RNA–Protein interactions for RNA: ENST00000517183.1

SCARNA11.2-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 154 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.2-201ENST00000517183 HOXA4Q00056 320 aaPredicted RBP0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 EXOSC10Q01780 885 aaKnown RBP0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 RHDQ02161 417 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 ROM1Q03395 351 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 TFF2Q03403 129 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 DDR1Q08345 913 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 SF1Q15637 639 aaKnown RBP0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 CRY1Q16526 586 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 PPP2R5EQ16537 467 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 FAM153CQ494X1 144 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 SV2CQ496J9 727 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 FAM47CQ5HY64 1035 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 UBAP2Q5T6F2 1119 aaKnown RBP0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 FAM102AQ5T9C2 384 aaPredicted RBP0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 AGAP9Q5VTM2 703 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 STYK1Q6J9G0 422 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 SLC18B1Q6NT16 456 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 EFCAB12Q6NXP0 572 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 PDXDC1Q6P996 788 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 LVRNQ6Q4G3 990 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 BTNL9Q6UXG8 535 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 C9orf47Q6ZRZ4 202 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 KRTAP5-5Q701N2 237 aaPredicted RBP0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 USP53Q70EK8 1073 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 C16orf59Q7L2K0 433 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 IRF2BP2Q7Z5L9 587 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 YTHDF3Q7Z739 585 aaKnown RBP0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 TMPRSS12Q86WS5 348 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 MAPKAPK5Q8IW41 473 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 RHOT2Q8IXI1 618 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 COLGALT2Q8IYK4 626 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 UNC5BQ8IZJ1 945 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 TMEM132CQ8N3T6 1108 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 MSL3Q8N5Y2 521 aaKnown RBP0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 HIPK4Q8NE63 616 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 REPS2Q8NFH8 660 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 OR5AN1Q8NGI8 311 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 OR5M3Q8NGP4 307 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 ZFP28Q8NHY6 868 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 RPGRQ92834 1020 aaKnown RBP0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 DDX17Q92841 729 aaKnown RBP0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 FBXW5Q969U6 566 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 PTCD3Q96EY7 689 aaKnown RBP0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 IL17RAQ96F46 866 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 DYDC2Q96IM9 177 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 VCPIP1Q96JH7 1222 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 MAML3Q96JK9 1138 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 FAM84BQ96KN1 310 aaPredicted RBP0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 FAM161BQ96MY7 647 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 GBP4Q96PP9 640 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 UIMC1Q96RL1 719 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 MEIS3Q99687 375 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 AARSD1Q9BTE6 412 aaKnown RBP0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 CPEB1Q9BZB8 566 aaKnown RBP0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 PRSS22Q9GZN4 317 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 REXO4Q9GZR2 422 aaKnown RBP0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 SPRTNQ9H040 489 aaPredicted RBP0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 HIPK2Q9H2X6 1198 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 SLCO5A1Q9H2Y9 848 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 IPPKQ9H8X2 491 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 NCOA5Q9HCD5 579 aaKnown RBP0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 GALNT9Q9HCQ5 603 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 IL17RBQ9NRM6 502 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 KCNH7Q9NS40 1196 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 GJB4Q9NTQ9 266 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 POLR3BQ9NW08 1133 aaPredicted RBP0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 KCTD5Q9NXV2 234 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 SELENONQ9NZV5 590 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 MCM8Q9UJA3 840 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 PPT2Q9UMR5 302 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 PCDHAC2Q9Y5I4 1007 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 SCN5AQ14524 2016 aa0.33□□□□□ -2.36
SCARNA11.2-201ENST00000517183 A0A0A6YYJ9 748 aa0.32□□□□□ -2.36
SCARNA11.2-201ENST00000517183 A0A1B0GTW7 788 aa0.32□□□□□ -2.36
SCARNA11.2-201ENST00000517183 ARID3CA6NKF2 412 aa0.32□□□□□ -2.36
SCARNA11.2-201ENST00000517183 DRGXA6NNA5 263 aa0.32□□□□□ -2.36
SCARNA11.2-201ENST00000517183 C4orf47A7E2U8 309 aa0.32□□□□□ -2.36
SCARNA11.2-201ENST00000517183 ERI2A8K979 691 aaKnown RBP0.32□□□□□ -2.36
SCARNA11.2-201ENST00000517183 PATL2C9JE40 543 aaKnown RBP0.32□□□□□ -2.36
SCARNA11.2-201ENST00000517183 ZNF561-AS1K7EIQ3 104 aa0.32□□□□□ -2.36
SCARNA11.2-201ENST00000517183 GTPBP1O00178 669 aaKnown RBP0.32□□□□□ -2.36
SCARNA11.2-201ENST00000517183 ADAM10O14672 748 aa0.32□□□□□ -2.36
SCARNA11.2-201ENST00000517183 ACOT8O14734 319 aa0.32□□□□□ -2.36
SCARNA11.2-201ENST00000517183 SCAMP3O14828 347 aaKnown RBP0.32□□□□□ -2.36
SCARNA11.2-201ENST00000517183 TNFRSF13BO14836 293 aaPredicted RBP0.32□□□□□ -2.36
SCARNA11.2-201ENST00000517183 YY2O15391 372 aa0.32□□□□□ -2.36
SCARNA11.2-201ENST00000517183 LINC01565O15544 149 aa0.32□□□□□ -2.36
SCARNA11.2-201ENST00000517183 PJA2O43164 708 aa0.32□□□□□ -2.36
SCARNA11.2-201ENST00000517183 TBX1O43435 398 aa0.32□□□□□ -2.36
SCARNA11.2-201ENST00000517183 PROM1O43490 865 aa0.32□□□□□ -2.36
SCARNA11.2-201ENST00000517183 BRINP1O60477 761 aa0.32□□□□□ -2.36
SCARNA11.2-201ENST00000517183 HIP1RO75146 1068 aa0.32□□□□□ -2.36
SCARNA11.2-201ENST00000517183 JTBO76095 146 aa0.32□□□□□ -2.36
SCARNA11.2-201ENST00000517183 ALDH1A2O94788 518 aa0.32□□□□□ -2.36
SCARNA11.2-201ENST00000517183 PRLP01236 227 aa0.32□□□□□ -2.36
SCARNA11.2-201ENST00000517183 AMY2AP04746 511 aa0.32□□□□□ -2.36
SCARNA11.2-201ENST00000517183 APPP05067 770 aa0.32□□□□□ -2.36
SCARNA11.2-201ENST00000517183 ELANEP08246 267 aa0.32□□□□□ -2.36
SCARNA11.2-201ENST00000517183 MMEP08473 750 aa0.32□□□□□ -2.36
SCARNA11.2-201ENST00000517183 CLEC2LP0C7M8 214 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms