RNA–Protein interactions for RNA: ENST00000517660.1

PDGFRB-203, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 611 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-203ENST00000517660 ALDH2P05091 517 aa11.71□□□□□ -0.53
PDGFRB-203ENST00000517660 SRGAP2BP0DMP2 458 aa11.71□□□□□ -0.53
PDGFRB-203ENST00000517660 CYP11B2P19099 503 aa11.71□□□□□ -0.53
PDGFRB-203ENST00000517660 AOC1P19801 751 aa11.71□□□□□ -0.53
PDGFRB-203ENST00000517660 TOB1P50616 345 aaPredicted RBP11.71□□□□□ -0.53
PDGFRB-203ENST00000517660 MBTD1Q05BQ5 628 aa11.71□□□□□ -0.53
PDGFRB-203ENST00000517660 PTGDRQ13258 359 aa11.71□□□□□ -0.53
PDGFRB-203ENST00000517660 NBR1Q14596 966 aa11.71□□□□□ -0.53
PDGFRB-203ENST00000517660 SMC1AQ14683 1233 aaKnown RBP11.71□□□□□ -0.53
PDGFRB-203ENST00000517660 AMHR2Q16671 573 aa11.71□□□□□ -0.53
PDGFRB-203ENST00000517660 POTEGQ6S5H5 508 aa11.71□□□□□ -0.53
PDGFRB-203ENST00000517660 PADI6Q6TGC4 694 aa11.71□□□□□ -0.53
PDGFRB-203ENST00000517660 TMEM184AQ6ZMB5 413 aa11.71□□□□□ -0.53
PDGFRB-203ENST00000517660 MAEAQ7L5Y9 396 aa11.71□□□□□ -0.53
PDGFRB-203ENST00000517660 DDX53Q86TM3 631 aaKnown RBP11.71□□□□□ -0.53
PDGFRB-203ENST00000517660 ZNF280BQ86YH2 543 aa11.71□□□□□ -0.53
PDGFRB-203ENST00000517660 DTWD2Q8NBA8 298 aa11.71□□□□□ -0.53
PDGFRB-203ENST00000517660 SMG8Q8ND04 991 aaKnown RBP11.71□□□□□ -0.53
PDGFRB-203ENST00000517660 IGSF21Q96ID5 467 aa11.71□□□□□ -0.53
PDGFRB-203ENST00000517660 CPB2Q96IY4 423 aa11.71□□□□□ -0.53
PDGFRB-203ENST00000517660 FAM193BQ96PV7 902 aaPredicted RBP11.71□□□□□ -0.53
PDGFRB-203ENST00000517660 RAB34Q9BZG1 259 aa11.71□□□□□ -0.53
PDGFRB-203ENST00000517660 CSRNP2Q9H175 543 aa11.71□□□□□ -0.53
PDGFRB-203ENST00000517660 GPRC5CQ9NQ84 441 aa11.71□□□□□ -0.53
PDGFRB-203ENST00000517660 LRWD1Q9UFC0 647 aa11.71□□□□□ -0.53
PDGFRB-203ENST00000517660 PCDHB6Q9Y5E3 794 aa11.71□□□□□ -0.53
PDGFRB-203ENST00000517660 PLXNA4Q9HCM2 1894 aa11.71□□□□□ -0.53
PDGFRB-203ENST00000517660 ATRXP46100 2492 aa11.7□□□□□ -0.54
PDGFRB-203ENST00000517660 OTOGLQ3ZCN5 2332 aa11.7□□□□□ -0.54
PDGFRB-203ENST00000517660 C2orf71A6NGG8 1288 aa11.7□□□□□ -0.54
PDGFRB-203ENST00000517660 LAD1O00515 517 aa11.7□□□□□ -0.54
PDGFRB-203ENST00000517660 ARF4P18085 180 aaPredicted RBP11.7□□□□□ -0.54
PDGFRB-203ENST00000517660 CCT6AP40227 531 aaKnown RBP11.7□□□□□ -0.54
PDGFRB-203ENST00000517660 SLC11A1P49279 550 aa11.7□□□□□ -0.54
PDGFRB-203ENST00000517660 MCTP1Q6DN14 999 aa11.7□□□□□ -0.54
PDGFRB-203ENST00000517660 ANKRD54Q6NXT1 300 aa11.7□□□□□ -0.54
PDGFRB-203ENST00000517660 PPP4R3CPQ6ZMV5 832 aa11.7□□□□□ -0.54
PDGFRB-203ENST00000517660 HACE1Q8IYU2 909 aa11.7□□□□□ -0.54
PDGFRB-203ENST00000517660 VPS52Q8N1B4 723 aa11.7□□□□□ -0.54
PDGFRB-203ENST00000517660 KCNG4Q8TDN1 519 aa11.7□□□□□ -0.54
PDGFRB-203ENST00000517660 TBC1D32Q96NH3 1257 aa11.7□□□□□ -0.54
PDGFRB-203ENST00000517660 TMEM175Q9BSA9 504 aa11.7□□□□□ -0.54
PDGFRB-203ENST00000517660 EIF2AQ9BY44 585 aaKnown RBP11.7□□□□□ -0.54
PDGFRB-203ENST00000517660 GBP3Q9H0R5 595 aa11.7□□□□□ -0.54
PDGFRB-203ENST00000517660 POMKQ9H5K3 350 aa11.7□□□□□ -0.54
PDGFRB-203ENST00000517660 PRMT7Q9NVM4 692 aaPredicted RBP11.7□□□□□ -0.54
PDGFRB-203ENST00000517660 STK39Q9UEW8 545 aa11.7□□□□□ -0.54
PDGFRB-203ENST00000517660 FAN1Q9Y2M0 1017 aa11.7□□□□□ -0.54
PDGFRB-203ENST00000517660 IPPQ9Y573 584 aa11.7□□□□□ -0.54
PDGFRB-203ENST00000517660 WDR81Q562E7 1941 aa11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 A0A1B0GUA9 196 aa11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 LRRIQ4A6NIV6 560 aa11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 H3BQV1 296 aa11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 INPPL1O15357 1258 aa11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 B4GALT5O43286 388 aa11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 CLASP2O75122 1294 aaKnown RBP11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 DDHD2O94830 711 aa11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 CD2BP2O95400 341 aaKnown RBP11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 POMCP01189 267 aa11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 CTSAP10619 480 aa11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 GJB2P29033 226 aa11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 PRPHP41219 470 aa11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 AFF1P51825 1210 aaKnown RBP11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 ATXN1P54253 815 aaKnown RBP11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 GIT2Q14161 759 aa11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 ECM1Q16610 540 aa11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 FAM187BQ17R55 369 aa11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 RILPL1Q5EBL4 403 aa11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 SLC27A1Q6PCB7 646 aa11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 DTHD1Q6ZMT9 781 aa11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 TMEM173Q86WV6 379 aaPredicted RBP11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 ZBTB8OSQ8IWT0 167 aa11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 IGSF22Q8N9C0 903 aa11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 TMEM87AQ8NBN3 555 aa11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 FLCNQ8NFG4 579 aa11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 FEZF2Q8TBJ5 459 aa11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 CASP10Q92851 521 aa11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 PRIMPOLQ96LW4 560 aa11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 TRIM6Q9C030 488 aaPredicted RBP11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 C2orf40Q9H1Z8 148 aa11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 RNF39Q9H2S5 420 aa11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 SEMA4AQ9H3S1 761 aa11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 FZD8Q9H461 694 aa11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 TSHZ2Q9NRE2 1034 aa11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 DNAJB4Q9UDY4 337 aa11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 KIAA1024Q9UPX6 916 aa11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 GIT1Q9Y2X7 761 aa11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 IRAK3Q9Y616 596 aa11.69□□□□□ -0.54
PDGFRB-203ENST00000517660 FNDC1Q4ZHG4 1894 aaPredicted RBP11.68□□□□□ -0.54
PDGFRB-203ENST00000517660 ARL5CA6NH57 179 aa11.68□□□□□ -0.54
PDGFRB-203ENST00000517660 B4GALT3O60512 393 aa11.68□□□□□ -0.54
PDGFRB-203ENST00000517660 HOXB8P17481 243 aaPredicted RBP11.68□□□□□ -0.54
PDGFRB-203ENST00000517660 CA8P35219 290 aa11.68□□□□□ -0.54
PDGFRB-203ENST00000517660 NAMPTP43490 491 aa11.68□□□□□ -0.54
PDGFRB-203ENST00000517660 PPP2R5AQ15172 486 aa11.68□□□□□ -0.54
PDGFRB-203ENST00000517660 KRT79Q5XKE5 535 aa11.68□□□□□ -0.54
PDGFRB-203ENST00000517660 CDCA2Q69YH5 1023 aaPredicted RBP11.68□□□□□ -0.54
PDGFRB-203ENST00000517660 LLGL2Q6P1M3 1020 aa11.68□□□□□ -0.54
PDGFRB-203ENST00000517660 DEPTORQ8TB45 409 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms