RNA–Protein interactions for RNA: ENST00000519596.5

PABPC1-211, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 3

Gene PABPC1, Length 771 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-211ENST00000519596 FOXRED1Q96CU9 486 aaPredicted RBP3.22□□□□□ -1.89
PABPC1-211ENST00000519596 PGBD4Q96DM1 585 aa3.22□□□□□ -1.89
PABPC1-211ENST00000519596 ZNF512Q96ME7 567 aaPredicted RBP3.22□□□□□ -1.89
PABPC1-211ENST00000519596 UIMC1Q96RL1 719 aa3.22□□□□□ -1.89
PABPC1-211ENST00000519596 MPHOSPH6Q99547 160 aaKnown RBP3.22□□□□□ -1.89
PABPC1-211ENST00000519596 HDAC5Q9UQL6 1122 aa3.22□□□□□ -1.89
PABPC1-211ENST00000519596 CBX4O00257 560 aa3.21□□□□□ -1.9
PABPC1-211ENST00000519596 NRP1O14786 923 aa3.21□□□□□ -1.9
PABPC1-211ENST00000519596 KPNA6O60684 536 aa3.21□□□□□ -1.9
PABPC1-211ENST00000519596 CDC45O75419 566 aa3.21□□□□□ -1.9
PABPC1-211ENST00000519596 FSBPO95073 299 aa3.21□□□□□ -1.9
PABPC1-211ENST00000519596 APOL3O95236 402 aa3.21□□□□□ -1.9
PABPC1-211ENST00000519596 ABHD16AO95870 558 aa3.21□□□□□ -1.9
PABPC1-211ENST00000519596 NUDT3O95989 172 aa3.21□□□□□ -1.9
PABPC1-211ENST00000519596 KRT18P05783 430 aaKnown RBP3.21□□□□□ -1.9
PABPC1-211ENST00000519596 SLC9A1P19634 815 aa3.21□□□□□ -1.9
PABPC1-211ENST00000519596 GNALP38405 381 aa3.21□□□□□ -1.9
PABPC1-211ENST00000519596 CASP2P42575 452 aa3.21□□□□□ -1.9
PABPC1-211ENST00000519596 NEK4P51957 841 aa3.21□□□□□ -1.9
PABPC1-211ENST00000519596 ANTXR2P58335 489 aa3.21□□□□□ -1.9
PABPC1-211ENST00000519596 SLC25A3Q00325 362 aa3.21□□□□□ -1.9
PABPC1-211ENST00000519596 AMPD3Q01432 767 aa3.21□□□□□ -1.9
PABPC1-211ENST00000519596 HLTFQ14527 1009 aaKnown RBP eCLIP3.21□□□□□ -1.92e-6■■■□□ 16.6
PABPC1-211ENST00000519596 PPP2R5AQ15172 486 aa3.21□□□□□ -1.9
PABPC1-211ENST00000519596 PLEKHG4Q58EX7 1191 aa3.21□□□□□ -1.9
PABPC1-211ENST00000519596 CREB3L3Q68CJ9 461 aa3.21□□□□□ -1.9
PABPC1-211ENST00000519596 CNNM4Q6P4Q7 775 aa3.21□□□□□ -1.9
PABPC1-211ENST00000519596 KCNV1Q6PIU1 500 aa3.21□□□□□ -1.9
PABPC1-211ENST00000519596 UBE2R2Q712K3 238 aaPredicted RBP3.21□□□□□ -1.9
PABPC1-211ENST00000519596 CLEC14AQ86T13 490 aa3.21□□□□□ -1.9
PABPC1-211ENST00000519596 LRRTM3Q86VH5 581 aa3.21□□□□□ -1.9
PABPC1-211ENST00000519596 C7orf31Q8N865 590 aa3.21□□□□□ -1.9
PABPC1-211ENST00000519596 CHST14Q8NCH0 376 aa3.21□□□□□ -1.9
PABPC1-211ENST00000519596 LSM14AQ8ND56 463 aaKnown RBP3.21□□□□□ -1.9
PABPC1-211ENST00000519596 PROKR1Q8TCW9 393 aa3.21□□□□□ -1.9
PABPC1-211ENST00000519596 ST8SIA2Q92186 375 aa3.21□□□□□ -1.9
PABPC1-211ENST00000519596 NINJ1Q92982 152 aa3.21□□□□□ -1.9
PABPC1-211ENST00000519596 NKD2Q969F2 451 aaPredicted RBP3.21□□□□□ -1.9
PABPC1-211ENST00000519596 LENG9Q96B70 501 aa3.21□□□□□ -1.9
PABPC1-211ENST00000519596 NEUROD6Q96NK8 337 aa3.21□□□□□ -1.9
PABPC1-211ENST00000519596 RIOX1Q9H6W3 641 aa3.21□□□□□ -1.9
PABPC1-211ENST00000519596 CWC25Q9NXE8 425 aaPredicted RBP3.21□□□□□ -1.9
PABPC1-211ENST00000519596 GPRC5BQ9NZH0 403 aa3.21□□□□□ -1.9
PABPC1-211ENST00000519596 H2AFY2Q9P0M6 372 aaPredicted RBP3.21□□□□□ -1.9
PABPC1-211ENST00000519596 B4GALT6Q9UBX8 382 aa3.21□□□□□ -1.9
PABPC1-211ENST00000519596 ZNHIT2Q9UHR6 403 aa3.21□□□□□ -1.9
PABPC1-211ENST00000519596 DNAI1Q9UI46 699 aa3.21□□□□□ -1.9
PABPC1-211ENST00000519596 ZNF891A8MT65 544 aaPredicted RBP3.2□□□□□ -1.9
PABPC1-211ENST00000519596 KRTAP29-1A8MX34 341 aaPredicted RBP3.2□□□□□ -1.9
PABPC1-211ENST00000519596 TBX3O15119 743 aa3.2□□□□□ -1.9
PABPC1-211ENST00000519596 ITGB1P05556 798 aa3.2□□□□□ -1.9
PABPC1-211ENST00000519596 MYL1P05976 194 aa3.2□□□□□ -1.9
PABPC1-211ENST00000519596 CT47B1P0C2W7 299 aaPredicted RBP3.2□□□□□ -1.9
PABPC1-211ENST00000519596 GYPEP15421 78 aa3.2□□□□□ -1.9
PABPC1-211ENST00000519596 ATP2A2P16615 1042 aaKnown RBP3.2□□□□□ -1.9
PABPC1-211ENST00000519596 PEX19P40855 299 aa3.2□□□□□ -1.9
PABPC1-211ENST00000519596 KIR2DL3P43628 341 aa3.2□□□□□ -1.9
PABPC1-211ENST00000519596 TRAPPC10P48553 1259 aa3.2□□□□□ -1.9
PABPC1-211ENST00000519596 ADCY2Q08462 1091 aa3.2□□□□□ -1.9
PABPC1-211ENST00000519596 SPIDRQ14159 915 aa3.2□□□□□ -1.9
PABPC1-211ENST00000519596 EPHA7Q15375 998 aa3.2□□□□□ -1.9
PABPC1-211ENST00000519596 CDC37Q16543 378 aaPredicted RBP3.2□□□□□ -1.9
PABPC1-211ENST00000519596 TIGD2Q4W5G0 525 aa3.2□□□□□ -1.9
PABPC1-211ENST00000519596 DCAF17Q5H9S7 520 aaPredicted RBP3.2□□□□□ -1.9
PABPC1-211ENST00000519596 PPP4R4Q6NUP7 873 aa3.2□□□□□ -1.9
PABPC1-211ENST00000519596 KIAA0907Q7Z7F0 614 aaPredicted RBP3.2□□□□□ -1.9
PABPC1-211ENST00000519596 MRGPREQ86SM8 312 aa3.2□□□□□ -1.9
PABPC1-211ENST00000519596 RPAINQ86UA6 219 aa3.2□□□□□ -1.9
PABPC1-211ENST00000519596 ZSCAN30Q86W11 494 aa3.2□□□□□ -1.9
PABPC1-211ENST00000519596 PHYKPLQ8IUZ5 450 aa3.2□□□□□ -1.9
PABPC1-211ENST00000519596 WDR75Q8IWA0 830 aaKnown RBP3.2□□□□□ -1.9
PABPC1-211ENST00000519596 SUGP2Q8IX01 1082 aaKnown RBP eCLIP3.2□□□□□ -1.9
PABPC1-211ENST00000519596 NIM1KQ8IY84 436 aa3.2□□□□□ -1.9
PABPC1-211ENST00000519596 CHPFQ8IZ52 775 aa3.2□□□□□ -1.9
PABPC1-211ENST00000519596 SYNPOQ8N3V7 929 aa3.2□□□□□ -1.9
PABPC1-211ENST00000519596 KIAA1958Q8N8K9 716 aa3.2□□□□□ -1.9
PABPC1-211ENST00000519596 CCDC89Q8N998 374 aa3.2□□□□□ -1.9
PABPC1-211ENST00000519596 TEX19Q8NA77 164 aa3.2□□□□□ -1.9
PABPC1-211ENST00000519596 MDGA1Q8NFP4 955 aa3.2□□□□□ -1.9
PABPC1-211ENST00000519596 CPT1CQ8TCG5 803 aa3.2□□□□□ -1.9
PABPC1-211ENST00000519596 HIST1H2AHQ96KK5 128 aa3.2□□□□□ -1.9
PABPC1-211ENST00000519596 TTC14Q96N46 770 aa3.2□□□□□ -1.9
PABPC1-211ENST00000519596 MYCBPQ99417 103 aaPredicted RBP3.2□□□□□ -1.9
PABPC1-211ENST00000519596 ELF4Q99607 663 aaPredicted RBP3.2□□□□□ -1.9
PABPC1-211ENST00000519596 HIST1H2AJQ99878 128 aa3.2□□□□□ -1.9
PABPC1-211ENST00000519596 TARS2Q9BW92 718 aaKnown RBP3.2□□□□□ -1.9
PABPC1-211ENST00000519596 CYP4F11Q9HBI6 524 aa3.2□□□□□ -1.9
PABPC1-211ENST00000519596 INTS7Q9NVH2 962 aaKnown RBP3.2□□□□□ -1.9
PABPC1-211ENST00000519596 OXSMQ9NWU1 459 aa3.2□□□□□ -1.9
PABPC1-211ENST00000519596 ZNF69Q9UC07 566 aa3.2□□□□□ -1.9
PABPC1-211ENST00000519596 EIF2B4Q9UI10 523 aaKnown RBP3.2□□□□□ -1.9
PABPC1-211ENST00000519596 PACSIN3Q9UKS6 424 aa3.2□□□□□ -1.9
PABPC1-211ENST00000519596 FZD1Q9UP38 647 aa3.2□□□□□ -1.9
PABPC1-211ENST00000519596 SORCS3Q9UPU3 1222 aa3.2□□□□□ -1.9
PABPC1-211ENST00000519596 LZTS1Q9Y250 596 aa3.2□□□□□ -1.9
PABPC1-211ENST00000519596 KLRG2A4D1S0 409 aaPredicted RBP3.19□□□□□ -1.9
PABPC1-211ENST00000519596 B3GALT2O43825 422 aa3.19□□□□□ -1.9
PABPC1-211ENST00000519596 HMMRO75330 724 aa3.19□□□□□ -1.9
PABPC1-211ENST00000519596 SCAF4O95104 1147 aaKnown RBP3.19□□□□□ -1.9
PABPC1-211ENST00000519596 F2P00734 622 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms