ENST00000520142 LIG1P18858 919 aa12.2□□□□□ -0.46
PABPC1-214ENST00000520142 GTF2F1P35269 517 aaKnown RBP eCLIP12.2□□□□□ -0.46
PABPC1-214ENST00000520142 TXLNAP40222 546 aa12.2□□□□□ -0.46
PABPC1-214ENST00000520142 GRM5P41594 1212 aa12.2□□□□□ -0.46
PABPC1-214ENST00000520142 MRPS5P82675 430 aaKnown RBP12.2□□□□□ -0.46
PABPC1-214ENST00000520142 GTF2BQ00403 316 aa12.2□□□□□ -0.46
PABPC1-214ENST00000520142 ADAM15Q13444 863 aa12.2□□□□□ -0.46
PABPC1-214ENST00000520142 FOXD4L6Q3SYB3 417 aaPredicted RBP12.2□□□□□ -0.46
PABPC1-214ENST00000520142 ALKAL1Q6UXT8 129 aa12.2□□□□□ -0.46
PABPC1-214ENST00000520142 FOXD4L3Q6VB84 417 aaPredicted RBP12.2□□□□□ -0.46
PABPC1-214ENST00000520142 DDX53Q86TM3 631 aaKnown RBP12.2□□□□□ -0.46
PABPC1-214ENST00000520142 HACE1Q8IYU2 909 aa12.2□□□□□ -0.46
PABPC1-214ENST00000520142 CEP120Q8N960 986 aa12.2□□□□□ -0.46
PABPC1-214ENST00000520142 TMEM87AQ8NBN3 555 aa12.2□□□□□ -0.46
PABPC1-214ENST00000520142 RASSF8Q8NHQ8 419 aa12.2□□□□□ -0.46
PABPC1-214ENST00000520142 DDX12PQ92771 950 aa12.2□□□□□ -0.46
PABPC1-214ENST00000520142 APOL6Q9BWW8 343 aa12.2□□□□□ -0.46
PABPC1-214ENST00000520142 PANK2Q9BZ23 570 aa12.2□□□□□ -0.46
PABPC1-214ENST00000520142 HAPLN2Q9GZV7 340 aa12.2□□□□□ -0.46
PABPC1-214ENST00000520142 UBE2ZQ9H832 354 aaPredicted RBP12.2□□□□□ -0.46
PABPC1-214ENST00000520142 MARCH5Q9NX47 278 aa12.2□□□□□ -0.46
PABPC1-214ENST00000520142 IRAK3Q9Y616 596 aa12.2□□□□□ -0.46
PABPC1-214ENST00000520142 MYH11P35749 1972 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms