RNA–Protein interactions for RNA: ENST00000515834.1

TRIM41-209, Transcript of tripartite motif containing 41, humanhuman

TSL 1 (best)

Gene TRIM41, Length 7,015 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM41-209ENST00000515834 COG2Q14746 738 aa11.67□□□□□ -0.54
TRIM41-209ENST00000515834 WDR75Q8IWA0 830 aaKnown RBP11.67□□□□□ -0.54
TRIM41-209ENST00000515834 LINC00301Q8NCQ3 95 aa11.67□□□□□ -0.54
TRIM41-209ENST00000515834 STRBPQ96SI9 672 aaKnown RBP11.67□□□□□ -0.54
TRIM41-209ENST00000515834 BCL2L12Q9HB09 334 aa11.67□□□□□ -0.54
TRIM41-209ENST00000515834 NIPSNAP3AQ9UFN0 247 aaPredicted RBP11.67□□□□□ -0.54
TRIM41-209ENST00000515834 IP6K2Q9UHH9 426 aa11.67□□□□□ -0.54
TRIM41-209ENST00000515834 ZNF263O14978 683 aa11.67□□□□□ -0.54
TRIM41-209ENST00000515834 GPS1Q13098 491 aa11.67□□□□□ -0.54
TRIM41-209ENST00000515834 KRT72Q14CN4 511 aa11.67□□□□□ -0.54
TRIM41-209ENST00000515834 GNASQ5JWF2 1037 aa11.67□□□□□ -0.54
TRIM41-209ENST00000515834 KCNV1Q6PIU1 500 aa11.67□□□□□ -0.54
TRIM41-209ENST00000515834 GPT2Q8TD30 523 aa11.67□□□□□ -0.54
TRIM41-209ENST00000515834 SNX24Q9Y343 169 aa11.67□□□□□ -0.54
TRIM41-209ENST00000515834 KRT38O76015 456 aa11.67□□□□□ -0.54
TRIM41-209ENST00000515834 ATN1P54259 1190 aaPredicted RBP11.67□□□□□ -0.54
TRIM41-209ENST00000515834 ZNF211Q13398 564 aaPredicted RBP11.67□□□□□ -0.54
TRIM41-209ENST00000515834 SNX17Q15036 470 aa11.67□□□□□ -0.54
TRIM41-209ENST00000515834 E2F5Q15329 346 aa11.67□□□□□ -0.54
TRIM41-209ENST00000515834 NBPF20Q3BBV1 942 aa11.67□□□□□ -0.54
TRIM41-209ENST00000515834 NBPF10Q6P3W6 841 aaKnown RBP11.67□□□□□ -0.54
TRIM41-209ENST00000515834 PABPC5Q96DU9 382 aaKnown RBP11.67□□□□□ -0.54
TRIM41-209ENST00000515834 MAN1C1Q9NR34 630 aa11.67□□□□□ -0.54
TRIM41-209ENST00000515834 APOL1O14791 398 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 NDUFB5O43674 189 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 HIST1H2AGP0C0S8 130 aaPredicted RBP11.66□□□□□ -0.54
TRIM41-209ENST00000515834 HIST1H2ADP20671 130 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 FCGRTP55899 365 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 SMAP1Q8IYB5 467 aaPredicted RBP11.66□□□□□ -0.54
TRIM41-209ENST00000515834 VMP1Q96GC9 406 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 HIST1H2AHQ96KK5 128 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 HIST1H2AJQ99878 128 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 H2AFJQ9BTM1 129 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 UBXN8O00124 270 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 NDUFA10O95299 355 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 HMOX2P30519 316 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 SLC8A1P32418 973 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 HAUS6Q7Z4H7 955 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 MTBPQ96DY7 904 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 GJB4Q9NTQ9 266 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 WARS2Q9UGM6 360 aaKnown RBP11.66□□□□□ -0.54
TRIM41-209ENST00000515834 PCDHA10Q9Y5I2 948 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 CFAP74Q9C0B2 1584 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 GFAPP14136 432 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 ADRA2BP18089 450 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 KRT39Q6A163 491 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 GLB1LQ6UWU2 654 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 RNF180Q86T96 592 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 SP8Q8IXZ3 490 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 SNX31Q8N9S9 440 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 MRFAP1L1Q96HT8 127 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 FAM20AQ96MK3 541 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 ZFP42Q96MM3 310 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 INTS2Q9H0H0 1204 aaKnown RBP11.66□□□□□ -0.54
TRIM41-209ENST00000515834 TXLNGQ9NUQ3 528 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 KLHL11Q9NVR0 708 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 SLC25A13Q9UJS0 675 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 SHANK2Q9UPX8 1470 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 C5orf58C9J3I9 102 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 SPAG7O75391 227 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 ETFBP38117 255 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 PDAP1Q13442 181 aaKnown RBP11.66□□□□□ -0.54
TRIM41-209ENST00000515834 NFIXQ14938 502 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 CATSPER3Q86XQ3 398 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 ASAP3Q8TDY4 903 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 NUDT12Q9BQG2 462 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 MXD3Q9BW11 206 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 MED4Q9NPJ6 270 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 RAP1GDS1P52306 607 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 NNTQ13423 1086 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 KRT31Q15323 416 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 PFKFB3Q16875 520 aaPredicted RBP11.66□□□□□ -0.54
TRIM41-209ENST00000515834 TJAP1Q5JTD0 557 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 SPATS2Q86XZ4 545 aaKnown RBP11.66□□□□□ -0.54
TRIM41-209ENST00000515834 ZNF280CQ8ND82 737 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 KDM5CP41229 1560 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 KRT87PA6NCN2 255 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 GFPT1Q06210 699 aaPredicted RBP11.66□□□□□ -0.54
TRIM41-209ENST00000515834 KCNH2Q12809 1159 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 FSCBQ5H9T9 825 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 CYB5R4Q7L1T6 521 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 TBC1D10CQ8IV04 446 aa11.66□□□□□ -0.54
TRIM41-209ENST00000515834 IGSF1Q8N6C5 1336 aa11.65□□□□□ -0.54
TRIM41-209ENST00000515834 RASA4BC9J798 803 aa11.65□□□□□ -0.54
TRIM41-209ENST00000515834 MEFVO15553 781 aaPredicted RBP11.65□□□□□ -0.54
TRIM41-209ENST00000515834 RASA4O43374 803 aa11.65□□□□□ -0.54
TRIM41-209ENST00000515834 ALDH7A1P49419 539 aaKnown RBP11.65□□□□□ -0.54
TRIM41-209ENST00000515834 CHMP1BQ7LBR1 199 aa11.65□□□□□ -0.54
TRIM41-209ENST00000515834 TBC1D1Q86TI0 1168 aaPredicted RBP11.65□□□□□ -0.54
TRIM41-209ENST00000515834 C11orf74Q86VG3 221 aa11.65□□□□□ -0.54
TRIM41-209ENST00000515834 OOSP2Q86WS3 158 aa11.65□□□□□ -0.54
TRIM41-209ENST00000515834 SYT2Q8N9I0 419 aaPredicted RBP11.65□□□□□ -0.54
TRIM41-209ENST00000515834 BTBD6Q96KE9 485 aa11.65□□□□□ -0.54
TRIM41-209ENST00000515834 TMEM161AQ9NX61 479 aa11.65□□□□□ -0.54
TRIM41-209ENST00000515834 ANGPTL2Q9UKU9 493 aa11.65□□□□□ -0.54
TRIM41-209ENST00000515834 MAPK13O15264 365 aa11.65□□□□□ -0.54
TRIM41-209ENST00000515834 MAFGO15525 162 aa11.65□□□□□ -0.54
TRIM41-209ENST00000515834 PYGBP11216 843 aa11.65□□□□□ -0.54
TRIM41-209ENST00000515834 BAATQ14032 418 aaPredicted RBP11.65□□□□□ -0.54
TRIM41-209ENST00000515834 KYAT1Q16773 422 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms