RNA–Protein interactions for RNA: ENST00000519485.1

CSMD3-209, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 3

Gene CSMD3, Length 452 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-209ENST00000519485 C16orf86Q6ZW13 317 aa4.37□□□□□ -1.71
CSMD3-209ENST00000519485 LILRA3Q8N6C8 439 aaPredicted RBP4.37□□□□□ -1.71
CSMD3-209ENST00000519485 FAM193BQ96PV7 902 aaPredicted RBP4.37□□□□□ -1.71
CSMD3-209ENST00000519485 MAP7D2Q96T17 732 aa4.37□□□□□ -1.71
CSMD3-209ENST00000519485 CHST2Q9Y4C5 530 aa4.37□□□□□ -1.71
CSMD3-209ENST00000519485 MRPL42Q9Y6G3 142 aaKnown RBP4.37□□□□□ -1.71
CSMD3-209ENST00000519485 CASKIN1Q8WXD9 1431 aa4.37□□□□□ -1.71
CSMD3-209ENST00000519485 ZMYM4Q5VZL5 1548 aa4.36□□□□□ -1.71
CSMD3-209ENST00000519485 DIRC3C9JPN6 131 aa4.36□□□□□ -1.71
CSMD3-209ENST00000519485 KPNA6O60684 536 aa4.36□□□□□ -1.71
CSMD3-209ENST00000519485 GAS7O60861 476 aa4.36□□□□□ -1.71
CSMD3-209ENST00000519485 RFPL3O75679 317 aa4.36□□□□□ -1.71
CSMD3-209ENST00000519485 SEC24CP53992 1094 aa4.36□□□□□ -1.71
CSMD3-209ENST00000519485 ELLP55199 621 aaPredicted RBP4.36□□□□□ -1.71
CSMD3-209ENST00000519485 BEAN1Q3B7T3 259 aa4.36□□□□□ -1.71
CSMD3-209ENST00000519485 PRAMEF9Q5VWM5 478 aa4.36□□□□□ -1.71
CSMD3-209ENST00000519485 FBXO42Q6P3S6 717 aa4.36□□□□□ -1.71
CSMD3-209ENST00000519485 CENPQQ7L2Z9 268 aaPredicted RBP4.36□□□□□ -1.71
CSMD3-209ENST00000519485 MTERF4Q7Z6M4 381 aaKnown RBP4.36□□□□□ -1.71
CSMD3-209ENST00000519485 UNC5BQ8IZJ1 945 aa4.36□□□□□ -1.71
CSMD3-209ENST00000519485 CPPED1Q9BRF8 314 aaPredicted RBP4.36□□□□□ -1.71
CSMD3-209ENST00000519485 CPEB1Q9BZB8 566 aaKnown RBP4.36□□□□□ -1.71
CSMD3-209ENST00000519485 WDR11Q9BZH6 1224 aa4.36□□□□□ -1.71
CSMD3-209ENST00000519485 PNNQ9H307 717 aaKnown RBP4.36□□□□□ -1.71
CSMD3-209ENST00000519485 UPF2Q9HAU5 1272 aaKnown RBP4.36□□□□□ -1.71
CSMD3-209ENST00000519485 ALG13Q9NP73 1137 aaKnown RBP4.36□□□□□ -1.71
CSMD3-209ENST00000519485 IFT57Q9NWB7 429 aa4.36□□□□□ -1.71
CSMD3-209ENST00000519485 NCDNQ9UBB6 729 aa4.36□□□□□ -1.71
CSMD3-209ENST00000519485 EIF2B4Q9UI10 523 aaKnown RBP4.36□□□□□ -1.71
CSMD3-209ENST00000519485 CLCA2Q9UQC9 943 aa4.36□□□□□ -1.71
CSMD3-209ENST00000519485 BRD4O60885 1362 aaPredicted RBP4.36□□□□□ -1.71
CSMD3-209ENST00000519485 CCDC144AA2RUR9 1427 aa4.36□□□□□ -1.71
CSMD3-209ENST00000519485 FGD6Q6ZV73 1430 aa4.36□□□□□ -1.71
CSMD3-209ENST00000519485 PLEKHH2Q8IVE3 1493 aa4.36□□□□□ -1.71
CSMD3-209ENST00000519485 ATAD2BQ9ULI0 1458 aa4.36□□□□□ -1.71
CSMD3-209ENST00000519485 THOC2Q8NI27 1593 aaKnown RBP4.36□□□□□ -1.71
CSMD3-209ENST00000519485 PTPN23Q9H3S7 1636 aa4.35□□□□□ -1.71
CSMD3-209ENST00000519485 COL11A2P13942 1736 aaPredicted RBP4.35□□□□□ -1.71
CSMD3-209ENST00000519485 LPXNO60711 386 aa4.35□□□□□ -1.71
CSMD3-209ENST00000519485 OPHN1O60890 802 aa4.35□□□□□ -1.71
CSMD3-209ENST00000519485 DNAJC6O75061 913 aa4.35□□□□□ -1.71
CSMD3-209ENST00000519485 TPM2P07951 284 aa4.35□□□□□ -1.71
CSMD3-209ENST00000519485 RRP1P56182 461 aaKnown RBP4.35□□□□□ -1.71
CSMD3-209ENST00000519485 FAM189BP81408 668 aa4.35□□□□□ -1.71
CSMD3-209ENST00000519485 ADCY1Q08828 1119 aa4.35□□□□□ -1.71
CSMD3-209ENST00000519485 SART3Q15020 963 aaKnown RBP4.35□□□□□ -1.71
CSMD3-209ENST00000519485 ERCC6LQ2NKX8 1250 aa4.35□□□□□ -1.71
CSMD3-209ENST00000519485 BHLHA9Q7RTU4 235 aa4.35□□□□□ -1.71
CSMD3-209ENST00000519485 GDF7Q7Z4P5 450 aa4.35□□□□□ -1.71
CSMD3-209ENST00000519485 NIM1KQ8IY84 436 aa4.35□□□□□ -1.71
CSMD3-209ENST00000519485 NGEFQ8N5V2 710 aa4.35□□□□□ -1.71
CSMD3-209ENST00000519485 KIAA1958Q8N8K9 716 aa4.35□□□□□ -1.71
CSMD3-209ENST00000519485 SLC9A6Q92581 669 aa4.35□□□□□ -1.71
CSMD3-209ENST00000519485 ANKS1AQ92625 1134 aa4.35□□□□□ -1.71
CSMD3-209ENST00000519485 ANP32BQ92688 251 aaKnown RBP4.35□□□□□ -1.71
CSMD3-209ENST00000519485 TUBGCP5Q96RT8 1024 aa4.35□□□□□ -1.71
CSMD3-209ENST00000519485 SOX7Q9BT81 388 aa4.35□□□□□ -1.71
CSMD3-209ENST00000519485 AKIP1Q9NQ31 210 aa4.35□□□□□ -1.71
CSMD3-209ENST00000519485 INTS7Q9NVH2 962 aaKnown RBP4.35□□□□□ -1.71
CSMD3-209ENST00000519485 MTUS2Q5JR59 1369 aa4.35□□□□□ -1.71
CSMD3-209ENST00000519485 KIF15Q9NS87 1388 aa4.35□□□□□ -1.71
CSMD3-209ENST00000519485 HECW1Q76N89 1606 aa4.35□□□□□ -1.71
CSMD3-209ENST00000519485 PIPSLA2A3N6 862 aa4.34□□□□□ -1.71
CSMD3-209ENST00000519485 PROB1E7EW31 1015 aa4.34□□□□□ -1.71
CSMD3-209ENST00000519485 CBX4O00257 560 aa4.34□□□□□ -1.71
CSMD3-209ENST00000519485 HKR1P10072 659 aa4.34□□□□□ -1.71
CSMD3-209ENST00000519485 GAAP10253 952 aa4.34□□□□□ -1.71
CSMD3-209ENST00000519485 SLC9A1P19634 815 aa4.34□□□□□ -1.71
CSMD3-209ENST00000519485 MRPL49Q13405 166 aaKnown RBP4.34□□□□□ -1.71
CSMD3-209ENST00000519485 FAM214AQ32MH5 1076 aa4.34□□□□□ -1.71
CSMD3-209ENST00000519485 TKFCQ3LXA3 575 aa4.34□□□□□ -1.71
CSMD3-209ENST00000519485 ABHD17BQ5VST6 288 aa4.34□□□□□ -1.71
CSMD3-209ENST00000519485 DRICH1Q6PGQ1 229 aaPredicted RBP4.34□□□□□ -1.71
CSMD3-209ENST00000519485 MICALCLQ6ZW33 695 aa4.34□□□□□ -1.71
CSMD3-209ENST00000519485 GPRIN1Q7Z2K8 1008 aa4.34□□□□□ -1.71
CSMD3-209ENST00000519485 LRRTM3Q86VH5 581 aa4.34□□□□□ -1.71
CSMD3-209ENST00000519485 JAZF1Q86VZ6 243 aa4.34□□□□□ -1.71
CSMD3-209ENST00000519485 PLXDC1Q8IUK5 500 aa4.34□□□□□ -1.71
CSMD3-209ENST00000519485 DHX37Q8IY37 1157 aaKnown RBP4.34□□□□□ -1.71
CSMD3-209ENST00000519485 LCORLQ8N3X6 602 aa4.34□□□□□ -1.71
CSMD3-209ENST00000519485 SIMC1Q8NDZ2 872 aa4.34□□□□□ -1.71
CSMD3-209ENST00000519485 NINJ1Q92982 152 aa4.34□□□□□ -1.71
CSMD3-209ENST00000519485 UIMC1Q96RL1 719 aa4.34□□□□□ -1.71
CSMD3-209ENST00000519485 LSM14BQ9BX40 385 aaKnown RBP4.34□□□□□ -1.71
CSMD3-209ENST00000519485 MTG2Q9H4K7 406 aa4.34□□□□□ -1.71
CSMD3-209ENST00000519485 TOMM22Q9NS69 142 aa4.34□□□□□ -1.71
CSMD3-209ENST00000519485 B4GALT6Q9UBX8 382 aa4.34□□□□□ -1.71
CSMD3-209ENST00000519485 LAS1LQ9Y4W2 734 aaKnown RBP4.34□□□□□ -1.71
CSMD3-209ENST00000519485 SPATA31A6Q5VVP1 1343 aa4.34□□□□□ -1.71
CSMD3-209ENST00000519485 EIF3AQ14152 1382 aaKnown RBP4.34□□□□□ -1.71
CSMD3-209ENST00000519485 CARMIL1Q5VZK9 1371 aa4.34□□□□□ -1.71
CSMD3-209ENST00000519485 FGD5Q6ZNL6 1462 aa4.34□□□□□ -1.71
CSMD3-209ENST00000519485 SUPT6HQ7KZ85 1726 aaKnown RBP4.33□□□□□ -1.72
CSMD3-209ENST00000519485 MYOM3Q5VTT5 1437 aa4.33□□□□□ -1.72
CSMD3-209ENST00000519485 MYBBP1AQ9BQG0 1328 aaKnown RBP4.33□□□□□ -1.72
CSMD3-209ENST00000519485 CENPJQ9HC77 1338 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-209ENST00000519485 APOL3O95236 402 aa4.33□□□□□ -1.72
CSMD3-209ENST00000519485 C1RP00736 705 aa4.33□□□□□ -1.72
CSMD3-209ENST00000519485 PTX3P26022 381 aaPredicted RBP4.33□□□□□ -1.72
CSMD3-209ENST00000519485 APOBEC3AP31941 199 aaPredicted RBP4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms