RNA–Protein interactions for RNA: ENST00000515597.1

LINC01088-211, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 1 (best)

Gene LINC01088, Length 664 nt, Biotype antisense RNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-211ENST00000515597 DHCR24Q15392 516 aa5.6□□□□□ -1.51
LINC01088-211ENST00000515597 CCDC178Q5BJE1 867 aa5.6□□□□□ -1.51
LINC01088-211ENST00000515597 TAF7LQ5H9L4 462 aa5.6□□□□□ -1.51
LINC01088-211ENST00000515597 IQSEC1Q6DN90 963 aa5.6□□□□□ -1.51
LINC01088-211ENST00000515597 OLFML1Q6UWY5 402 aa5.6□□□□□ -1.51
LINC01088-211ENST00000515597 FRMD7Q6ZUT3 714 aa5.6□□□□□ -1.51
LINC01088-211ENST00000515597 RNF180Q86T96 592 aa5.6□□□□□ -1.51
LINC01088-211ENST00000515597 THNSL2Q86YJ6 484 aa5.6□□□□□ -1.51
LINC01088-211ENST00000515597 OR10H5Q8NGA6 315 aa5.6□□□□□ -1.51
LINC01088-211ENST00000515597 NTN5Q8WTR8 489 aaPredicted RBP5.6□□□□□ -1.51
LINC01088-211ENST00000515597 LEO1Q8WVC0 666 aaPredicted RBP5.6□□□□□ -1.51
LINC01088-211ENST00000515597 BBC3Q96PG8 261 aaPredicted RBP5.6□□□□□ -1.51
LINC01088-211ENST00000515597 WNT8AQ9H1J5 351 aa5.6□□□□□ -1.51
LINC01088-211ENST00000515597 PPP2R3BQ9Y5P8 575 aa5.6□□□□□ -1.51
LINC01088-211ENST00000515597 NUMBLQ9Y6R0 609 aa5.6□□□□□ -1.51
LINC01088-211ENST00000515597 ZMYM3Q14202 1370 aa5.59□□□□□ -1.51
LINC01088-211ENST00000515597 TMEM200CA6NKL6 621 aa5.59□□□□□ -1.51
LINC01088-211ENST00000515597 NRP2O60462 931 aa5.59□□□□□ -1.51
LINC01088-211ENST00000515597 PRAMEF4O60810 478 aa5.59□□□□□ -1.51
LINC01088-211ENST00000515597 CLEC2LP0C7M8 214 aa5.59□□□□□ -1.51
LINC01088-211ENST00000515597 HSP90B1P14625 803 aaKnown RBP5.59□□□□□ -1.51
LINC01088-211ENST00000515597 MANFP55145 182 aaKnown RBP5.59□□□□□ -1.51
LINC01088-211ENST00000515597 NRG3P56975 720 aa5.59□□□□□ -1.51
LINC01088-211ENST00000515597 NHLH2Q02577 135 aa5.59□□□□□ -1.51
LINC01088-211ENST00000515597 UBE3CQ15386 1083 aa5.59□□□□□ -1.51
LINC01088-211ENST00000515597 DDB1Q16531 1140 aa5.59□□□□□ -1.51
LINC01088-211ENST00000515597 ANKS6Q68DC2 871 aa5.59□□□□□ -1.51
LINC01088-211ENST00000515597 BTNL9Q6UXG8 535 aa5.59□□□□□ -1.51
LINC01088-211ENST00000515597 GPRIN1Q7Z2K8 1008 aa5.59□□□□□ -1.51
LINC01088-211ENST00000515597 ADGRG3Q86Y34 549 aa5.59□□□□□ -1.51
LINC01088-211ENST00000515597 PRDM12Q9H4Q4 367 aa5.59□□□□□ -1.51
LINC01088-211ENST00000515597 USP35Q9P2H5 1018 aa5.59□□□□□ -1.51
LINC01088-211ENST00000515597 EVLQ9UI08 416 aaPredicted RBP5.59□□□□□ -1.51
LINC01088-211ENST00000515597 TMPRSS11EQ9UL52 423 aa5.59□□□□□ -1.51
LINC01088-211ENST00000515597 UNC119BA6NIH7 251 aa5.58□□□□□ -1.52
LINC01088-211ENST00000515597 MASP2O00187 686 aa5.58□□□□□ -1.52
LINC01088-211ENST00000515597 ZNF185O15231 689 aa5.58□□□□□ -1.52
LINC01088-211ENST00000515597 ZSCAN20P17040 1043 aaPredicted RBP5.58□□□□□ -1.52
LINC01088-211ENST00000515597 LMO1P25800 156 aa5.58□□□□□ -1.52
LINC01088-211ENST00000515597 CLK3P49761 638 aaKnown RBP5.58□□□□□ -1.52
LINC01088-211ENST00000515597 HNRNPA0Q13151 305 aaKnown RBP5.58□□□□□ -1.52
LINC01088-211ENST00000515597 BEAN1Q3B7T3 259 aa5.58□□□□□ -1.52
LINC01088-211ENST00000515597 BROXQ5VW32 411 aa5.58□□□□□ -1.52
LINC01088-211ENST00000515597 CCDC62Q6P9F0 684 aa5.58□□□□□ -1.52
LINC01088-211ENST00000515597 RASSF3Q86WH2 238 aa5.58□□□□□ -1.52
LINC01088-211ENST00000515597 SLC41A1Q8IVJ1 513 aa5.58□□□□□ -1.52
LINC01088-211ENST00000515597 GLB1L2Q8IW92 636 aa5.58□□□□□ -1.52
LINC01088-211ENST00000515597 ARHGEF19Q8IW93 802 aa5.58□□□□□ -1.52
LINC01088-211ENST00000515597 CMTR2Q8IYT2 770 aaKnown RBP5.58□□□□□ -1.52
LINC01088-211ENST00000515597 RNF169Q8NCN4 708 aa5.58□□□□□ -1.52
LINC01088-211ENST00000515597 SUPT20HQ8NEM7 779 aa5.58□□□□□ -1.52
LINC01088-211ENST00000515597 RSAD2Q8WXG1 361 aa5.58□□□□□ -1.52
LINC01088-211ENST00000515597 SLC5A5Q92911 643 aa5.58□□□□□ -1.52
LINC01088-211ENST00000515597 DCLRE1CQ96SD1 692 aaKnown RBP5.58□□□□□ -1.52
LINC01088-211ENST00000515597 ANO3Q9BYT9 981 aa5.58□□□□□ -1.52
LINC01088-211ENST00000515597 PRDM13Q9H4Q3 707 aa5.58□□□□□ -1.52
LINC01088-211ENST00000515597 KDM1AO60341 852 aa5.57□□□□□ -1.52
LINC01088-211ENST00000515597 LTA4HP09960 611 aaKnown RBP5.57□□□□□ -1.52
LINC01088-211ENST00000515597 HSD3B2P26439 372 aa5.57□□□□□ -1.52
LINC01088-211ENST00000515597 USP14P54578 494 aa5.57□□□□□ -1.52
LINC01088-211ENST00000515597 APBA1Q02410 837 aa5.57□□□□□ -1.52
LINC01088-211ENST00000515597 TRIM25Q14258 630 aaKnown RBP5.57□□□□□ -1.52
LINC01088-211ENST00000515597 ATP13A4Q4VNC1 1196 aa5.57□□□□□ -1.52
LINC01088-211ENST00000515597 PDCD4Q53EL6 469 aaKnown RBP5.57□□□□□ -1.52
LINC01088-211ENST00000515597 STRIP1Q5VSL9 837 aa5.57□□□□□ -1.52
LINC01088-211ENST00000515597 GIMAP6Q6P9H5 292 aa5.57□□□□□ -1.52
LINC01088-211ENST00000515597 PLXDC1Q8IUK5 500 aa5.57□□□□□ -1.52
LINC01088-211ENST00000515597 LYSMD2Q8IV50 215 aa5.57□□□□□ -1.52
LINC01088-211ENST00000515597 LCORLQ8N3X6 602 aa5.57□□□□□ -1.52
LINC01088-211ENST00000515597 USP7Q93009 1102 aa5.57□□□□□ -1.52
LINC01088-211ENST00000515597 CDC5LQ99459 802 aaKnown RBP5.57□□□□□ -1.52
LINC01088-211ENST00000515597 PRSS50Q9UI38 385 aa5.57□□□□□ -1.52
LINC01088-211ENST00000515597 TMA7Q9Y2S6 64 aaKnown RBP5.57□□□□□ -1.52
LINC01088-211ENST00000515597 GAGE12BA1L429 117 aa5.56□□□□□ -1.52
LINC01088-211ENST00000515597 GAGE12HA6NDE8 117 aa5.56□□□□□ -1.52
LINC01088-211ENST00000515597 ZEB2O60315 1214 aa5.56□□□□□ -1.52
LINC01088-211ENST00000515597 RAB11FIP3O75154 756 aa5.56□□□□□ -1.52
LINC01088-211ENST00000515597 TMEM127O75204 238 aa5.56□□□□□ -1.52
LINC01088-211ENST00000515597 CANXP27824 592 aaKnown RBP5.56□□□□□ -1.52
LINC01088-211ENST00000515597 ABHD15Q6UXT9 468 aa5.56□□□□□ -1.52
LINC01088-211ENST00000515597 CPEB3Q8NE35 698 aaKnown RBP5.56□□□□□ -1.52
LINC01088-211ENST00000515597 MDM1Q8TC05 714 aa5.56□□□□□ -1.52
LINC01088-211ENST00000515597 R3HDMLQ9H3Y0 253 aa5.56□□□□□ -1.52
LINC01088-211ENST00000515597 IFT22Q9H7X7 185 aa5.56□□□□□ -1.52
LINC01088-211ENST00000515597 SYBUQ9NX95 663 aa5.56□□□□□ -1.52
LINC01088-211ENST00000515597 DKK2Q9UBU2 259 aa5.56□□□□□ -1.52
LINC01088-211ENST00000515597 KCNG1Q9UIX4 513 aa5.56□□□□□ -1.52
LINC01088-211ENST00000515597 CLCA2Q9UQC9 943 aa5.56□□□□□ -1.52
LINC01088-211ENST00000515597 ULK1O75385 1050 aa5.55□□□□□ -1.52
LINC01088-211ENST00000515597 ITGA10O75578 1167 aa5.55□□□□□ -1.52
LINC01088-211ENST00000515597 TYRP1P17643 537 aa5.55□□□□□ -1.52
LINC01088-211ENST00000515597 C21orf58P58505 322 aa5.55□□□□□ -1.52
LINC01088-211ENST00000515597 TAP1Q03518 808 aa5.55□□□□□ -1.52
LINC01088-211ENST00000515597 TP53BP2Q13625 1128 aa5.55□□□□□ -1.52
LINC01088-211ENST00000515597 SDE2Q6IQ49 451 aa5.55□□□□□ -1.52
LINC01088-211ENST00000515597 DDX46Q7L014 1031 aaKnown RBP5.55□□□□□ -1.52
LINC01088-211ENST00000515597 TTC1Q99614 292 aa5.55□□□□□ -1.52
LINC01088-211ENST00000515597 ADAM2Q99965 735 aa5.55□□□□□ -1.52
LINC01088-211ENST00000515597 POGKQ9P215 609 aa5.55□□□□□ -1.52
LINC01088-211ENST00000515597 APOBEC2Q9Y235 224 aaKnown RBP5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms