RNA–Protein interactions for RNA: ENST00000515459.5

LMNA-223, Transcript of lamin A/C, humanhuman

TSL 5

Gene LMNA, Length 757 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-223ENST00000515459 NEK8Q86SG6 692 aa17.55■□□□□ 0.4
LMNA-223ENST00000515459 RIN2Q8WYP3 895 aaPredicted RBP17.55■□□□□ 0.4
LMNA-223ENST00000515459 CPB2Q96IY4 423 aa17.55■□□□□ 0.4
LMNA-223ENST00000515459 B3GALT6Q96L58 329 aa17.55■□□□□ 0.4
LMNA-223ENST00000515459 AIFM3Q96NN9 605 aa17.55■□□□□ 0.4
LMNA-223ENST00000515459 MTRQ99707 1265 aa17.55■□□□□ 0.4
LMNA-223ENST00000515459 CSRNP2Q9H175 543 aa17.55■□□□□ 0.4
LMNA-223ENST00000515459 ARHGEF3Q9NR81 526 aa17.55■□□□□ 0.4
LMNA-223ENST00000515459 RGL1Q9NZL6 768 aa17.55■□□□□ 0.4
LMNA-223ENST00000515459 SIT1Q9Y3P8 196 aa17.55■□□□□ 0.4
LMNA-223ENST00000515459 R4GN57 208 aa17.55■□□□□ 0.4
LMNA-223ENST00000515459 INO80B-WBP1J3KQ70 363 aa17.54■□□□□ 0.4
LMNA-223ENST00000515459 TBX3O15119 743 aa17.54■□□□□ 0.4
LMNA-223ENST00000515459 TFDP1Q14186 410 aa17.54■□□□□ 0.4
LMNA-223ENST00000515459 FUT10Q6P4F1 479 aa17.54■□□□□ 0.4
LMNA-223ENST00000515459 GPR65Q8IYL9 337 aa17.54■□□□□ 0.4
LMNA-223ENST00000515459 HACE1Q8IYU2 909 aa17.54■□□□□ 0.4
LMNA-223ENST00000515459 ZNF274Q96GC6 653 aaPredicted RBP17.54■□□□□ 0.4
LMNA-223ENST00000515459 APOL6Q9BWW8 343 aa17.54■□□□□ 0.4
LMNA-223ENST00000515459 PRKD2Q9BZL6 878 aa17.54■□□□□ 0.4
LMNA-223ENST00000515459 TRIM6Q9C030 488 aaPredicted RBP17.54■□□□□ 0.4
LMNA-223ENST00000515459 ZSWIM4Q9H7M6 989 aa17.54■□□□□ 0.4
LMNA-223ENST00000515459 FNIP2Q9P278 1114 aa17.54■□□□□ 0.4
LMNA-223ENST00000515459 GIT1Q9Y2X7 761 aa17.54■□□□□ 0.4
LMNA-223ENST00000515459 FANCMQ8IYD8 2048 aa17.54■□□□□ 0.4
LMNA-223ENST00000515459 ANHXE9PGG2 379 aa17.53■□□□□ 0.4
LMNA-223ENST00000515459 MARCH6O60337 910 aa17.53■□□□□ 0.4
LMNA-223ENST00000515459 CCNT1O60563 726 aaKnown RBP17.53■□□□□ 0.4
LMNA-223ENST00000515459 REC8O95072 547 aa17.53■□□□□ 0.4
LMNA-223ENST00000515459 DCNP07585 359 aaKnown RBP17.53■□□□□ 0.4
LMNA-223ENST00000515459 CREMQ03060 361 aa17.53■□□□□ 0.4
LMNA-223ENST00000515459 POU5F1BQ06416 359 aa17.53■□□□□ 0.4
LMNA-223ENST00000515459 HTR4Q13639 388 aa17.53■□□□□ 0.4
LMNA-223ENST00000515459 LILRA6Q6PI73 481 aa17.53■□□□□ 0.4
LMNA-223ENST00000515459 DCLRE1AQ6PJP8 1040 aa17.53■□□□□ 0.4
LMNA-223ENST00000515459 IFNLR1Q8IU57 520 aaPredicted RBP17.53■□□□□ 0.4
LMNA-223ENST00000515459 GLYCTKQ8IVS8 523 aa17.53■□□□□ 0.4
LMNA-223ENST00000515459 HAS1Q92839 578 aa17.53■□□□□ 0.4
LMNA-223ENST00000515459 DYDC2Q96IM9 177 aa17.53■□□□□ 0.4
LMNA-223ENST00000515459 GPR62Q9BZJ7 368 aa17.53■□□□□ 0.4
LMNA-223ENST00000515459 ZSWIM6Q9HCJ5 1215 aa17.53■□□□□ 0.4
LMNA-223ENST00000515459 SLC2A4RGQ9NR83 387 aa17.53■□□□□ 0.4
LMNA-223ENST00000515459 DLGAP2Q9P1A6 1054 aa17.53■□□□□ 0.4
LMNA-223ENST00000515459 ADAM28Q9UKQ2 775 aa17.53■□□□□ 0.4
LMNA-223ENST00000515459 KCNJ14Q9UNX9 436 aa17.53■□□□□ 0.4
LMNA-223ENST00000515459 ZFP37Q9Y6Q3 630 aaPredicted RBP17.53■□□□□ 0.4
LMNA-223ENST00000515459 NUMBLQ9Y6R0 609 aa17.53■□□□□ 0.4
LMNA-223ENST00000515459 ZNF292O60281 2723 aa17.53■□□□□ 0.4
LMNA-223ENST00000515459 ZBTB39O15060 712 aa17.52■□□□□ 0.4
LMNA-223ENST00000515459 ARF4P18085 180 aaPredicted RBP17.52■□□□□ 0.4
LMNA-223ENST00000515459 CYP4A11Q02928 519 aa17.52■□□□□ 0.4
LMNA-223ENST00000515459 CTTNQ14247 550 aaKnown RBP17.52■□□□□ 0.4
LMNA-223ENST00000515459 NCAPH2Q6IBW4 605 aa17.52■□□□□ 0.4
LMNA-223ENST00000515459 C1orf210Q8IVY1 113 aa17.52■□□□□ 0.4
LMNA-223ENST00000515459 KIAA2013Q8IYS2 634 aa17.52■□□□□ 0.4
LMNA-223ENST00000515459 RMDN1Q96DB5 314 aa17.52■□□□□ 0.4
LMNA-223ENST00000515459 NAP1L4Q99733 375 aaKnown RBP17.52■□□□□ 0.4
LMNA-223ENST00000515459 PHF20Q9BVI0 1012 aa17.52■□□□□ 0.4
LMNA-223ENST00000515459 NXF3Q9H4D5 531 aaKnown RBP17.52■□□□□ 0.4
LMNA-223ENST00000515459 XPNPEP1Q9NQW7 623 aa17.52■□□□□ 0.4
LMNA-223ENST00000515459 MYH15Q9Y2K3 1946 aa17.52■□□□□ 0.4
LMNA-223ENST00000515459 EP300Q09472 2414 aaPredicted RBP17.51■□□□□ 0.39
LMNA-223ENST00000515459 MIA3Q5JRA6 1907 aa17.51■□□□□ 0.39
LMNA-223ENST00000515459 CACNA1AO00555 2505 aa17.51■□□□□ 0.39
LMNA-223ENST00000515459 ZMYND10O75800 440 aa17.51■□□□□ 0.39
LMNA-223ENST00000515459 SP9P0CG40 484 aa17.51■□□□□ 0.39
LMNA-223ENST00000515459 RPL17P18621 184 aaKnown RBP17.51■□□□□ 0.39
LMNA-223ENST00000515459 MBTD1Q05BQ5 628 aa17.51■□□□□ 0.39
LMNA-223ENST00000515459 SPIRE1Q08AE8 756 aa17.51■□□□□ 0.39
LMNA-223ENST00000515459 GRIK3Q13003 919 aa17.51■□□□□ 0.39
LMNA-223ENST00000515459 STK3Q13188 491 aa17.51■□□□□ 0.39
LMNA-223ENST00000515459 POTEGQ6S5H5 508 aa17.51■□□□□ 0.39
LMNA-223ENST00000515459 POTEDQ86YR6 584 aa17.51■□□□□ 0.39
LMNA-223ENST00000515459 TPH2Q8IWU9 490 aa17.51■□□□□ 0.39
LMNA-223ENST00000515459 SLFN12Q8IYM2 578 aa17.51■□□□□ 0.39
LMNA-223ENST00000515459 GSTCDQ8NEC7 633 aa17.51■□□□□ 0.39
LMNA-223ENST00000515459 HINFPQ9BQA5 517 aa17.51■□□□□ 0.39
LMNA-223ENST00000515459 LARP6Q9BRS8 491 aaKnown RBP17.51■□□□□ 0.39
LMNA-223ENST00000515459 CYP46A1Q9Y6A2 500 aa17.51■□□□□ 0.39
LMNA-223ENST00000515459 TADA2AO75478 443 aa17.5■□□□□ 0.39
LMNA-223ENST00000515459 SLITRK3O94933 977 aa17.5■□□□□ 0.39
LMNA-223ENST00000515459 BAG4O95429 457 aaKnown RBP17.5■□□□□ 0.39
LMNA-223ENST00000515459 XBP1P17861 261 aa17.5■□□□□ 0.39
LMNA-223ENST00000515459 FSHRP23945 695 aa17.5■□□□□ 0.39
LMNA-223ENST00000515459 AKAP5P24588 427 aa17.5■□□□□ 0.39
LMNA-223ENST00000515459 STARD6P59095 220 aa17.5■□□□□ 0.39
LMNA-223ENST00000515459 CAPSQ13938 189 aa17.5■□□□□ 0.39
LMNA-223ENST00000515459 AMHR2Q16671 573 aa17.5■□□□□ 0.39
LMNA-223ENST00000515459 PIK3AP1Q6ZUJ8 805 aa17.5■□□□□ 0.39
LMNA-223ENST00000515459 DGLUCYQ7Z3D6 616 aa17.5■□□□□ 0.39
LMNA-223ENST00000515459 PJA1Q8NG27 643 aa17.5■□□□□ 0.39
LMNA-223ENST00000515459 RUBCNQ92622 972 aa17.5■□□□□ 0.39
LMNA-223ENST00000515459 SHDQ96IW2 340 aa17.5■□□□□ 0.39
LMNA-223ENST00000515459 NFKBIZQ9BYH8 718 aa17.5■□□□□ 0.39
LMNA-223ENST00000515459 ZMYM2Q9UBW7 1377 aa17.5■□□□□ 0.39
LMNA-223ENST00000515459 DOCK6Q96HP0 2047 aa17.49■□□□□ 0.39
LMNA-223ENST00000515459 DGAT1O75907 488 aa17.49■□□□□ 0.39
LMNA-223ENST00000515459 HSP90AA2PQ14568 343 aaPredicted RBP17.49■□□□□ 0.39
LMNA-223ENST00000515459 SLC27A1Q6PCB7 646 aa17.49■□□□□ 0.39
LMNA-223ENST00000515459 PRSS55Q6UWB4 352 aaPredicted RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms